Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48610 Brassica napus
A09p58070 Brassica napus
Aa31LG6G16010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.441 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.860 Anthoceros agrestis
Actinidia01212 Actinidia chinensis
Actinidia24323 Actinidia chinensis
Ah.01g019350 Amaranthus hybridus
AL2G19020 Arabidopsis lyrata
AL3G16190 Arabidopsis lyrata
AL4G10840 Arabidopsis lyrata
AL7G11210 Arabidopsis lyrata
Aqoxy1G01518 Aquilegia oxysepala
Aqoxy4G03239 Aquilegia oxysepala
Aqoxy5G01623 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7U3W9V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86RK4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JCZ0SG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LUC5KR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PX0JLD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RU14FQ Arachis hypogaea
AT2G21640 Arabidopsis thaliana
AT3G05570 Arabidopsis thaliana
AT4G39235 Arabidopsis thaliana
ATR0564G142 Amborella trichopoda
Atru.chr5.3024 Acer truncatum
AUR62011312 Chenopodium quinoa
AUR62016742 Chenopodium quinoa
AUR62020660 Chenopodium quinoa
AUR62028069 Chenopodium quinoa
AUR62044391 Chenopodium quinoa
BcaB08g34990 Brassica carinata
BcaC05g30110 Brassica carinata
BcaC05g30157 Brassica carinata
BcaNung02347 Brassica carinata
BcaNung03882 Brassica carinata
BolC5t34824H Brassica oleracea
BraA05t22960Z Brassica rapa
BraA06t27729Z Brassica rapa
BraA09t41195Z Brassica rapa
C05p61660 Brassica napus
C07p63280 Brassica napus
C08p41320 Brassica napus
CAN.G1412.13 Capsicum annuum
CAN.G199.70 Capsicum annuum
CANSAT56G0597 Cannabis sativa
CARHR079980 Cardamine hirsuta
CARHR112630 Cardamine hirsuta
CARHR247460 Cardamine hirsuta
Carub.0003s0488 Capsella rubella
Carub.0004s0067 Capsella rubella
Carub.0007s0115 Capsella rubella
Ca_09910_v3 Cicer arietinum L.
Ca_09914_v3 Cicer arietinum L.
Ca_14242_v3 Cicer arietinum L.
Cc02_g17490 Coffea canephora
Cc08_g00150 Coffea canephora
CDE01G0165 Ceratophyllum demersum
CDE01G0538 Ceratophyllum demersum
CDE09G0501 Ceratophyllum demersum
Cfa004991 Carpinus fangiana
Ciclev10023076m.g Citrus clementina
Ciclev10029652m.g Citrus clementina
CiPaw.05G085100 Carya illinoinensis
ClCG11G004390 Citrullus lanatus
COL.COLO4_22074 Corchorus olitorius
Cpa.g.sc62.158 Carica papaya
CsaV3_2G014720 Cucumis sativus L.
CSS0000040 Camellia sinensis var. sinensis
CSS0012804 Camellia sinensis var. sinensis
CSS0033942 Camellia sinensis var. sinensis
CSS0043820 Camellia sinensis var. sinensis
CSS0048455 Camellia sinensis var. sinensis
DCAR_001537 Daucus carota
DCAR_003668 Daucus carota
DCAR_028980 Daucus carota
Dinv23514 Davidia involucrata
Dinv42060 Davidia involucrata
Duzib264G0230 Durio zibethinus
ECA234G3955 Erigeron canadensis
ECA236G4459 Erigeron canadensis
EL10Ac2g03674 Beta vulgaris
Eucgr.G01659 Eucalyptus grandis
Eucgr.I01274 Eucalyptus grandis
FAN15G0555 Fragaria x ananassa
FAN15G0806 Fragaria x ananassa
FAN15G1685 Fragaria x ananassa
FAN19G1926 Fragaria x ananassa
FAN20G0734 Fragaria x ananassa
FAN23G2538 Fragaria x ananassa
FAN24G2144 Fragaria x ananassa
FAN26G1671 Fragaria x ananassa
FAN27G2550 Fragaria x ananassa
FAN28G1491 Fragaria x ananassa
FvH4_1g13270 Fragaria vesca
FvH4_2g08920 Fragaria vesca
FvH4_4g27401 Fragaria vesca
Glyma.01G176200 Glycine max
Glyma.02G157900 Glycine max
Glyma.04G132300 Glycine max
Glyma.06G309100 Glycine max
Glyma.11G068401 Glycine max
Gohir.A13G009200 Gossypium hirsutum
Gohir.A13G067200 Gossypium hirsutum
Gohir.D13G009900 Gossypium hirsutum
Gohir.D13G054400 Gossypium hirsutum
Gorai.013G010600 Gossypium raimondii
Gorai.013G061200 Gossypium raimondii
GSVIVG01031976001 Vitis vinifera
HanXRQChr04g0128031 Helianthus annuus
HanXRQChr10g0306021 Helianthus annuus
Haze_01901 Corylus avellana
Haze_01902 Corylus avellana
Haze_02394 Corylus avellana
Hma1.2p1_0098F.1_g048145 Hydrangea macrophylla
HPP92_014011 Vanilla planifolia
HPP92_020550 Vanilla planifolia
Hund03256 Selenicereus undatus
Hund06238 Selenicereus undatus
Lalb_Chr16g0377821 Lupinus albus
Lalb_Chr19g0128111 Lupinus albus
Lalb_Chr19g0128121 Lupinus albus
Lalb_Chr25g0280921 Lupinus albus
Lj2g0002055 Lotus japonicus
Lj4g0025197 Lotus japonicus
LjContig00049g0022514 Lotus japonicus
Lsat_1_v5_gn_5_117800 Lactuca sativa
Lsat_1_v5_gn_7_91140 Lactuca sativa
Manes.17G101700 Manihot esculenta
Mapoly0087s0019 Marchantia polymorpha
MBI05_g05282_MAGBIO Magnolia biondii
MD02G1147100 Malus domestica
MD05G1065400 Malus domestica
MD10G1075100 Malus domestica
MD15G1261200 Malus domestica
Medtr1g052680 Medicago truncatula
Medtr3g013450 Medicago truncatula
Medtr4g071690 Medicago truncatula
Medtr5g020180 Medicago truncatula
MELO3C023293.2 Cucumis melo
Migut.N02616 Erythranthe guttata
Nitab4.5_0000308g0180 Nicotiana tabacum
Nitab4.5_0002503g0080 Nicotiana tabacum
Nitab4.5_0003811g0120 Nicotiana tabacum
Nitab4.5_0011729g0020 Nicotiana tabacum
Nn1g04978 Nelumbo nucifera
Nn5g29621 Nelumbo nucifera
Oeu055590.1 Olea europaea
Oeu055595.1 Olea europaea
Oeu061208.1 Olea europaea
Os02g0696650 Oryza sativa ssp. japonica
Os03g0724500 Oryza sativa ssp. japonica
Os08g0204632 Oryza sativa ssp. japonica
Os10g0557800 Oryza sativa ssp. japonica
Peaxi162Scf00016g00073 Petunia axillaris
Peaxi162Scf00430g00215 Petunia axillaris
PGR042G0984 Punica granatum
PGR119G1136 Punica granatum
PGSC0003DMG400000729 Solanum tuberosum
PGSC0003DMG400026137 Solanum tuberosum
Phvul.002G030500 Phaseolus vulgaris
Phvul.005G018400 Phaseolus vulgaris
Phvul.007G250700 Phaseolus vulgaris
Potri.002G057100 Populus trichocarpa
Potri.004G155500 Populus trichocarpa
Potri.005G205500 Populus trichocarpa
Pp3c12_14760 Physcomitrium patens
Prupe.7G155100 Prunus persica
Prupe.8G064900 Prunus persica
Prupe.8G096200 Prunus persica
Psat2g159640 Pisum sativum
Psat5g223200 Pisum sativum
PSO676G0010 Papaver somniferum
PSO700G0195 Papaver somniferum
QL01p053044 Quercus lobata
QL01p053074 Quercus lobata
QL06p046206 Quercus lobata
QL09p041665 Quercus lobata
QL10p007071 Quercus lobata
QL11p043988 Quercus lobata
RcHm_v2.0_Chr2g0101511 Rosa chinensis
RcHm_v2.0_Chr4g0435221 Rosa chinensis
RcHm_v2.0_Chr6g0264531 Rosa chinensis
Rhsim08G0117400 Rhododendron simsii
Rhsim11G0048900 Rhododendron simsii
Sabra02G0046500 Salix brachista
Sabra04G0103300 Salix brachista
Sabra05G0156200 Salix brachista
SalBow3G4023 Salvia bowleyana
SalBow6G1740 Salvia bowleyana
Sc20g0006190 Simmondsia chinensis
Sed0008972 Sechium edule
SEGI_39866 Sequoiadendron giganteum
Solyc01g109680.3 Solanum lycopersicum
Solyc06g150128.1 Solanum lycopersicum
Sopen01g051870 Solanum pennellii
Sopen06g024310 Solanum pennellii
Sp3g04420 Schrenkiella parvula
Sp4g00800 Schrenkiella parvula
Sp7g36600 Schrenkiella parvula
TAR376G0670 Trochodendron aralioides
TAR381G1321 Trochodendron aralioides
THA.LOC104804132 Tarenaya hassleriana
THA.LOC104824821 Tarenaya hassleriana
Thecc.01G149400 Theobroma cacao
Thhalv10000397m.g Eutrema salsugineum
Thhalv10021849m.g Eutrema salsugineum
Thhalv10026620m.g Eutrema salsugineum
TPR.G22287 Trifolium pratense
TPR.G39995 Trifolium pratense
TWI31G0443 Tripterygium wilfordii
TWI74G0449 Tripterygium wilfordii
TWI79G1173 Tripterygium wilfordii
unitig_27.g25061 Utricularia gibba
unitig_699.g19197 Utricularia gibba
vmacro00179 Vaccinium macrocarpon
vmacro17487 Vaccinium macrocarpon
Zm00001eb016400 Zea mays
Zm00001eb023290 Zea mays
Zm00001eb055770 Zea mays
Zm00001eb161730 Zea mays
Zm00001eb295790 Zea mays

User provided reference genes

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