Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p44150 Brassica napus
A09p09280 Brassica napus
Aa31LG1G16100 Aethionema arabicum
Actinidia34575 Actinidia chinensis
Ah.02g125400 Amaranthus hybridus
Ah.13g073590 Amaranthus hybridus
AL8G43750 Arabidopsis lyrata
Aqoxy4G00265 Aquilegia oxysepala
Aqoxy6G02607 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01HRZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7H1L6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IHLH1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2NQJ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L590LZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NI516C Arachis hypogaea
AT5G67550 Arabidopsis thaliana
ATR0743G154 Amborella trichopoda
Atru.chr3.1013 Acer truncatum
Atru.chr4.1282 Acer truncatum
AUR62002358 Chenopodium quinoa
AUR62004011 Chenopodium quinoa
AUR62023827 Chenopodium quinoa
AUR62040236 Chenopodium quinoa
BcaB04g20046 Brassica carinata
BcaC03g18365 Brassica carinata
BcaC03g18366 Brassica carinata
BcaC04g23234 Brassica carinata
BolC2t12505H Brassica oleracea
BolC9t53979H Brassica oleracea
BraA02t09338Z Brassica rapa
BraA09t36581Z Brassica rapa
C02p64410 Brassica napus
C09p10860 Brassica napus
CAN.G1075.39 Capsicum annuum
CAN.G65.160 Capsicum annuum
CANSAT78G0998 Cannabis sativa
CARHR280040 Cardamine hirsuta
Carub.0008s2692 Capsella rubella
Ca_01244_v3 Cicer arietinum L.
Ca_24691_v3 Cicer arietinum L.
Cc03_g12310 Coffea canephora
Cc07_g07110 Coffea canephora
CDE02G1048 Ceratophyllum demersum
Ciclev10019609m.g Citrus clementina
Ciclev10027120m.g Citrus clementina
CiPaw.01G004400 Carya illinoinensis
CiPaw.01G095400 Carya illinoinensis
ClCG07G011700 Citrullus lanatus
COL.COLO4_06571 Corchorus olitorius
COL.COLO4_11579 Corchorus olitorius
Cpa.g.sc6.14 Carica papaya
Cpa.g.sc9.325 Carica papaya
CsaV3_4G002510 Cucumis sativus L.
CSS0003630 Camellia sinensis var. sinensis
CSS0005943 Camellia sinensis var. sinensis
CSS0014989 Camellia sinensis var. sinensis
CSS0015309 Camellia sinensis var. sinensis
CSS0029503 Camellia sinensis var. sinensis
DCAR_028419 Daucus carota
Dinv05088 Davidia involucrata
Dinv26934 Davidia involucrata
Duzib147G1538 Durio zibethinus
Duzib151G0337 Durio zibethinus
Duzib151G0353 Durio zibethinus
ECA232G0232 Erigeron canadensis
ECA240G0473 Erigeron canadensis
EL10Ac3g06022 Beta vulgaris
EL10Ac6g15616 Beta vulgaris
EL10Ac6g15617 Beta vulgaris
Eucgr.H00339 Eucalyptus grandis
Eucgr.H02308 Eucalyptus grandis
FAN19G1943 Fragaria x ananassa
FAN19G2514 Fragaria x ananassa
FAN23G1757 Fragaria x ananassa
FAN23G1924 Fragaria x ananassa
FvH4_1g17730 Fragaria vesca
FvH4_1g17750 Fragaria vesca
Glyma.11G047500 Glycine max
Glyma.12G050400 Glycine max
Glyma.13G345900 Glycine max
Glyma.15G028400 Glycine max
Gohir.A10G140900 Gossypium hirsutum
Gohir.A11G214800 Gossypium hirsutum
Gohir.D10G126000 Gossypium hirsutum
Gohir.D11G208600 Gossypium hirsutum
Gorai.007G223600 Gossypium raimondii
Gorai.011G139000 Gossypium raimondii
GSVIVG01000104001 Vitis vinifera
GSVIVG01002076001 Vitis vinifera
GSVIVG01004107001 Vitis vinifera
HanXRQChr03g0090201 Helianthus annuus
HanXRQChr12g0373031 Helianthus annuus
HanXRQChr13g0419461 Helianthus annuus
HanXRQChr13g0419471 Helianthus annuus
Haze_15281 Corylus avellana
Hma1.2p1_0487F.1_g163580 Hydrangea macrophylla
Hma1.2p1_0808F.1_g221640 Hydrangea macrophylla
HPP92_020411 Vanilla planifolia
HPP92_023721 Vanilla planifolia
Hund12400 Selenicereus undatus
Hund13953 Selenicereus undatus
Lalb_Chr03g0025981 Lupinus albus
Lalb_Chr03g0025991 Lupinus albus
Lalb_Chr09g0323611 Lupinus albus
Lalb_Chr24g0396721 Lupinus albus
Lj2g0021519 Lotus japonicus
Lj3g0000361 Lotus japonicus
Lj3g0022705 Lotus japonicus
Lj6A108T23 Lonicera japonica
Lj7A98G7 Lonicera japonica
Lsat_1_v5_gn_3_111480 Lactuca sativa
Lsat_1_v5_gn_4_161620 Lactuca sativa
Manes.04G047800 Manihot esculenta
Manes.11G126100 Manihot esculenta
Manes.12G114901 Manihot esculenta
MBI07_g05949_MAGBIO Magnolia biondii
MBI07_g05950_MAGBIO Magnolia biondii
MBI07_g05951_MAGBIO Magnolia biondii
MBI16_g23887_MAGBIO Magnolia biondii
MD02G1186300 Malus domestica
MD04G1046200 Malus domestica
Medtr2g099140 Medicago truncatula
Medtr5g015390 Medicago truncatula
MELO3C000155.2 Cucumis melo
MELO3C017794.2 Cucumis melo
MELO3C031865.2 Cucumis melo
Migut.H00346 Erythranthe guttata
Migut.N03092 Erythranthe guttata
MSTRG.22013 Avicennia marina
MSTRG.24571 Avicennia marina
MSTRG.4290 Avicennia marina
Nitab4.5_0000142g0080 Nicotiana tabacum
Nitab4.5_0000242g0110 Nicotiana tabacum
Nitab4.5_0001521g0050 Nicotiana tabacum
Nitab4.5_0001586g0230 Nicotiana tabacum
Nitab4.5_0002119g0070 Nicotiana tabacum
Nitab4.5_0002553g0050 Nicotiana tabacum
Nitab4.5_0022768g0010 Nicotiana tabacum
Nitab4.5_0022768g0020 Nicotiana tabacum
Nn1g09564 Nelumbo nucifera
Nn7g37566 Nelumbo nucifera
Oeu011986.1 Olea europaea
Oeu022687.1 Olea europaea
Oeu035112.1 Olea europaea
Oeu035189.1 Olea europaea
Os11g0264500 Oryza sativa ssp. japonica
Peaxi162Scf00075g01551 Petunia axillaris
Peaxi162Scf00180g00520 Petunia axillaris
Peaxi162Scf00548g00615 Petunia axillaris
PGR102G0884 Punica granatum
PGR142G1686 Punica granatum
PGSC0003DMG400014614 Solanum tuberosum
PGSC0003DMG400021416 Solanum tuberosum
PGSC0003DMG400026919 Solanum tuberosum
Phvul.002G010500 Phaseolus vulgaris
Phvul.005G154700 Phaseolus vulgaris
Phvul.011G052700 Phaseolus vulgaris
Potri.007G132601 Populus trichocarpa
Potri.017G023400 Populus trichocarpa
Pp3c20_23920 Physcomitrium patens
Prupe.1G199700 Prunus persica
Prupe.6G220300 Prunus persica
Psat2g171600 Pisum sativum
Psat5g290560 Pisum sativum
Psat7g052200 Pisum sativum
PSO017G4804 Papaver somniferum
PSO541G1933 Papaver somniferum
PSO675G8643 Papaver somniferum
PSO837G0062 Papaver somniferum
QL06p039562 Quercus lobata
QL10p051682 Quercus lobata
RcHm_v2.0_Chr2g0108061 Rosa chinensis
Rhsim08G0093400 Rhododendron simsii
Rhsim09G0017900 Rhododendron simsii
Sabra07G0107600 Salix brachista
Sabra07G0119400 Salix brachista
Sabra17G0001800 Salix brachista
SalBow2G0231 Salvia bowleyana
SalBow6G7191 Salvia bowleyana
Sc07g0000540 Simmondsia chinensis
Sed0026282 Sechium edule
SEGI_41356 Sequoiadendron giganteum
SGA_v2.0_scaffold120G33008 Striga asiatica
SGA_v2.0_scaffold15G07460 Striga asiatica
SMO011G0033 Selaginella moellendorffii
SMO118G0027 Selaginella moellendorffii
SMO364G0048 Selaginella moellendorffii
Solyc02g092340.2 Solanum lycopersicum
Solyc02g092350.3 Solanum lycopersicum
Solyc03g060520.1 Solanum lycopersicum
Solyc06g073140.2 Solanum lycopersicum
Solyc08g014010.4 Solanum lycopersicum
Solyc12g042120.3 Solanum lycopersicum
Sopen02g036900 Solanum pennellii
Sopen03g014490 Solanum pennellii
Sopen06g029490 Solanum pennellii
Sopen08g004890 Solanum pennellii
Sopen12g021200 Solanum pennellii
Sp2g29100 Schrenkiella parvula
TAR362G0372 Trochodendron aralioides
TAR381G1137 Trochodendron aralioides
TAR633G0315 Trochodendron aralioides
TAR633G1477 Trochodendron aralioides
TAR633G1709 Trochodendron aralioides
THA.LOC104804510 Tarenaya hassleriana
THA.LOC104827634 Tarenaya hassleriana
Thecc.01G072900 Theobroma cacao
Thecc.04G172800 Theobroma cacao
Thhalv10005509m.g Eutrema salsugineum
TPR.G40544 Trifolium pratense
TPR.G6513 Trifolium pratense
TPR.G9937 Trifolium pratense
TWI38G2174 Tripterygium wilfordii
TWI63G1624 Tripterygium wilfordii
TWI73G0373 Tripterygium wilfordii
unitig_578.g16252 Utricularia gibba
vmacro00673 Vaccinium macrocarpon
vmacro18025 Vaccinium macrocarpon
VMungo1080G0015 Vigna mungo
VMungo1080G1867 Vigna mungo
VMungo1127G0037 Vigna mungo
VMungo1127G1949 Vigna mungo
VMungo1215G2377 Vigna mungo
Zm00001eb168740 Zea mays

User provided reference genes

Program Settings