Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33230 Brassica napus
A06p43280 Brassica napus
A09p24090 Brassica napus
Aa31LG10G9280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3527 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4142 Anthoceros agrestis
Actinidia06957 Actinidia chinensis
Actinidia11659 Actinidia chinensis
Actinidia23988 Actinidia chinensis
Ah.04g161990 Amaranthus hybridus
AL5G12770 Arabidopsis lyrata
Aqoxy2G00365 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Z0DIR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3D8JLU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.APBA8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FN8MRX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5V5GF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IEZM4M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VUH5K0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y550S7 Arachis hypogaea
AT2G03120 Arabidopsis thaliana
ATR0580G276 Amborella trichopoda
Atru.chr3.2779 Acer truncatum
AUR62000182 Chenopodium quinoa
AUR62006534 Chenopodium quinoa
BcaB07g30310 Brassica carinata
BcaB07g30686 Brassica carinata
BcaC03g17184 Brassica carinata
BcaC04g21506 Brassica carinata
BcaC06g31199 Brassica carinata
BcaC06g34018 Brassica carinata
BolC2t11200H Brassica oleracea
BolC7t43877H Brassica oleracea
BolC9t55957H Brassica oleracea
BraA02t08347Z Brassica rapa
BraA06t27214Z Brassica rapa
BraA09t38009Z Brassica rapa
C02p51130 Brassica napus
C07p33670 Brassica napus
C09p30980 Brassica napus
CAN.G917.5 Capsicum annuum
CAN.G96.11 Capsicum annuum
CANSAT25G3396 Cannabis sativa
CARHR145460 Cardamine hirsuta
Carub.0005s0195 Capsella rubella
Ca_12800_v3 Cicer arietinum L.
Ca_12810_v3 Cicer arietinum L.
Ca_15619_v3 Cicer arietinum L.
CBR_g39566 Chara braunii
Cc00_g28510 Coffea canephora
Cc00_g32870 Coffea canephora
Cc01_g05530 Coffea canephora
Cc01_g06220 Coffea canephora
Cc03_g10790 Coffea canephora
Cc03_g13830 Coffea canephora
Cc06_g12750 Coffea canephora
CDE02G3432 Ceratophyllum demersum
CDE06G0965 Ceratophyllum demersum
Cfa013345 Carpinus fangiana
Cfa027050 Carpinus fangiana
Ciclev10015833m.g Citrus clementina
CiPaw.07G207100 Carya illinoinensis
CiPaw.08G023500 Carya illinoinensis
ClCG11G014020 Citrullus lanatus
COL.COLO4_05198 Corchorus olitorius
Cpa.g.c45617 Carica papaya
Cpa.g.sc84.1 Carica papaya
Cre07.g332550 Chlamydomonas reinhardtii
Cre14.g617300 Chlamydomonas reinhardtii
CsaV3_3G047430 Cucumis sativus L.
CSS0001188 Camellia sinensis var. sinensis
CSS0007409 Camellia sinensis var. sinensis
CSS0031638 Camellia sinensis var. sinensis
CSS0037821 Camellia sinensis var. sinensis
DCAR_002102 Daucus carota
DCAR_029992 Daucus carota
DCAR_031257 Daucus carota
DCAR_031258 Daucus carota
DCAR_031667 Daucus carota
Dinv05057 Davidia involucrata
Dinv36179 Davidia involucrata
Duzib150G1361 Durio zibethinus
Duzib168G2072 Durio zibethinus
Duzib170G0109 Durio zibethinus
ECA232G2856 Erigeron canadensis
ECA233G4335 Erigeron canadensis
EL10Ac4g10135 Beta vulgaris
EL10Ac4g10152 Beta vulgaris
Eucgr.J00700 Eucalyptus grandis
FAN15G0484 Fragaria x ananassa
FAN20G1214 Fragaria x ananassa
FAN27G0636 Fragaria x ananassa
FvH4_2g36110 Fragaria vesca
Glyma.04G080200 Glycine max
Glyma.06G081900 Glycine max
Glyma.14G142100 Glycine max
Gohir.A05G071500 Gossypium hirsutum
Gohir.A07G120600 Gossypium hirsutum
Gohir.A13G219200 Gossypium hirsutum
Gohir.D05G074400 Gossypium hirsutum
Gohir.D07G124800 Gossypium hirsutum
Gohir.D10G151000 Gossypium hirsutum
Gohir.D13G222900 Gossypium hirsutum
Gohir.D13G223001 Gossypium hirsutum
Gohir.D13G223201 Gossypium hirsutum
Gorai.001G134600 Gossypium raimondii
Gorai.009G075500 Gossypium raimondii
Gorai.013G254000 Gossypium raimondii
GSVIVG01037261001 Vitis vinifera
HanXRQChr08g0216751 Helianthus annuus
HanXRQChr13g0388471 Helianthus annuus
Haze_21852 Corylus avellana
Haze_21853 Corylus avellana
Haze_26116 Corylus avellana
Hma1.2p1_0129F.1_g060120 Hydrangea macrophylla
HPP92_020481 Vanilla planifolia
Hund07443 Selenicereus undatus
Hund21985 Selenicereus undatus
Lalb_Chr08g0243271 Lupinus albus
Lalb_Chr11g0064331 Lupinus albus
Lalb_Chr11g0064341 Lupinus albus
Lalb_Chr23g0269441 Lupinus albus
Lj1C287G1 Lonicera japonica
Lj1g0011096 Lotus japonicus
Lsat_1_v5_gn_8_26901 Lactuca sativa
Lsat_1_v5_gn_9_48160 Lactuca sativa
Manes.01G179800 Manihot esculenta
Manes.02G140400 Manihot esculenta
Mapoly0057s0081 Marchantia polymorpha
Mapoly0108s0004 Marchantia polymorpha
Mapoly0110s0052 Marchantia polymorpha
MBI13_g30131_MAGBIO Magnolia biondii
MBI19_g08870_MAGBIO Magnolia biondii
MBI19_g22255_MAGBIO Magnolia biondii
MD08G1118300 Malus domestica
MD15G1097600 Malus domestica
Medtr1g008280 Medicago truncatula
Medtr3g109932 Medicago truncatula
Medtr3g109968 Medicago truncatula
Medtr5g031710 Medicago truncatula
MELO3C003581.2 Cucumis melo
MELO3C034374.2 Cucumis melo
Migut.D00654 Erythranthe guttata
Migut.N02369 Erythranthe guttata
MSTRG.12444 Avicennia marina
MSTRG.12446 Avicennia marina
MSTRG.17631 Avicennia marina
Nitab4.5_0000718g0270 Nicotiana tabacum
Nitab4.5_0000730g0130 Nicotiana tabacum
Nitab4.5_0001500g0090 Nicotiana tabacum
Nitab4.5_0005212g0030 Nicotiana tabacum
Nn2g14838 Nelumbo nucifera
Nn7g36666 Nelumbo nucifera
Oeu025901.1 Olea europaea
Oeu039575.1 Olea europaea
Oeu043280.2 Olea europaea
Os02g0117400 Oryza sativa ssp. japonica
Os02g0825600 Oryza sativa ssp. japonica
Os05g0436400 Oryza sativa ssp. japonica
Peaxi162Scf00004g04618 Petunia axillaris
Peaxi162Scf00032g02617 Petunia axillaris
PGR054G0002 Punica granatum
PGR119G0724 Punica granatum
PGSC0003DMG400009454 Solanum tuberosum
PGSC0003DMG400022714 Solanum tuberosum
Phvul.009G106300 Phaseolus vulgaris
Potri.001G276700 Populus trichocarpa
Potri.009G071600 Populus trichocarpa
Pp3c3_24000 Physcomitrium patens
Pp3c3_24020 Physcomitrium patens
Pp3c3_4970 Physcomitrium patens
Pp3c4_28860 Physcomitrium patens
PRCOL_00004103 Prasinoderma coloniale
PRCOL_00004266 Prasinoderma coloniale
Prupe.1G452500 Prunus persica
Psat0s3378g0040 Pisum sativum
Psat6g034320 Pisum sativum
PSO063G2975 Papaver somniferum
PSO063G4727 Papaver somniferum
PSO339G4627 Papaver somniferum
PSO384G1550 Papaver somniferum
QL12p026400 Quercus lobata
RcHm_v2.0_Chr6g0305761 Rosa chinensis
Rhsim01G0194700 Rhododendron simsii
Rhsim13G0211100 Rhododendron simsii
Sabra09G0053900 Salix brachista
Sc16g0011120 Simmondsia chinensis
Sc16g0011130 Simmondsia chinensis
Sed0002878 Sechium edule
Sed0016432 Sechium edule
SEGI_04401 Sequoiadendron giganteum
SEGI_08466 Sequoiadendron giganteum
SEGI_16507 Sequoiadendron giganteum
SEGI_37865 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12260 Striga asiatica
SGA_v2.0_scaffold496G52467 Striga asiatica
SMO172G0078 Selaginella moellendorffii
SMO232G0043 Selaginella moellendorffii
Solyc01g008820.3 Solanum lycopersicum
Solyc11g064790.2 Solanum lycopersicum
Sopen01g004330 Solanum pennellii
Sopen11g024530 Solanum pennellii
Sp2g14090 Schrenkiella parvula
TAR369G0586 Trochodendron aralioides
TAR623G1108 Trochodendron aralioides
TAR633G0445 Trochodendron aralioides
THA.LOC104816927 Tarenaya hassleriana
THA.LOC104826452 Tarenaya hassleriana
Thecc.09G249800 Theobroma cacao
Thhalv10004551m.g Eutrema salsugineum
TPR.G12114 Trifolium pratense
TPR.G1379 Trifolium pratense
TPR.G30556 Trifolium pratense
TPR.G30569 Trifolium pratense
TWI34G0762 Tripterygium wilfordii
TWI60G1477 Tripterygium wilfordii
unitig_27.g25006 Utricularia gibba
vmacro04023 Vaccinium macrocarpon
VMungo0720G1736 Vigna mungo
VMungo1309G1449 Vigna mungo
Zm00001eb209380 Zea mays
Zm00001eb230050 Zea mays

User provided reference genes

Program Settings