Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13440 Brassica napus
A04p10590 Brassica napus
A04p15210 Brassica napus
A07p33090 Brassica napus
Aa31LG8G12150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3198 Anthoceros agrestis
Actinidia01599 Actinidia chinensis
Actinidia17178 Actinidia chinensis
Actinidia28791 Actinidia chinensis
Ah.03g147370 Amaranthus hybridus
AL2G23670 Arabidopsis lyrata
AL2G23680 Arabidopsis lyrata
AL7G46180 Arabidopsis lyrata
Aqoxy3G02868 Aquilegia oxysepala
Aqoxy5G04053 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TD12MZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W7Y30R Arachis hypogaea
AT1G66070 Arabidopsis thaliana
AT5G37475 Arabidopsis thaliana
ATR0743G023 Amborella trichopoda
Atru.chr1.1952 Acer truncatum
Atru.chr9.1638 Acer truncatum
AUR62003505 Chenopodium quinoa
AUR62007100 Chenopodium quinoa
AUR62019963 Chenopodium quinoa
BcaB01g01292 Brassica carinata
BcaB03g15296 Brassica carinata
BcaB03g15297 Brassica carinata
BcaB05g24148 Brassica carinata
BcaB05g24381 Brassica carinata
BcaB06g27069 Brassica carinata
BcaB06g27692 Brassica carinata
BcaC02g08888 Brassica carinata
BcaC02g09568 Brassica carinata
BcaC03g14729 Brassica carinata
BcaC08g46081 Brassica carinata
BcaC08g46082 Brassica carinata
BolC2t08308H Brassica oleracea
BolC4t25997H Brassica oleracea
BolC4t26528H Brassica oleracea
BolC6t39029H Brassica oleracea
BraA02t06402Z Brassica rapa
BraA04t16722Z Brassica rapa
BraA04t17161Z Brassica rapa
BraA07t30937Z Brassica rapa
C02p21740 Brassica napus
C04p44240 Brassica napus
C04p49430 Brassica napus
C06p39360 Brassica napus
CAN.G1181.25 Capsicum annuum
CANSAT01G2338 Cannabis sativa
CARHR058010 Cardamine hirsuta
CARHR215550 Cardamine hirsuta
Carub.0002s1202 Capsella rubella
Carub.0007s3263 Capsella rubella
Ca_11830_v3 Cicer arietinum L.
CBR_g41674 Chara braunii
Cc02_g12480 Coffea canephora
CDE07G0767 Ceratophyllum demersum
Ciclev10002394m.g Citrus clementina
CiPaw.05G244300 Carya illinoinensis
CiPaw.06G015400 Carya illinoinensis
ClCG01G008760 Citrullus lanatus
COL.COLO4_27584 Corchorus olitorius
COL.COLO4_34689 Corchorus olitorius
Cpa.g.sc178.2 Carica papaya
Cre06.g308850 Chlamydomonas reinhardtii
CsaV3_5G024250 Cucumis sativus L.
CSS0011396 Camellia sinensis var. sinensis
CSS0020472 Camellia sinensis var. sinensis
CSS0031475 Camellia sinensis var. sinensis
CSS0037921 Camellia sinensis var. sinensis
CSS0043531 Camellia sinensis var. sinensis
DCAR_009639 Daucus carota
DCAR_019930 Daucus carota
Dinv06240 Davidia involucrata
Dinv20511 Davidia involucrata
Dinv20531 Davidia involucrata
Duzib052G0144 Durio zibethinus
Duzib151G0431 Durio zibethinus
Duzib212G0528 Durio zibethinus
ECA238G3678 Erigeron canadensis
EL10Ac6g15380 Beta vulgaris
Eucgr.F02897 Eucalyptus grandis
FAN04G2030 Fragaria x ananassa
FAN08G1589 Fragaria x ananassa
FAN13G0663 Fragaria x ananassa
FAN13G1153 Fragaria x ananassa
FAN18G1653 Fragaria x ananassa
FAN18G4367 Fragaria x ananassa
FvH4_5g23100 Fragaria vesca
Glyma.09G165600 Glycine max
Glyma.16G215500 Glycine max
Gohir.A02G051600 Gossypium hirsutum
Gohir.A06G098502 Gossypium hirsutum
Gohir.A09G236200 Gossypium hirsutum
Gohir.A10G167800 Gossypium hirsutum
Gohir.D02G056500 Gossypium hirsutum
Gohir.D05G299050 Gossypium hirsutum
Gohir.D06G100650 Gossypium hirsutum
Gohir.D06G118466 Gossypium hirsutum
Gohir.D07G099500 Gossypium hirsutum
Gohir.D09G237000 Gossypium hirsutum
Gohir.D10G173900 Gossypium hirsutum
Gohir.D11G089501 Gossypium hirsutum
Gohir.D13G118950 Gossypium hirsutum
Gohir.D13G140900 Gossypium hirsutum
Gorai.005G062400 Gossypium raimondii
Gorai.006G260000 Gossypium raimondii
Gorai.007G095500 Gossypium raimondii
Gorai.009G316300 Gossypium raimondii
Gorai.010G115700 Gossypium raimondii
Gorai.011G194600 Gossypium raimondii
Gorai.013G133300 Gossypium raimondii
Gorai.013G157500 Gossypium raimondii
GSVIVG01000052001 Vitis vinifera
HanXRQChr04g0109401 Helianthus annuus
HanXRQChr14g0432091 Helianthus annuus
HanXRQChr17g0547371 Helianthus annuus
HanXRQChr17g0547381 Helianthus annuus
Haze_00671 Corylus avellana
Haze_14301 Corylus avellana
Hma1.2p1_0127F.1_g059670 Hydrangea macrophylla
Hma1.2p1_0331F.1_g127550 Hydrangea macrophylla
HPP92_018911 Vanilla planifolia
Hund04328 Selenicereus undatus
Lalb_Chr14g0370291 Lupinus albus
Lalb_Chr22g0353931 Lupinus albus
Lalb_Chr24g0398531 Lupinus albus
Lj2g0006781 Lotus japonicus
Lj3A832G16 Lonicera japonica
Lj6P692T22 Lonicera japonica
Lsat_1_v5_gn_2_38821 Lactuca sativa
Manes.06G016100 Manihot esculenta
Mapoly0038s0048 Marchantia polymorpha
MBI03_g35442_MAGBIO Magnolia biondii
MCO15G044 Micromonas commoda
MD06G1026500 Malus domestica
MD16G1279500 Malus domestica
Medtr6g478160 Medicago truncatula
MELO3C025123.2 Cucumis melo
Migut.H01515 Erythranthe guttata
Migut.M01208 Erythranthe guttata
MSTRG.13183 Avicennia marina
MSTRG.15930 Avicennia marina
MSTRG.7294 Avicennia marina
Nitab4.5_0000190g0170 Nicotiana tabacum
Nitab4.5_0003465g0050 Nicotiana tabacum
Nitab4.5_0003574g0100 Nicotiana tabacum
Nitab4.5_0009301g0020 Nicotiana tabacum
Nitab4.5_0012269g0010 Nicotiana tabacum
Nn2g12687 Nelumbo nucifera
Nn7g36916 Nelumbo nucifera
Oeu038230.1 Olea europaea
Oeu043695.1 Olea europaea
Oeu053940.1 Olea europaea
Oeu059553.1 Olea europaea
Os02g0122300 Oryza sativa ssp. japonica
Os05g0496100 Oryza sativa ssp. japonica
Peaxi162Scf00299g00531 Petunia axillaris
Peaxi162Scf00588g01011 Petunia axillaris
PGR042G1487 Punica granatum
PGSC0003DMG400022359 Solanum tuberosum
Phvul.004G141100 Phaseolus vulgaris
Potri.004G082200 Populus trichocarpa
Potri.017G138300 Populus trichocarpa
Pp3c12_15100 Physcomitrium patens
Pp3c13_8920 Physcomitrium patens
Pp3c24_9310 Physcomitrium patens
Pp3c3_11040 Physcomitrium patens
Pp3c4_20470 Physcomitrium patens
PRCOL_00000087 Prasinoderma coloniale
Prupe.5G027300 Prunus persica
Psat1g121400 Pisum sativum
PSO063G3459 Papaver somniferum
PSO135G0099 Papaver somniferum
PSO170G2980 Papaver somniferum
PSO384G2055 Papaver somniferum
QL01p029277 Quercus lobata
QL02p059987 Quercus lobata
QL07p034910 Quercus lobata
RcHm_v2.0_Chr7g0211981 Rosa chinensis
Rhsim10G0103000 Rhododendron simsii
Rhsim10G0103200 Rhododendron simsii
RhsimUnG0060500 Rhododendron simsii
RhsimUnG0060700 Rhododendron simsii
Sabra04G0054700 Salix brachista
Sabra17G0112200 Salix brachista
Sabra17G0112300 Salix brachista
Sabra17G0112500 Salix brachista
Sabra17G0112800 Salix brachista
Sabra17G0115000 Salix brachista
Sabra17G0115900 Salix brachista
Sabra17G0116300 Salix brachista
SalBow8G1240 Salvia bowleyana
Sc14g0006870 Simmondsia chinensis
Sed0014317 Sechium edule
Sed0024856 Sechium edule
SGA_v2.0_scaffold114G31974 Striga asiatica
SGA_v2.0_scaffold7G03956 Striga asiatica
SMO228G0136 Selaginella moellendorffii
Solyc02g079060.3 Solanum lycopersicum
Sopen02g023870 Solanum pennellii
Sp5g21120 Schrenkiella parvula
Sp7g04760 Schrenkiella parvula
TAR371G0008 Trochodendron aralioides
TAR374G0282 Trochodendron aralioides
TAR622G0065 Trochodendron aralioides
THA.LOC104822082 Tarenaya hassleriana
THA.LOC104823823 Tarenaya hassleriana
Thecc.04G291800 Theobroma cacao
Thhalv10019428m.g Eutrema salsugineum
Thhalv10027912m.g Eutrema salsugineum
TPR.G19886 Trifolium pratense
TWI15G0329 Tripterygium wilfordii
TWI60G0785 Tripterygium wilfordii
TWI74G0632 Tripterygium wilfordii
TWI81G0860 Tripterygium wilfordii
unitig_46.g18626 Utricularia gibba
vmacro12219 Vaccinium macrocarpon
VMungo0464G0847 Vigna mungo
Zm00001eb208430 Zea mays
Zm00001eb230510 Zea mays

User provided reference genes

Program Settings