Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26470 Brassica napus
A03p29280 Brassica napus
A03p54930 Brassica napus
A09p28400 Brassica napus
Aa31LG9G11270 Aethionema arabicum
Actinidia07974 Actinidia chinensis
Actinidia18664 Actinidia chinensis
Actinidia20253 Actinidia chinensis
Ah.07g205310 Amaranthus hybridus
Ah.13g070480 Amaranthus hybridus
AL6G44860 Arabidopsis lyrata
AL7G29250 Arabidopsis lyrata
Aqoxy5G04301 Aquilegia oxysepala
Aqoxy7G00049 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YPY7B Arachis hypogaea
AT1G64584 Arabidopsis thaliana
AT4G10810 Arabidopsis thaliana
AT4G24026 Arabidopsis thaliana
Atru.chr5.701 Acer truncatum
Atru.chr9.1962 Acer truncatum
AUR62004513 Chenopodium quinoa
AUR62006063 Chenopodium quinoa
AUR62035564 Chenopodium quinoa
BcaB01g02737 Brassica carinata
BcaB05g23875 Brassica carinata
BcaB05g23876 Brassica carinata
BcaC01g04661 Brassica carinata
BcaC05g27913 Brassica carinata
BcaC09g50920 Brassica carinata
BcaNung01108 Brassica carinata
BcaNung05697 Brassica carinata
BcaNung06471 Brassica carinata
BolC1t01850H Brassica oleracea
BolC2t10252H Brassica oleracea
BolC3t15831H Brassica oleracea
BolC5t32654H Brassica oleracea
BolC7t45826H Brassica oleracea
BolC9t56428H Brassica oleracea
BraA01t01474Z Brassica rapa
BraA02t07650Z Brassica rapa
BraA03t12124Z Brassica rapa
BraA03t14558Z Brassica rapa
BraA08t32861Z Brassica rapa
BraA09t38405Z Brassica rapa
C01p19250 Brassica napus
C03p35200 Brassica napus
C05p39210 Brassica napus
C07p53320 Brassica napus
C09p35950 Brassica napus
CAN.G1415.17 Capsicum annuum
CAN.G481.40 Capsicum annuum
CAN.G874.33 Capsicum annuum
CANSAT21G0721 Cannabis sativa
CANSAT21G1677 Cannabis sativa
CARHR046350 Cardamine hirsuta
CARHR255790 Cardamine hirsuta
Carub.0006s2958 Capsella rubella
Carub.0007s1706 Capsella rubella
Ca_16727_v3 Cicer arietinum L.
Ca_23518_v3 Cicer arietinum L.
Cc02_g01250 Coffea canephora
CDE02G0840 Ceratophyllum demersum
Cfa003782 Carpinus fangiana
Cfa015968 Carpinus fangiana
Ciclev10022804m.g Citrus clementina
Ciclev10023176m.g Citrus clementina
Ciclev10033638m.g Citrus clementina
CiPaw.05G227500 Carya illinoinensis
CiPaw.11G115700 Carya illinoinensis
CiPaw.12G080100 Carya illinoinensis
ClCG01G000300 Citrullus lanatus
ClCG01G001890 Citrullus lanatus
COL.COLO4_06232 Corchorus olitorius
COL.COLO4_10758 Corchorus olitorius
COL.COLO4_16806 Corchorus olitorius
Cpa.g.sc1802.1 Carica papaya
Cpa.g.sc96.51 Carica papaya
CsaV3_5G000270 Cucumis sativus L.
CsaV3_5G002030 Cucumis sativus L.
CSS0003230 Camellia sinensis var. sinensis
CSS0006972 Camellia sinensis var. sinensis
CSS0010966 Camellia sinensis var. sinensis
CSS0024306 Camellia sinensis var. sinensis
DCAR_003769 Daucus carota
DCAR_008957 Daucus carota
DCAR_014550 Daucus carota
DCAR_022130 Daucus carota
Duzib084G0307 Durio zibethinus
ECA233G0233 Erigeron canadensis
EL10Ac1g00241 Beta vulgaris
EL10Ac3g05245 Beta vulgaris
FAN04G2505 Fragaria x ananassa
FAN08G3604 Fragaria x ananassa
FAN13G3255 Fragaria x ananassa
FAN18G2695 Fragaria x ananassa
FvH4_5g11470 Fragaria vesca
Glyma.05G219700 Glycine max
Glyma.07G054300 Glycine max
Glyma.08G026000 Glycine max
Gohir.A08G111400 Gossypium hirsutum
Gohir.A08G124800 Gossypium hirsutum
Gohir.A09G186001 Gossypium hirsutum
Gohir.A11G015250 Gossypium hirsutum
Gohir.A11G098500 Gossypium hirsutum
Gohir.A12G248300 Gossypium hirsutum
Gohir.D08G124400 Gossypium hirsutum
Gohir.D09G180500 Gossypium hirsutum
Gohir.D11G015350 Gossypium hirsutum
Gohir.D11G103100 Gossypium hirsutum
Gohir.D12G249000 Gossypium hirsutum
Gorai.004G131100 Gossypium raimondii
Gorai.004G151100 Gossypium raimondii
Gorai.006G202500 Gossypium raimondii
Gorai.007G015800 Gossypium raimondii
Gorai.007G110300 Gossypium raimondii
Gorai.008G267200 Gossypium raimondii
Gorai.012G097900 Gossypium raimondii
HanXRQChr04g0120471 Helianthus annuus
HanXRQChr08g0225161 Helianthus annuus
HanXRQChr16g0524361 Helianthus annuus
Haze_09122 Corylus avellana
Haze_15678 Corylus avellana
Hma1.2p1_0415F.1_g147960 Hydrangea macrophylla
Hma1.2p1_0591F.1_g185160 Hydrangea macrophylla
HPP92_013003 Vanilla planifolia
HPP92_014802 Vanilla planifolia
HPP92_025720 Vanilla planifolia
Lalb_Chr04g0254361 Lupinus albus
Lalb_Chr05g0223911 Lupinus albus
Lalb_Chr09g0332101 Lupinus albus
Lalb_Chr23g0271671 Lupinus albus
Lj1g0020347 Lotus japonicus
Lj3g0004362 Lotus japonicus
Lj4g0018385 Lotus japonicus
Lsat_1_v5_gn_4_30961 Lactuca sativa
Lsat_1_v5_gn_7_740 Lactuca sativa
Manes.01G039600 Manihot esculenta
Manes.01G053400 Manihot esculenta
Manes.02G005600 Manihot esculenta
Manes.05G021200 Manihot esculenta
MBI17_g21048_MAGBIO Magnolia biondii
MD01G1224000 Malus domestica
MD06G1113400 Malus domestica
MD07G1294800 Malus domestica
MD14G1134500 Malus domestica
Medtr3g491900 Medicago truncatula
Medtr8g027380 Medicago truncatula
Medtr8g099965 Medicago truncatula
MELO3C005750.2 Cucumis melo
MELO3C005905.2 Cucumis melo
Migut.B01892 Erythranthe guttata
Migut.F00191 Erythranthe guttata
Migut.N01532 Erythranthe guttata
Nitab4.5_0000015g0220 Nicotiana tabacum
Nitab4.5_0002780g0040 Nicotiana tabacum
Nitab4.5_0007100g0040 Nicotiana tabacum
Nn3g18930 Nelumbo nucifera
Oeu010701.1 Olea europaea
Oeu027320.1 Olea europaea
Os10g0502100 Oryza sativa ssp. japonica
Peaxi162Scf00618g00332 Petunia axillaris
Peaxi162Scf00740g00215 Petunia axillaris
PGR042G2701 Punica granatum
PGR142G1468 Punica granatum
PGSC0003DMG400007045 Solanum tuberosum
PGSC0003DMG400018543 Solanum tuberosum
PGSC0003DMG400019607 Solanum tuberosum
Phvul.002G328908 Phaseolus vulgaris
Phvul.009G047350 Phaseolus vulgaris
Phvul.010G115200 Phaseolus vulgaris
Potri.001G087200 Populus trichocarpa
Potri.002G173700 Populus trichocarpa
Potri.003G143800 Populus trichocarpa
Prupe.2G314400 Prunus persica
Prupe.5G126200 Prunus persica
Psat4g005000 Pisum sativum
Psat4g162600 Pisum sativum
Psat7g022720 Pisum sativum
QL02p028382 Quercus lobata
QL08p045815 Quercus lobata
QL09p037005 Quercus lobata
RcHm_v2.0_Chr1g0381731 Rosa chinensis
RcHm_v2.0_Chr7g0186341 Rosa chinensis
Rhsim07G0002900 Rhododendron simsii
Rhsim09G0207000 Rhododendron simsii
Sabra01G0063400 Salix brachista
Sabra02G0139700 Salix brachista
Sabra14G0073900 Salix brachista
SalBow2G2400 Salvia bowleyana
SalBow3G3175 Salvia bowleyana
SalBow4G0310 Salvia bowleyana
SalBow5G4530 Salvia bowleyana
Sc23g0002030 Simmondsia chinensis
Sed0015662 Sechium edule
Sed0023695 Sechium edule
Sed0027058 Sechium edule
SEGI_15730 Sequoiadendron giganteum
SHI13099 Sapria himalayana
Solyc06g052060.3 Solanum lycopersicum
Sopen03g022700 Solanum pennellii
Sopen05g028970 Solanum pennellii
Sopen06g018110 Solanum pennellii
Sp6g06680 Schrenkiella parvula
TAR375G0287 Trochodendron aralioides
TAR629G1883 Trochodendron aralioides
TAR636G1396 Trochodendron aralioides
THA.LOC104813050 Tarenaya hassleriana
THA.LOC109116607 Tarenaya hassleriana
Thecc.01G339800 Theobroma cacao
Thecc.03G202500 Theobroma cacao
Thecc.03G304300 Theobroma cacao
Thecc.03G304600 Theobroma cacao
Thhalv10015091m.g Eutrema salsugineum
Thhalv10026968m.g Eutrema salsugineum
Thhalv10029101m.g Eutrema salsugineum
TPR.G20234 Trifolium pratense
TPR.G33614 Trifolium pratense
TPR.G3409 Trifolium pratense
TWI60G1451 Tripterygium wilfordii
unitig_85.g27205 Utricularia gibba
Zm00001eb029410 Zea mays
Zm00001eb259280 Zea mays

User provided reference genes

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