Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08900 Brassica napus
A08p07090 Brassica napus
A10p03320 Brassica napus
Aa31LG1G19890 Aethionema arabicum
Aa31LG9G4010 Aethionema arabicum
Aa31LG9G4770 Aethionema arabicum
Actinidia11415 Actinidia chinensis
Actinidia39966 Actinidia chinensis
AL1G14610 Arabidopsis lyrata
AL7G42940 Arabidopsis lyrata
AL9U10880 Arabidopsis lyrata
Aqoxy2G03870 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D2J5MW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FF2036 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1B7D1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QZ7VGM Arachis hypogaea
AT1G04890 Arabidopsis thaliana
AT4G13160 Arabidopsis thaliana
AT4G13630 Arabidopsis thaliana
ATR1145G039 Amborella trichopoda
Atru.chr4.1704 Acer truncatum
Atru.chr5.2076 Acer truncatum
AUR62018595 Chenopodium quinoa
AUR62020823 Chenopodium quinoa
AUR62027091 Chenopodium quinoa
AUR62030931 Chenopodium quinoa
BcaB01g01522 Brassica carinata
BcaB02g06894 Brassica carinata
BcaB03g16063 Brassica carinata
BcaB03g16115 Brassica carinata
BcaC02g09401 Brassica carinata
BcaC02g09442 Brassica carinata
BcaC05g24432 Brassica carinata
BolC4t25806H Brassica oleracea
BolC4t25843H Brassica oleracea
BolC5t29086H Brassica oleracea
BraA04t16545Z Brassica rapa
BraA04t16586Z Brassica rapa
BraA08t32722Z Brassica rapa
BraA10t42608Z Brassica rapa
C04p42780 Brassica napus
C05p03040 Brassica napus
CAN.G767.39 Capsicum annuum
CARHR004280 Cardamine hirsuta
CARHR218630 Cardamine hirsuta
CARHR219340 Cardamine hirsuta
Carub.0001s0413 Capsella rubella
Carub.0007s2890 Capsella rubella
Carub.0007s2954 Capsella rubella
Ca_00174_v3 Cicer arietinum L.
Ca_07173_v3 Cicer arietinum L.
Cc03_g07810 Coffea canephora
CDE05G1872 Ceratophyllum demersum
CDE05G1978 Ceratophyllum demersum
Cfa002575 Carpinus fangiana
Cfa014915 Carpinus fangiana
Ciclev10004416m.g Citrus clementina
Ciclev10019391m.g Citrus clementina
CiPaw.01G121100 Carya illinoinensis
CiPaw.03G148900 Carya illinoinensis
ClCG05G003300 Citrullus lanatus
ClCG09G009000 Citrullus lanatus
COL.COLO4_13124 Corchorus olitorius
COL.COLO4_15685 Corchorus olitorius
Cpa.g.sc1068.2 Carica papaya
Cpa.g.sc1068.3 Carica papaya
Cpa.g.sc8.149 Carica papaya
CsaV3_3G010930 Cucumis sativus L.
CsaV3_4G014720 Cucumis sativus L.
CsaV3_7G025980 Cucumis sativus L.
CSS0027357 Camellia sinensis var. sinensis
CSS0040323 Camellia sinensis var. sinensis
DCAR_001846 Daucus carota
DCAR_019030 Daucus carota
DCAR_026612 Daucus carota
Dinv38235 Davidia involucrata
Duzib133G0416 Durio zibethinus
Duzib138G1925 Durio zibethinus
Duzib211G0454 Durio zibethinus
Duzib211G0671 Durio zibethinus
Duzib212G0641 Durio zibethinus
ECA238G0219 Erigeron canadensis
EL10Ac3g06505 Beta vulgaris
EL10Ac3g07486 Beta vulgaris
Eucgr.H00053 Eucalyptus grandis
Eucgr.K02163 Eucalyptus grandis
FAN07G2438 Fragaria x ananassa
FAN15G3664 Fragaria x ananassa
FvH4_2g11370 Fragaria vesca
FvH4_2g19000 Fragaria vesca
FvH4_4g15740 Fragaria vesca
Glyma.03G081600 Glycine max
Glyma.07G183700 Glycine max
Glyma.13G255600 Glycine max
Glyma.15G059100 Glycine max
Glyma.16G093400 Glycine max
Gohir.A02G023200 Gossypium hirsutum
Gohir.A03G094400 Gossypium hirsutum
Gohir.A07G156700 Gossypium hirsutum
Gohir.A07G200900 Gossypium hirsutum
Gohir.A09G205200 Gossypium hirsutum
Gohir.D02G030500 Gossypium hirsutum
Gohir.D02G123700 Gossypium hirsutum
Gohir.D07G163000 Gossypium hirsutum
Gohir.D07G207200 Gossypium hirsutum
Gohir.D09G198866 Gossypium hirsutum
Gohir.D09G198932 Gossypium hirsutum
Gorai.001G186900 Gossypium raimondii
Gorai.001G233600 Gossypium raimondii
Gorai.005G033800 Gossypium raimondii
Gorai.005G130500 Gossypium raimondii
Gorai.006G222500 Gossypium raimondii
GSVIVG01021064001 Vitis vinifera
HanXRQChr14g0435971 Helianthus annuus
HanXRQChr15g0484311 Helianthus annuus
Haze_11609 Corylus avellana
Haze_24807 Corylus avellana
Hma1.2p1_0010F.1_g006740 Hydrangea macrophylla
Hma1.2p1_0187F.1_g082140 Hydrangea macrophylla
Hma1.2p1_1407F.1_g281460 Hydrangea macrophylla
Hma1.2p1_1522F.1_g288760 Hydrangea macrophylla
HPP92_009909 Vanilla planifolia
HPP92_024668 Vanilla planifolia
HPP92_024669 Vanilla planifolia
HPP92_024671 Vanilla planifolia
Hund18993 Selenicereus undatus
Lalb_Chr07g0194091 Lupinus albus
Lalb_Chr12g0209731 Lupinus albus
Lalb_Chr15g0090301 Lupinus albus
Lalb_Chr16g0383031 Lupinus albus
Lalb_Chr17g0344381 Lupinus albus
Lalb_Chr20g0122791 Lupinus albus
Lj3A413T40 Lonicera japonica
Lj3g0010463 Lotus japonicus
Lj6C557T2 Lonicera japonica
Lsat_1_v5_gn_2_44920 Lactuca sativa
Manes.03G147800 Manihot esculenta
Manes.03G147900 Manihot esculenta
Manes.12G042050 Manihot esculenta
Manes.12G045100 Manihot esculenta
Manes.13G047500 Manihot esculenta
Manes.15G053600 Manihot esculenta
Manes.15G053700 Manihot esculenta
MD04G1008700 Malus domestica
MD05G1174700 Malus domestica
MD10G1163900 Malus domestica
MD13G1285200 Malus domestica
Medtr2g009770 Medicago truncatula
Medtr2g009780 Medicago truncatula
Medtr4g011540 Medicago truncatula
Medtr4g011550 Medicago truncatula
MELO3C018050.2 Cucumis melo
MELO3C021024.2 Cucumis melo
Migut.G00682 Erythranthe guttata
MSTRG.4218 Avicennia marina
Nitab4.5_0000676g0140 Nicotiana tabacum
Nitab4.5_0000850g0060 Nicotiana tabacum
Nn1g07867 Nelumbo nucifera
Nn3g19973 Nelumbo nucifera
Nn5g29818 Nelumbo nucifera
Oeu022111.1 Olea europaea
Oeu045308.1 Olea europaea
Oeu055787.1 Olea europaea
Peaxi162Scf00299g00036 Petunia axillaris
Peaxi162Scf00652g00217 Petunia axillaris
PGR044G0349 Punica granatum
PGSC0003DMG401004568 Solanum tuberosum
Phvul.010G018600 Phaseolus vulgaris
Potri.002G242900 Populus trichocarpa
Potri.017G055100 Populus trichocarpa
Prupe.1G008000 Prunus persica
Prupe.8G202200 Prunus persica
Psat1g214240 Pisum sativum
Psat7g254360 Pisum sativum
QL06p024679 Quercus lobata
QL09p054132 Quercus lobata
RcHm_v2.0_Chr4g0415341 Rosa chinensis
RcHm_v2.0_Chr6g0270031 Rosa chinensis
RcHm_v2.0_Chr6g0284791 Rosa chinensis
Rhsim02G0057100 Rhododendron simsii
Sabra02G0185000 Salix brachista
Sabra09G0060700 Salix brachista
Sabra17G0046700 Salix brachista
Sabra17G0048900 Salix brachista
SalBow8G0497 Salvia bowleyana
Sc13g0000180 Simmondsia chinensis
Sed0006189 Sechium edule
Sed0016344 Sechium edule
Sed0017391 Sechium edule
Sed0024186 Sechium edule
Sed0025050 Sechium edule
SEGI_05226 Sequoiadendron giganteum
SEGI_22838 Sequoiadendron giganteum
SEGI_33503 Sequoiadendron giganteum
SGA_v2.0_scaffold300G47761 Striga asiatica
Solyc12g098380.3 Solanum lycopersicum
Sopen12g033160 Solanum pennellii
Sp1g03730 Schrenkiella parvula
Sp7g10550 Schrenkiella parvula
Sp7g11340 Schrenkiella parvula
TAR362G0760 Trochodendron aralioides
TAR628G1321 Trochodendron aralioides
TAR633G0799 Trochodendron aralioides
THA.LOC104801032 Tarenaya hassleriana
THA.LOC104804609 Tarenaya hassleriana
THA.LOC104808713 Tarenaya hassleriana
THA.LOC104821650 Tarenaya hassleriana
Thecc.01G224900 Theobroma cacao
Thecc.04G204200 Theobroma cacao
Thhalv10009864m.g Eutrema salsugineum
Thhalv10024808m.g Eutrema salsugineum
Thhalv10026862m.g Eutrema salsugineum
TPR.G16910 Trifolium pratense
TPR.G38596 Trifolium pratense
TPR.G9486 Trifolium pratense
TWI14G1081 Tripterygium wilfordii
TWI18G1051 Tripterygium wilfordii
TWI75G0955 Tripterygium wilfordii
unitig_92.g28198 Utricularia gibba
vmacro15528 Vaccinium macrocarpon
vmacro15529 Vaccinium macrocarpon
VMungo0331G0775 Vigna mungo
VMungo0540G1645 Vigna mungo

User provided reference genes

Program Settings