Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18140 Brassica napus
A05p13140 Brassica napus
A08p36480 Brassica napus
A10p03780 Brassica napus
A10p03830 Brassica napus
Aa31LG1G19430 Aethionema arabicum
Aa31LG8G5790 Aethionema arabicum
Aa31LG8G5800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4124 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4125 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4126 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.999 Anthoceros agrestis
Actinidia30511 Actinidia chinensis
Ah.01g014610 Amaranthus hybridus
Ah.01g014620 Amaranthus hybridus
AL125U10034 Arabidopsis lyrata
AL1G15050 Arabidopsis lyrata
AL4G27732 Arabidopsis lyrata
Aqoxy4G02067 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9WLS7Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AR4R13 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KAFC7Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3QZTF Arachis hypogaea
AT1G05270 Arabidopsis thaliana
AT2G32340 Arabidopsis thaliana
ATR0794G140 Amborella trichopoda
Atru.chr6.3154 Acer truncatum
AUR62025067 Chenopodium quinoa
AUR62037143 Chenopodium quinoa
AUR62037144 Chenopodium quinoa
BcaB01g01765 Brassica carinata
BcaB01g03983 Brassica carinata
BcaB01g03984 Brassica carinata
BcaB02g10475 Brassica carinata
BcaB05g22122 Brassica carinata
BcaB05g23732 Brassica carinata
BcaB05g24467 Brassica carinata
BcaC01g05909 Brassica carinata
BcaC02g11329 Brassica carinata
BcaC05g24396 Brassica carinata
BcaC05g24399 Brassica carinata
BcaC07g36852 Brassica carinata
BcaC07g42139 Brassica carinata
BolC3t14500H Brassica oleracea
BolC3t15982H Brassica oleracea
BolC4t23281H Brassica oleracea
BolC4t25451H Brassica oleracea
BolC5t29129H Brassica oleracea
BolC8t46984H Brassica oleracea
BolC8t52711H Brassica oleracea
BolC8t52712H Brassica oleracea
BraA03t11073Z Brassica rapa
BraA05t20252Z Brassica rapa
BraA05t20780Z Brassica rapa
BraA08t35551Z Brassica rapa
BraA09t42082Z Brassica rapa
BraA10t42653Z Brassica rapa
BraA10t42657Z Brassica rapa
C03p21170 Brassica napus
C03p36680 Brassica napus
C04p17290 Brassica napus
C05p03480 Brassica napus
C05p03520 Brassica napus
C05p51560 Brassica napus
C08p01860 Brassica napus
C09p44370 Brassica napus
CAN.G80.21 Capsicum annuum
CAN.G921.9 Capsicum annuum
CANSAT64G1715 Cannabis sativa
CARHR004740 Cardamine hirsuta
CARHR126150 Cardamine hirsuta
CARHR126160 Cardamine hirsuta
Carub.0001s0456 Capsella rubella
Carub.0004s1369 Capsella rubella
Ca_19100_v3 Cicer arietinum L.
Ca_19102_v3 Cicer arietinum L.
Ca_27660_v3 Cicer arietinum L.
Ca_28271_v3 Cicer arietinum L.
CBR_g51235 Chara braunii
CBR_g9048 Chara braunii
Cc05_g05030 Coffea canephora
CDE05G1053 Ceratophyllum demersum
Cfa014437 Carpinus fangiana
Ciclev10015457m.g Citrus clementina
CiPaw.03G162600 Carya illinoinensis
CiPaw.04G117500 Carya illinoinensis
ClCG02G008460 Citrullus lanatus
COL.COLO4_12981 Corchorus olitorius
Cpa.g.sc8.233 Carica papaya
CsaV3_2G035170 Cucumis sativus L.
CSS0049428 Camellia sinensis var. sinensis
DCAR_012955 Daucus carota
Dinv02749 Davidia involucrata
Dinv18529 Davidia involucrata
Duzib248G1274 Durio zibethinus
ECA233G0914 Erigeron canadensis
EL10Ac9g20661 Beta vulgaris
Eucgr.K00810 Eucalyptus grandis
FAN02G0663 Fragaria x ananassa
FAN05G4232 Fragaria x ananassa
FAN09G0800 Fragaria x ananassa
FAN09G1506 Fragaria x ananassa
FAN14G1636 Fragaria x ananassa
FvH4_6g43520 Fragaria vesca
Glyma.12G101300 Glycine max
Glyma.U031313 Glycine max
Gohir.A13G059500 Gossypium hirsutum
Gohir.D13G062500 Gossypium hirsutum
Gorai.013G071000 Gossypium raimondii
GSVIVG01030621001 Vitis vinifera
HanXRQChr17g0560931 Helianthus annuus
Haze_12895 Corylus avellana
Hma1.2p1_0613F.1_g189150 Hydrangea macrophylla
HPP92_017620 Vanilla planifolia
Lalb_Chr01g0005571 Lupinus albus
Lalb_Chr03g0028881 Lupinus albus
Lj3g0000029 Lotus japonicus
Lj3g0014705 Lotus japonicus
Lj3g0025078 Lotus japonicus
Lj3g0026585 Lotus japonicus
Lj8A123T53 Lonicera japonica
Lsat_1_v5_gn_8_129420 Lactuca sativa
Manes.13G072700 Manihot esculenta
Mapoly0032s0039 Marchantia polymorpha
Mapoly0065s0011 Marchantia polymorpha
MBI02_g34314_MAGBIO Magnolia biondii
MCO03G413 Micromonas commoda
MCO04G316 Micromonas commoda
MCO15G661 Micromonas commoda
MD09G1105400 Malus domestica
MD17G1092800 Malus domestica
MD17G1093000 Malus domestica
Medtr4g046663 Medicago truncatula
Medtr4g046707 Medicago truncatula
Medtr6g055230 Medicago truncatula
MELO3C019237.2 Cucumis melo
Migut.H01221 Erythranthe guttata
MSTRG.12287 Avicennia marina
MSTRG.14153 Avicennia marina
Nitab4.5_0000631g0050 Nicotiana tabacum
Nitab4.5_0001176g0140 Nicotiana tabacum
Nitab4.5_0005894g0020 Nicotiana tabacum
Nitab4.5_0006207g0040 Nicotiana tabacum
Nn1g03660 Nelumbo nucifera
Nn1g07002 Nelumbo nucifera
Oeu003067.1 Olea europaea
Os05g0499500 Oryza sativa ssp. japonica
Peaxi162Scf00007g01221 Petunia axillaris
Peaxi162Scf00012g00336 Petunia axillaris
PGR142G1323 Punica granatum
PGR142G3240 Punica granatum
PGSC0003DMG400024333 Solanum tuberosum
PGSC0003DMG400026175 Solanum tuberosum
Phvul.011G106000 Phaseolus vulgaris
Potri.007G121800 Populus trichocarpa
Potri.007G121900 Populus trichocarpa
Potri.017G038500 Populus trichocarpa
Pp3c12_24810 Physcomitrium patens
Pp3c16_8270 Physcomitrium patens
Pp3c25_430 Physcomitrium patens
Pp3c3_37060 Physcomitrium patens
Prupe.3G220000 Prunus persica
Psat7g195560 Pisum sativum
PSO541G1708 Papaver somniferum
PSO675G8127 Papaver somniferum
QL08p033752 Quercus lobata
RcHm_v2.0_Chr2g0160041 Rosa chinensis
Sabra07G0098500 Salix brachista
Sabra07G0098600 Salix brachista
Sabra17G0025600 Salix brachista
SalBow1G0142 Salvia bowleyana
SalBow1G0983 Salvia bowleyana
SalBow1G4454 Salvia bowleyana
SalBow1G5165 Salvia bowleyana
SalBow1G5448 Salvia bowleyana
SalBow1G5722 Salvia bowleyana
SalBow1G5817 Salvia bowleyana
SalBow1G6109 Salvia bowleyana
SalBow1G7597 Salvia bowleyana
SalBow1G7952 Salvia bowleyana
SalBow1G8297 Salvia bowleyana
SalBow3G2088 Salvia bowleyana
SalBow3G4408 Salvia bowleyana
SalBow6G4003 Salvia bowleyana
Sc12g0002370 Simmondsia chinensis
Sed0000552 Sechium edule
Sed0009847 Sechium edule
SEGI_12133 Sequoiadendron giganteum
SEGI_18135 Sequoiadendron giganteum
SEGI_25045 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18335 Striga asiatica
SHI17596 Sapria himalayana
SMO198G0027 Selaginella moellendorffii
SMO238G0005 Selaginella moellendorffii
SMO329G0091 Selaginella moellendorffii
SMO329G0098 Selaginella moellendorffii
Solyc07g052560.3 Solanum lycopersicum
Solyc12g005780.3 Solanum lycopersicum
Sopen07g026170 Solanum pennellii
Sopen12g001710 Solanum pennellii
Sp1g04125 Schrenkiella parvula
Sp4g14710 Schrenkiella parvula
SpUn0024_0010 Schrenkiella parvula
TAR626G0646 Trochodendron aralioides
THA.LOC104800983 Tarenaya hassleriana
THA.LOC104827382 Tarenaya hassleriana
Thecc.02G162000 Theobroma cacao
Thhalv10002878m.g Eutrema salsugineum
Thhalv10007929m.g Eutrema salsugineum
Thhalv10017846m.g Eutrema salsugineum
Thhalv10017883m.g Eutrema salsugineum
TPR.G13526 Trifolium pratense
TPR.G19036 Trifolium pratense
TPR.G19041 Trifolium pratense
TPR.G39901 Trifolium pratense
TWI36G0602 Tripterygium wilfordii
TWI36G1576 Tripterygium wilfordii
TWI75G1157 Tripterygium wilfordii
unitig_21.g20057 Utricularia gibba
vmacro09325 Vaccinium macrocarpon
VMungo1127G1692 Vigna mungo
VMungo1127G1760 Vigna mungo
VMungo1127G1794 Vigna mungo
Zm00001eb291870 Zea mays

User provided reference genes

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