Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37110 Brassica napus
A04p11600 Brassica napus
A06p39640 Brassica napus
A09p04220 Brassica napus
Aa31LG2G3670 Aethionema arabicum
Aa31LG9G16940 Aethionema arabicum
Actinidia17623 Actinidia chinensis
Actinidia18108 Actinidia chinensis
Actinidia36293 Actinidia chinensis
Ah.10g037430 Amaranthus hybridus
Ah.16g102140 Amaranthus hybridus
AL5G20420 Arabidopsis lyrata
AL7G51740 Arabidopsis lyrata
Aqoxy3G00625 Aquilegia oxysepala
Aqoxy3G00626 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BRNL8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F4PGJ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9SN56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WK1M58 Arachis hypogaea
AT3G30775 Arabidopsis thaliana
AT5G38710 Arabidopsis thaliana
ATR0691G082 Amborella trichopoda
Atru.chr8.783 Acer truncatum
AUR62014562 Chenopodium quinoa
AUR62039398 Chenopodium quinoa
BcaB04g19530 Brassica carinata
BcaB06g27238 Brassica carinata
BcaB07g30058 Brassica carinata
BcaB07g30059 Brassica carinata
BcaC02g09664 Brassica carinata
BcaC04g23809 Brassica carinata
BcaC06g30840 Brassica carinata
BcaC06g33729 Brassica carinata
BolC2t11668H Brassica oleracea
BolC4t26115H Brassica oleracea
BolC7t44386H Brassica oleracea
BolC9t53376H Brassica oleracea
BraA02t08697Z Brassica rapa
BraA04t16827Z Brassica rapa
BraA06t26879Z Brassica rapa
BraA09t36059Z Brassica rapa
C02p56110 Brassica napus
C04p45330 Brassica napus
C07p38660 Brassica napus
C09p04450 Brassica napus
CAN.G497.22 Capsicum annuum
CAN.G497.23 Capsicum annuum
CARHR153560 Cardamine hirsuta
CARHR288760 Cardamine hirsuta
Carub.0005s0874 Capsella rubella
Carub.0007s3715 Capsella rubella
Ca_06719_v3 Cicer arietinum L.
Ca_20735_v3 Cicer arietinum L.
Ca_20737_v3 Cicer arietinum L.
Ca_20738_v3 Cicer arietinum L.
CBR_g41282 Chara braunii
Cc07_g04870 Coffea canephora
CDE01G0074 Ceratophyllum demersum
CDE02G4570 Ceratophyllum demersum
Cfa007989 Carpinus fangiana
Cfa023695 Carpinus fangiana
Ciclev10011584m.g Citrus clementina
CiPaw.03G007100 Carya illinoinensis
CiPaw.04G005000 Carya illinoinensis
ClCG11G005180 Citrullus lanatus
COL.COLO4_22349 Corchorus olitorius
Cpa.g.sc652.4 Carica papaya
Cre01.g036850 Chlamydomonas reinhardtii
Cre16.g648350 Chlamydomonas reinhardtii
CsaV3_5G038920 Cucumis sativus L.
CSS0002548 Camellia sinensis var. sinensis
CSS0003182 Camellia sinensis var. sinensis
DCAR_007529 Daucus carota
DCAR_007530 Daucus carota
DCAR_010985 Daucus carota
Dinv33903 Davidia involucrata
Dinv34874 Davidia involucrata
Duzib138G1201 Durio zibethinus
ECA232G0384 Erigeron canadensis
ECA238G4761 Erigeron canadensis
ECA246G4196 Erigeron canadensis
EL10Ac2g04654 Beta vulgaris
Eucgr.J01449 Eucalyptus grandis
FAN02G4344 Fragaria x ananassa
FAN05G4727 Fragaria x ananassa
FAN09G0679 Fragaria x ananassa
FAN14G4550 Fragaria x ananassa
FvH4_6g45730 Fragaria vesca
Glyma.08G255900 Glycine max
Glyma.13G049700 Glycine max
Glyma.18G278900 Glycine max
Glyma.19G042900 Glycine max
Glyma.19G043000 Glycine max
Gohir.A07G176300 Gossypium hirsutum
Gohir.A08G035400 Gossypium hirsutum
Gohir.A11G167900 Gossypium hirsutum
Gohir.D07G183400 Gossypium hirsutum
Gohir.D08G046100 Gossypium hirsutum
Gohir.D11G174200 Gossypium hirsutum
Gorai.001G203800 Gossypium raimondii
Gorai.004G045300 Gossypium raimondii
Gorai.007G186600 Gossypium raimondii
GSVIVG01036483001 Vitis vinifera
HanXRQChr08g0211401 Helianthus annuus
HanXRQChr09g0263361 Helianthus annuus
HanXRQChr12g0380861 Helianthus annuus
HanXRQChr14g0439411 Helianthus annuus
HanXRQChr14g0448061 Helianthus annuus
Haze_14085 Corylus avellana
Haze_26678 Corylus avellana
Hma1.2p1_0588F.1_g184460 Hydrangea macrophylla
HPP92_022563 Vanilla planifolia
Hund13746 Selenicereus undatus
Lalb_Chr02g0158481 Lupinus albus
Lalb_Chr04g0258211 Lupinus albus
Lalb_Chr10g0092411 Lupinus albus
Lalb_Chr10g0092421 Lupinus albus
Lalb_Chr21g0318041 Lupinus albus
Lj1g0011783 Lotus japonicus
Lj2g0003797 Lotus japonicus
Lj4A128T78 Lonicera japonica
Lj7C7T10 Lonicera japonica
Lju237C1T7 Lonicera japonica
Lsat_1_v5_gn_2_86240 Lactuca sativa
Lsat_1_v5_gn_3_94760 Lactuca sativa
Lsat_1_v5_gn_4_175400 Lactuca sativa
Manes.02G063900 Manihot esculenta
Mapoly0001s0130 Marchantia polymorpha
MBI14_g13656_MAGBIO Magnolia biondii
MBI14_g41835_MAGBIO Magnolia biondii
MD09G1080200 Malus domestica
MD17G1070700 Malus domestica
MD17G1206300 Malus domestica
Medtr6g016635 Medicago truncatula
Medtr6g016640 Medicago truncatula
Medtr6g016650 Medicago truncatula
Medtr7g020820 Medicago truncatula
MELO3C022076.2 Cucumis melo
Migut.H00556 Erythranthe guttata
Migut.K00871 Erythranthe guttata
MSTRG.15423 Avicennia marina
MSTRG.23839 Avicennia marina
MSTRG.2953 Avicennia marina
Nitab4.5_0001982g0070 Nicotiana tabacum
Nitab4.5_0001982g0120 Nicotiana tabacum
Nitab4.5_0006224g0010 Nicotiana tabacum
Nitab4.5_0006224g0020 Nicotiana tabacum
Nn1g00128 Nelumbo nucifera
Nn3g17619 Nelumbo nucifera
Nn4g23624 Nelumbo nucifera
Oeu032863.1 Olea europaea
Os10g0550900 Oryza sativa ssp. japonica
Peaxi162Scf01056g00029 Petunia axillaris
Peaxi162Scf01056g00030 Petunia axillaris
PGR042G3308 Punica granatum
PGSC0003DMG400010050 Solanum tuberosum
Phvul.002G300800 Phaseolus vulgaris
Phvul.004G047900 Phaseolus vulgaris
Phvul.008G022000 Phaseolus vulgaris
Potri.004G106400 Populus trichocarpa
Potri.017G109300 Populus trichocarpa
Pp3c16_2800 Physcomitrium patens
Pp3c17_4560 Physcomitrium patens
Pp3c5_9640 Physcomitrium patens
Prupe.3G243500 Prunus persica
Psat1g063160 Pisum sativum
Psat3g191960 Pisum sativum
PSO017G0749 Papaver somniferum
PSO017G1960 Papaver somniferum
PSO017G5592 Papaver somniferum
PSO478G3282 Papaver somniferum
PSO478G4281 Papaver somniferum
PSO478G4760 Papaver somniferum
QL02p053864 Quercus lobata
QL02p054262 Quercus lobata
QL05p067729 Quercus lobata
RcHm_v2.0_Chr2g0163921 Rosa chinensis
Rhsim08G0080700 Rhododendron simsii
Rhsim10G0062800 Rhododendron simsii
Sabra04G0075700 Salix brachista
Sabra17G0091600 Salix brachista
SalBow1G1096 Salvia bowleyana
SalBow1G4995 Salvia bowleyana
SalBow1G6719 Salvia bowleyana
Sc10g0001470 Simmondsia chinensis
Sed0007198 Sechium edule
Sed0012021 Sechium edule
SEGI_03651 Sequoiadendron giganteum
SEGI_12591 Sequoiadendron giganteum
SEGI_34483 Sequoiadendron giganteum
SEGI_38529 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00268 Striga asiatica
SGA_v2.0_scaffold52G19026 Striga asiatica
SMO143G0150 Selaginella moellendorffii
Solyc02g089620.3 Solanum lycopersicum
Solyc02g089630.3 Solanum lycopersicum
Sopen02g034350 Solanum pennellii
Sopen02g034360 Solanum pennellii
Sp2g18240 Schrenkiella parvula
Sp7g03210 Schrenkiella parvula
TAR629G2407 Trochodendron aralioides
THA.LOC104805545 Tarenaya hassleriana
THA.LOC104823874 Tarenaya hassleriana
Thecc.04G145400 Theobroma cacao
Thhalv10004065m.g Eutrema salsugineum
Thhalv10027738m.g Eutrema salsugineum
TPR.G27153 Trifolium pratense
TPR.G3277 Trifolium pratense
TWI34G1036 Tripterygium wilfordii
TWI60G1043 Tripterygium wilfordii
unitig_52.g17626 Utricularia gibba
unitig_62.g23396 Utricularia gibba
vmacro05594 Vaccinium macrocarpon
vmacro18095 Vaccinium macrocarpon
VMungo0251G0419 Vigna mungo
VMungo0464G0582 Vigna mungo
VMungo0720G2851 Vigna mungo
VMungo1383G1169 Vigna mungo
VMungo1383G1643 Vigna mungo
Zm00001eb022980 Zea mays
Zm00001eb391720 Zea mays

User provided reference genes

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