Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21210 Brassica napus
A07p28050 Brassica napus
A07p42850 Brassica napus
Aa31LG4G7320 Aethionema arabicum
Aa31LG4G7330 Aethionema arabicum
Aa31LG4G7340 Aethionema arabicum
Aa31LG7G5590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3402__3403 Anthoceros agrestis
Actinidia15214 Actinidia chinensis
Actinidia21280 Actinidia chinensis
Ah.04g157860 Amaranthus hybridus
Ah.05g169130 Amaranthus hybridus
Ah.05g169140 Amaranthus hybridus
AL1G34750 Arabidopsis lyrata
AL2G37510 Arabidopsis lyrata
Aqoxy2G02388 Aquilegia oxysepala
Aqoxy5G02381 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PT3H3P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RUFP3A Arachis hypogaea
AT1G21610 Arabidopsis thaliana
AT1G77310 Arabidopsis thaliana
ATR0584G207 Amborella trichopoda
Atru.chr13.1565 Acer truncatum
Atru.chr4.996 Acer truncatum
Atru.chr4.997 Acer truncatum
AUR62013425 Chenopodium quinoa
BcaB02g07101 Brassica carinata
BcaB05g25039 Brassica carinata
BcaC03g15730 Brassica carinata
BcaC08g45481 Brassica carinata
BcaC08g47619 Brassica carinata
BolC2t09477H Brassica oleracea
BolC6t38271H Brassica oleracea
BolC6t40165H Brassica oleracea
BraA02t07140Z Brassica rapa
BraA07t30449Z Brassica rapa
BraA07t31806Z Brassica rapa
C02p34450 Brassica napus
C06p31320 Brassica napus
C06p51470 Brassica napus
CAN.G1347.5 Capsicum annuum
CAN.G716.6 Capsicum annuum
CANSAT11G0740 Cannabis sativa
CANSAT25G3561 Cannabis sativa
CARHR021970 Cardamine hirsuta
Carub.0001s2104 Capsella rubella
Carub.0002s2419 Capsella rubella
Ca_12646_v3 Cicer arietinum L.
Ca_16606_v3 Cicer arietinum L.
CBR_g45850 Chara braunii
Cc10_g12800 Coffea canephora
CDE02G1774 Ceratophyllum demersum
CDE08G0053 Ceratophyllum demersum
Cfa018128 Carpinus fangiana
Ciclev10000343m.g Citrus clementina
Ciclev10002136m.g Citrus clementina
CiPaw.15G031400 Carya illinoinensis
CiPaw.16G022800 Carya illinoinensis
ClCG08G006010 Citrullus lanatus
ClCG08G006020 Citrullus lanatus
COL.COLO4_08846 Corchorus olitorius
COL.COLO4_35810 Corchorus olitorius
Cpa.g.sc37.9 Carica papaya
Cpa.g.sc64.169 Carica papaya
Cpa.g.sc64.170 Carica papaya
CsaV3_6G034070 Cucumis sativus L.
CSS0008649 Camellia sinensis var. sinensis
CSS0012408 Camellia sinensis var. sinensis
CSS0019818 Camellia sinensis var. sinensis
CSS0035070 Camellia sinensis var. sinensis
CSS0038864 Camellia sinensis var. sinensis
DCAR_014371 Daucus carota
DCAR_016656 Daucus carota
Dinv14686 Davidia involucrata
Dinv14687 Davidia involucrata
Duzib041G0777 Durio zibethinus
Duzib093G0755 Durio zibethinus
Duzib187G0497 Durio zibethinus
Duzib264G0391 Durio zibethinus
Duzib264G0967 Durio zibethinus
ECA233G1095 Erigeron canadensis
ECA246G2541 Erigeron canadensis
EL10Ac1g01345 Beta vulgaris
FAN15G0848 Fragaria x ananassa
FAN20G3132 Fragaria x ananassa
FAN24G2697 Fragaria x ananassa
FAN27G2585 Fragaria x ananassa
FvH4_2g27830 Fragaria vesca
Glyma.04G245700 Glycine max
Glyma.06G117400 Glycine max
Glyma.13G032500 Glycine max
Glyma.14G154900 Glycine max
Gohir.A02G071200 Gossypium hirsutum
Gohir.A02G110500 Gossypium hirsutum
Gohir.A09G005500 Gossypium hirsutum
Gohir.A11G057600 Gossypium hirsutum
Gohir.D02G078300 Gossypium hirsutum
Gohir.D03G069004 Gossypium hirsutum
Gohir.D09G004800 Gossypium hirsutum
Gohir.D11G061800 Gossypium hirsutum
Gorai.005G087800 Gossypium raimondii
Gorai.006G006400 Gossypium raimondii
Gorai.007G066600 Gossypium raimondii
Gorai.013G107800 Gossypium raimondii
GSVIVG01008808001 Vitis vinifera
HanXRQChr05g0149791 Helianthus annuus
HanXRQChr12g0380661 Helianthus annuus
HanXRQChr15g0469001 Helianthus annuus
Hma1.2p1_0014F.1_g010220 Hydrangea macrophylla
Hma1.2p1_1887F.1_g306500 Hydrangea macrophylla
Hma1.2p1_1887F.1_g306510 Hydrangea macrophylla
Hma1.2p1_2178F.1_g316190 Hydrangea macrophylla
HPP92_025168 Vanilla planifolia
HPP92_025169 Vanilla planifolia
Hund07235 Selenicereus undatus
Lalb_Chr10g0101491 Lupinus albus
Lalb_Chr11g0066171 Lupinus albus
Lalb_Chr23g0271171 Lupinus albus
Lj1g0006258 Lotus japonicus
Lj1g0018738 Lotus japonicus
Lj4C682T14 Lonicera japonica
Lj7C583G0 Lonicera japonica
Lsat_1_v5_gn_1_7800 Lactuca sativa
Lsat_1_v5_gn_5_70161 Lactuca sativa
Lsat_1_v5_gn_6_110261 Lactuca sativa
Manes.02G168300 Manihot esculenta
Manes.18G082300 Manihot esculenta
Mapoly0042s0059 Marchantia polymorpha
MBI03_g34203_MAGBIO Magnolia biondii
MBI03_g39653_MAGBIO Magnolia biondii
MBI06_g35211_MAGBIO Magnolia biondii
MBI17_g17638_MAGBIO Magnolia biondii
MD08G1159200 Malus domestica
Medtr1g029680 Medicago truncatula
Medtr3g088585 Medicago truncatula
MELO3C010653.2 Cucumis melo
Migut.C01065 Erythranthe guttata
Migut.N03265 Erythranthe guttata
MSTRG.1414 Avicennia marina
MSTRG.25361 Avicennia marina
Nitab4.5_0001168g0100 Nicotiana tabacum
Nitab4.5_0003863g0040 Nicotiana tabacum
Nn1g08962 Nelumbo nucifera
Nn5g28434 Nelumbo nucifera
Oeu020901.1 Olea europaea
Oeu033990.1 Olea europaea
Oeu040401.1 Olea europaea
Oeu041727.1 Olea europaea
Os01g0883200 Oryza sativa ssp. japonica
Peaxi162Scf00066g00134 Petunia axillaris
PGR042G0595 Punica granatum
Phvul.001G070500 Phaseolus vulgaris
Phvul.009G129800 Phaseolus vulgaris
Potri.002G078800 Populus trichocarpa
Potri.005G067800 Populus trichocarpa
Potri.005G182300 Populus trichocarpa
Potri.007G101201 Populus trichocarpa
Pp3c13_4490 Physcomitrium patens
Pp3c3_8000 Physcomitrium patens
Prupe.1G489600 Prunus persica
Psat2g072080 Pisum sativum
Psat5g084800 Pisum sativum
Psat5g084840 Pisum sativum
Psat6g040480 Pisum sativum
Psat7g151960 Pisum sativum
PSO170G0953 Papaver somniferum
PSO528G0274 Papaver somniferum
RcHm_v2.0_Chr6g0293421 Rosa chinensis
RcHm_v2.0_Chr6g0296701 Rosa chinensis
Rhsim11G0071700 Rhododendron simsii
Sabra02G0061700 Salix brachista
Sabra05G0138200 Salix brachista
Sabra07G0083500 Salix brachista
Sabra07G0083600 Salix brachista
SalBow2G2699 Salvia bowleyana
SalBow7G0800 Salvia bowleyana
SalBow7G2753 Salvia bowleyana
Sc02g0004730 Simmondsia chinensis
Sc15g0007510 Simmondsia chinensis
Sed0001846 Sechium edule
Sed0016256 Sechium edule
SEGI_00917 Sequoiadendron giganteum
SEGI_13465 Sequoiadendron giganteum
SEGI_22624 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10423 Striga asiatica
SGA_v2.0_scaffold25G11135 Striga asiatica
SGA_v2.0_scaffold28G11976 Striga asiatica
SGA_v2.0_scaffold52G18922 Striga asiatica
SGA_v2.0_scaffold81G26136 Striga asiatica
SGA_v2.0_scaffold81G26137 Striga asiatica
SHI09202 Sapria himalayana
SMO116G0073 Selaginella moellendorffii
SMO367G0049 Selaginella moellendorffii
SMO367G1174 Selaginella moellendorffii
Solyc11g005130.2 Solanum lycopersicum
Sopen11g001130 Solanum pennellii
Sopen11g018240 Solanum pennellii
Sp1g19140 Schrenkiella parvula
Sp5g32490 Schrenkiella parvula
TAR229G0004 Trochodendron aralioides
TAR625G0294 Trochodendron aralioides
TAR628G1099 Trochodendron aralioides
THA.LOC104812084 Tarenaya hassleriana
THA.LOC104813681 Tarenaya hassleriana
Thecc.01G136900 Theobroma cacao
Thecc.08G132900 Theobroma cacao
Thhalv10018217m.g Eutrema salsugineum
TPR.G28812 Trifolium pratense
TPR.G30547 Trifolium pratense
TPR.G39636 Trifolium pratense
TWI32G1117 Tripterygium wilfordii
TWI34G0175 Tripterygium wilfordii
unitig_0.g901 Utricularia gibba
unitig_0.g902 Utricularia gibba
unitig_61.g26062 Utricularia gibba
vmacro00865 Vaccinium macrocarpon
VMungo0647G0503 Vigna mungo
VMungo0647G0799 Vigna mungo
VMungo1215G2387 Vigna mungo
VMungo1309G2236 Vigna mungo
Zm00001eb145640 Zea mays
Zm00001eb366110 Zea mays
Zm00001eb366130 Zea mays

User provided reference genes

Program Settings