Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24770 Brassica napus
A04p01880 Brassica napus
A04p02800 Brassica napus
A04p33260 Brassica napus
A05p04520 Brassica napus
A07p24950 Brassica napus
A09p50830 Brassica napus
A09p52400 Brassica napus
Aa31LG10G14250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2730 Anthoceros agrestis
Ah.13g075870 Amaranthus hybridus
AL4G40510 Arabidopsis lyrata
AL4G43320 Arabidopsis lyrata
AL5G39650 Arabidopsis lyrata
AL5G42290 Arabidopsis lyrata
Aqoxy2G00080 Aquilegia oxysepala
AT2G42140 Arabidopsis thaliana
AT2G44340 Arabidopsis thaliana
AT3G58000 Arabidopsis thaliana
AT3G60090 Arabidopsis thaliana
Atru.chr11.2705 Acer truncatum
Atru.chr8.1107 Acer truncatum
Atru.chr8.1109 Acer truncatum
BcaB01g03318 Brassica carinata
BcaB02g07432 Brassica carinata
BcaB02g08194 Brassica carinata
BcaB02g08283 Brassica carinata
BcaB02g08809 Brassica carinata
BcaB06g29368 Brassica carinata
BcaC01g05174 Brassica carinata
BcaC02g09980 Brassica carinata
BcaC02g10110 Brassica carinata
BcaC02g12321 Brassica carinata
BcaC07g40174 Brassica carinata
BcaC07g40406 Brassica carinata
BcaC07g40529 Brassica carinata
BcaC08g45020 Brassica carinata
BolC3t15303H Brassica oleracea
BolC4t22162H Brassica oleracea
BolC4t22166H Brassica oleracea
BolC4t24831H Brassica oleracea
BolC4t25000H Brassica oleracea
BolC4t28599H Brassica oleracea
BolC6t37815H Brassica oleracea
BolC8t50952H Brassica oleracea
BolC8t51109H Brassica oleracea
BraA03t11684Z Brassica rapa
BraA04t15911Z Brassica rapa
BraA04t16004Z Brassica rapa
BraA04t18787Z Brassica rapa
BraA05t19426Z Brassica rapa
BraA07t30137Z Brassica rapa
BraA09t40529Z Brassica rapa
BraA09t40669Z Brassica rapa
C03p29540 Brassica napus
C04p05210 Brassica napus
C04p05240 Brassica napus
C04p34380 Brassica napus
C04p70960 Brassica napus
C06p26520 Brassica napus
C08p33570 Brassica napus
C08p35140 Brassica napus
CAN.G128.39 Capsicum annuum
CAN.G129.49 Capsicum annuum
CANSAT64G0699 Cannabis sativa
CARHR137200 Cardamine hirsuta
CARHR139500 Cardamine hirsuta
CARHR168320 Cardamine hirsuta
CARHR170400 Cardamine hirsuta
Carub.0004s2448 Capsella rubella
Carub.0004s2692 Capsella rubella
Carub.0005s2484 Capsella rubella
Carub.0005s2682 Capsella rubella
CDE06G1093 Ceratophyllum demersum
CDE07G1938 Ceratophyllum demersum
Cfa010709 Carpinus fangiana
Cfa020167 Carpinus fangiana
Ciclev10013474m.g Citrus clementina
CiPaw.09G030500 Carya illinoinensis
CiPaw.10G026700 Carya illinoinensis
ClCG10G017500 Citrullus lanatus
COL.COLO4_33986 Corchorus olitorius
Cpa.g.sc189.3 Carica papaya
CsaV3_3G038860 Cucumis sativus L.
CSS0036189 Camellia sinensis var. sinensis
DCAR_013546 Daucus carota
DCAR_015713 Daucus carota
DCAR_029592 Daucus carota
Dinv14298 Davidia involucrata
Dinv24074 Davidia involucrata
Dinv43940 Davidia involucrata
Duzib093G0308 Durio zibethinus
Duzib106G0856 Durio zibethinus
Duzib128G0074 Durio zibethinus
ECA247G3561 Erigeron canadensis
EL10Ac3g06919 Beta vulgaris
Eucgr.A02450 Eucalyptus grandis
FAN02G3683 Fragaria x ananassa
FAN09G1280 Fragaria x ananassa
FAN14G0351 Fragaria x ananassa
FAN14G4340 Fragaria x ananassa
FvH4_6g22390 Fragaria vesca
Glyma.08G157900 Glycine max
Glyma.09G111800 Glycine max
Glyma.15G268300 Glycine max
Gohir.1Z049368 Gossypium hirsutum
Gohir.A01G191400 Gossypium hirsutum
Gohir.A04G055700 Gossypium hirsutum
Gohir.D01G178500 Gossypium hirsutum
Gohir.D04G081500 Gossypium hirsutum
Gohir.D09G123966 Gossypium hirsutum
Gorai.002G224500 Gossypium raimondii
Gorai.006G068000 Gossypium raimondii
Gorai.006G142700 Gossypium raimondii
GSVIVG01001356001 Vitis vinifera
GSVIVG01033500001 Vitis vinifera
HanXRQChr10g0289851 Helianthus annuus
Haze_03269 Corylus avellana
Haze_19985 Corylus avellana
Haze_19986 Corylus avellana
Hma1.2p1_0128F.1_g059810 Hydrangea macrophylla
Hma1.2p1_0386F.1_g141860 Hydrangea macrophylla
Hma1.2p1_0541F.1_g174850 Hydrangea macrophylla
Hma1.2p1_0676F.1_g201970 Hydrangea macrophylla
Lalb_Chr20g0108211 Lupinus albus
Lalb_Chr25g0283651 Lupinus albus
Lj3g0026667 Lotus japonicus
Lj5g0000243 Lotus japonicus
Lj9P620T33 Lonicera japonica
Lju124C26T11 Lonicera japonica
Lsat_1_v5_gn_9_26201 Lactuca sativa
Manes.09G035200 Manihot esculenta
Manes.10G152200 Manihot esculenta
MBI01_g01368_MAGBIO Magnolia biondii
MBI04_g33964_MAGBIO Magnolia biondii
MD12G1057500 Malus domestica
MD14G1058100 Malus domestica
Medtr1g054055 Medicago truncatula
Medtr2g061720 Medicago truncatula
MELO3C009629.2 Cucumis melo
Migut.B01401 Erythranthe guttata
Migut.J01831 Erythranthe guttata
Migut.N01656 Erythranthe guttata
Nn2g15676 Nelumbo nucifera
Nn7g36011 Nelumbo nucifera
Oeu024480.1 Olea europaea
Oeu024934.1 Olea europaea
Oeu032786.1 Olea europaea
Oeu033738.1 Olea europaea
Oeu041513.1 Olea europaea
Oeu060702.1 Olea europaea
Os04g0665900 Oryza sativa ssp. japonica
Os06g0618700 Oryza sativa ssp. japonica
PGR004G2754 Punica granatum
PGR142G2221 Punica granatum
PGSC0003DMG400023709 Solanum tuberosum
PGSC0003DMG400028983 Solanum tuberosum
Phvul.005G042100 Phaseolus vulgaris
Phvul.007G259600 Phaseolus vulgaris
Potri.001G230800 Populus trichocarpa
Potri.006G192100 Populus trichocarpa
Potri.009G024200 Populus trichocarpa
Potri.016G046000 Populus trichocarpa
Prupe.2G002600 Prunus persica
Prupe.7G076600 Prunus persica
Psat1g128960 Pisum sativum
Psat6g124440 Pisum sativum
PSO339G2298 Papaver somniferum
PSO384G0475 Papaver somniferum
QL04p001561 Quercus lobata
QL07p023704 Quercus lobata
RcHm_v2.0_Chr3g0479721 Rosa chinensis
Rhsim03G0006200 Rhododendron simsii
Sabra06G0147200 Salix brachista
Sabra09G0015600 Salix brachista
Sabra16G0050100 Salix brachista
Sabra16G0138200 Salix brachista
SalBow5G3544 Salvia bowleyana
SalBow6G1610 Salvia bowleyana
SalBow6G2667 Salvia bowleyana
SalBow6G3635 Salvia bowleyana
SalBow6G4220 Salvia bowleyana
Sc13g0002270 Simmondsia chinensis
Sc19g0007090 Simmondsia chinensis
Sed0021075 Sechium edule
Sed0026082 Sechium edule
SGA_v2.0_scaffold260G45885 Striga asiatica
SGA_v2.0_scaffold274G46484 Striga asiatica
SHI27265 Sapria himalayana
Sopen01g033330 Solanum pennellii
Sopen10g031030 Solanum pennellii
Sp4g26400 Schrenkiella parvula
Sp5g03120 Schrenkiella parvula
Sp5g04720 Schrenkiella parvula
TAR623G0313 Trochodendron aralioides
TAR633G0631 Trochodendron aralioides
TAR633G2208 Trochodendron aralioides
TAR636G0094 Trochodendron aralioides
THA.LOC104802519 Tarenaya hassleriana
THA.LOC104802532 Tarenaya hassleriana
THA.LOC104817149 Tarenaya hassleriana
THA.LOC104824473 Tarenaya hassleriana
THA.LOC104827575 Tarenaya hassleriana
Thecc.05G171100 Theobroma cacao
Thhalv10001743m.g Eutrema salsugineum
Thhalv10006263m.g Eutrema salsugineum
Thhalv10006454m.g Eutrema salsugineum
Thhalv10017963m.g Eutrema salsugineum
TPR.G104 Trifolium pratense
TPR.G16156 Trifolium pratense
TPR.G40275 Trifolium pratense
TWI09G0195 Tripterygium wilfordii
TWI74G1180 Tripterygium wilfordii
TWI77G0731 Tripterygium wilfordii
vmacro07909 Vaccinium macrocarpon
VMungo0720G0553 Vigna mungo
VMungo1080G1532 Vigna mungo
Zm00001eb067140 Zea mays
Zm00001eb275700 Zea mays
Zm00001eb275710 Zea mays
Zm00001eb388100 Zea mays

User provided reference genes

Program Settings