Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p62630 Brassica napus
A08p17050 Brassica napus
Aa31LG2G16610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3492 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.839 Anthoceros agrestis
Actinidia00421 Actinidia chinensis
Actinidia17881 Actinidia chinensis
Actinidia27965 Actinidia chinensis
AL7G17220 Arabidopsis lyrata
Aqoxy6G02907 Aquilegia oxysepala
Aqoxy6G02908 Aquilegia oxysepala
AT4G34150 Arabidopsis thaliana
ATR0006G017 Amborella trichopoda
Atru.chr13.747 Acer truncatum
Atru.chr5.2596 Acer truncatum
Atru.chr9.457 Acer truncatum
AUR62010270 Chenopodium quinoa
AUR62013250 Chenopodium quinoa
BcaB03g11849 Brassica carinata
BcaC01g00923 Brassica carinata
BcaC09g49529 Brassica carinata
BcaNung03362 Brassica carinata
BcaNung03798 Brassica carinata
BolC1t03514H Brassica oleracea
BolC3t20889H Brassica oleracea
BolC7t46459H Brassica oleracea
BraA03t15332Z Brassica rapa
BraA08t33667Z Brassica rapa
C01p35530 Brassica napus
C01p35540 Brassica napus
C03p85980 Brassica napus
C07p60180 Brassica napus
CAN.G1231.18 Capsicum annuum
CANSAT25G2199 Cannabis sativa
CARHR242700 Cardamine hirsuta
Carub.0007s0625 Capsella rubella
Ca_24339_v3 Cicer arietinum L.
CBR_g36297 Chara braunii
CBR_g36985 Chara braunii
Cc02_g19120 Coffea canephora
CDE04G1635 Ceratophyllum demersum
CDE04G2560 Ceratophyllum demersum
Cfa004558 Carpinus fangiana
Cfa004559 Carpinus fangiana
Cfa021169 Carpinus fangiana
Ciclev10002299m.g Citrus clementina
Ciclev10029976m.g Citrus clementina
CiPaw.05G009500 Carya illinoinensis
CiPaw.05G009600 Carya illinoinensis
ClCG02G006210 Citrullus lanatus
ClCG05G020200 Citrullus lanatus
COL.COLO4_10118 Corchorus olitorius
COL.COLO4_10119 Corchorus olitorius
COL.COLO4_32616 Corchorus olitorius
Cpa.g.sc200.14 Carica papaya
Cpa.g.sc21.156 Carica papaya
Cre01.g015500 Chlamydomonas reinhardtii
Cre02.g110350 Chlamydomonas reinhardtii
Cre06.g305750 Chlamydomonas reinhardtii
Cre11.g467593 Chlamydomonas reinhardtii
Cre11.g467594 Chlamydomonas reinhardtii
Cre11.g467595 Chlamydomonas reinhardtii
Cre11.g467599 Chlamydomonas reinhardtii
Cre11.g467601 Chlamydomonas reinhardtii
Cre12.g485200 Chlamydomonas reinhardtii
Cre17.g723700 Chlamydomonas reinhardtii
CsaV3_4G034680 Cucumis sativus L.
CsaV3_7G008320 Cucumis sativus L.
CSS0003976 Camellia sinensis var. sinensis
CSS0037575 Camellia sinensis var. sinensis
DCAR_001634 Daucus carota
DCAR_003613 Daucus carota
DCAR_022000 Daucus carota
Dinv15749 Davidia involucrata
Dinv42181 Davidia involucrata
Duzib041G0003 Durio zibethinus
Duzib052G0711 Durio zibethinus
Duzib132G0166 Durio zibethinus
Duzib248G1024 Durio zibethinus
ECA234G1195 Erigeron canadensis
ECA236G3143 Erigeron canadensis
ECA240G3211 Erigeron canadensis
EL10Ac9g22308 Beta vulgaris
Eucgr.F02307 Eucalyptus grandis
Eucgr.I01113 Eucalyptus grandis
FAN15G1650 Fragaria x ananassa
FAN20G2052 Fragaria x ananassa
FAN24G1840 Fragaria x ananassa
FAN27G0649 Fragaria x ananassa
FvH4_2g05480 Fragaria vesca
Glyma.01G244500 Glycine max
Glyma.11G000700 Glycine max
Gohir.A01G007600 Gossypium hirsutum
Gohir.A03G187000 Gossypium hirsutum
Gohir.A05G205500 Gossypium hirsutum
Gohir.A06G021250 Gossypium hirsutum
Gohir.A13G042900 Gossypium hirsutum
Gohir.D01G007700 Gossypium hirsutum
Gohir.D02G207800 Gossypium hirsutum
Gohir.D05G208800 Gossypium hirsutum
Gohir.D06G019063 Gossypium hirsutum
Gorai.002G008800 Gossypium raimondii
Gorai.005G235700 Gossypium raimondii
Gorai.009G215200 Gossypium raimondii
Gorai.010G022800 Gossypium raimondii
Gorai.013G046300 Gossypium raimondii
GSVIVG01003176001 Vitis vinifera
GSVIVG01009437001 Vitis vinifera
HanXRQChr03g0070191 Helianthus annuus
HanXRQChr03g0070201 Helianthus annuus
HanXRQChr03g0070211 Helianthus annuus
HanXRQChr03g0070221 Helianthus annuus
HanXRQChr10g0302061 Helianthus annuus
HanXRQChr16g0510001 Helianthus annuus
Haze_10149 Corylus avellana
Haze_10150 Corylus avellana
Haze_10151 Corylus avellana
Haze_10152 Corylus avellana
Haze_10153 Corylus avellana
Hma1.2p1_0634F.1_g193010 Hydrangea macrophylla
Hma1.2p1_0796F.1_g219040 Hydrangea macrophylla
HPP92_015276 Vanilla planifolia
Hund00140 Selenicereus undatus
Hund06325 Selenicereus undatus
Lalb_Chr16g0376241 Lupinus albus
Lj1g0025517 Lotus japonicus
Lsat_1_v5_gn_0_4121 Lactuca sativa
Lsat_1_v5_gn_5_114540 Lactuca sativa
Lsat_1_v5_gn_9_111400 Lactuca sativa
Manes.10G077400 Manihot esculenta
Mapoly0188s0003 Marchantia polymorpha
MBI16_g12378_MAGBIO Magnolia biondii
MD00G1045300 Malus domestica
MD05G1087200 Malus domestica
Medtr5g004800 Medicago truncatula
Medtr5g004870 Medicago truncatula
MELO3C016783.2 Cucumis melo
MELO3C018475.2 Cucumis melo
Migut.B00376 Erythranthe guttata
MSTRG.20176 Avicennia marina
Nitab4.5_0002543g0110 Nicotiana tabacum
Nitab4.5_0003771g0040 Nicotiana tabacum
Nn1g04735 Nelumbo nucifera
Nn1g08102 Nelumbo nucifera
Nn1g08103 Nelumbo nucifera
Nn3g20124 Nelumbo nucifera
Nn3g20125 Nelumbo nucifera
Nn5g30392 Nelumbo nucifera
Oeu001762.2 Olea europaea
Oeu013734.1 Olea europaea
Oeu017475.1 Olea europaea
Oeu044291.1 Olea europaea
Os06g0638900 Oryza sativa ssp. japonica
Peaxi162Scf00003g02441 Petunia axillaris
Peaxi162Scf00016g02249 Petunia axillaris
PGR031G1423 Punica granatum
PGR142G1514 Punica granatum
PGSC0003DMG400006217 Solanum tuberosum
PGSC0003DMG400030217 Solanum tuberosum
PGSC0003DMG402025869 Solanum tuberosum
Phvul.002G053900 Phaseolus vulgaris
Potri.001G301900 Populus trichocarpa
Potri.002G123200 Populus trichocarpa
Potri.009G097900 Populus trichocarpa
Pp3c12_12080 Physcomitrium patens
Pp3c1_41500 Physcomitrium patens
Pp3c3_32270 Physcomitrium patens
Pp3c9_12510 Physcomitrium patens
Pp3c9_16970 Physcomitrium patens
Prupe.8G131800 Prunus persica
Psat4g228360 Pisum sativum
PSO170G0220 Papaver somniferum
PSO210G2766 Papaver somniferum
PSO541G2166 Papaver somniferum
PSO675G7902 Papaver somniferum
QL02p072870 Quercus lobata
QL06p044808 Quercus lobata
QL11p027891 Quercus lobata
QL11p034267 Quercus lobata
RcHm_v2.0_Chr6g0255751 Rosa chinensis
Rhsim05G0087300 Rhododendron simsii
Rhsim11G0161100 Rhododendron simsii
RhsimUnG0060900 Rhododendron simsii
Sabra02G0096600 Salix brachista
Sabra09G0075000 Salix brachista
Sabra16G0189800 Salix brachista
Sabra16G0189900 Salix brachista
Sabra16G0190000 Salix brachista
SalBow6G2089 Salvia bowleyana
Sc08g0001550 Simmondsia chinensis
Sed0005673 Sechium edule
Sed0025200 Sechium edule
SEGI_17734 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43090 Striga asiatica
SGA_v2.0_scaffold32G13045 Striga asiatica
SMO134G0132 Selaginella moellendorffii
SMO174G0179 Selaginella moellendorffii
SMO343G0144 Selaginella moellendorffii
SMO364G0288 Selaginella moellendorffii
SMO367G0234 Selaginella moellendorffii
Solyc01g107740.3 Solanum lycopersicum
Solyc10g050060.2 Solanum lycopersicum
Sopen01g049920 Solanum pennellii
Sopen10g021200 Solanum pennellii
Sp7g31900 Schrenkiella parvula
TAR381G0401 Trochodendron aralioides
TAR625G0422 Trochodendron aralioides
TAR628G0589 Trochodendron aralioides
TAR628G1177 Trochodendron aralioides
TAR628G1276 Trochodendron aralioides
THA.LOC104804383 Tarenaya hassleriana
THA.LOC104807253 Tarenaya hassleriana
Thecc.02G105800 Theobroma cacao
Thecc.08G001400 Theobroma cacao
Thhalv10026060m.g Eutrema salsugineum
TWI31G0241 Tripterygium wilfordii
TWI75G0163 Tripterygium wilfordii
TWI79G1016 Tripterygium wilfordii
unitig_21.g20737 Utricularia gibba
vmacro02012 Vaccinium macrocarpon
vmacro19518 Vaccinium macrocarpon
VMungo1215G2306 Vigna mungo
Zm00001eb387300 Zea mays

User provided reference genes

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