Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16050 Brassica napus
A01p25870 Brassica napus
A02p12840 Brassica napus
A03p27710 Brassica napus
A10p08490 Brassica napus
Aa31sc646G10 Aethionema arabicum
Actinidia08036 Actinidia chinensis
Actinidia08963 Actinidia chinensis
Actinidia08968 Actinidia chinensis
Ah.08g218700 Amaranthus hybridus
AL7G28470 Arabidopsis lyrata
AL8G24230 Arabidopsis lyrata
Aqoxy5G01805 Aquilegia oxysepala
Aqoxy5G03717 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.51G7A0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M19IEM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8YI67 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UBG8L8 Arachis hypogaea
AT4G24715 Arabidopsis thaliana
AT5G50200 Arabidopsis thaliana
ATR0122G001 Amborella trichopoda
ATR0133G001 Amborella trichopoda
ATR0133G004 Amborella trichopoda
ATR0620G072 Amborella trichopoda
ATR0824G145 Amborella trichopoda
Atru.chr9.2594 Acer truncatum
AUR62001198 Chenopodium quinoa
AUR62022130 Chenopodium quinoa
BcaB01g02912 Brassica carinata
BcaB05g23578 Brassica carinata
BcaB05g24060 Brassica carinata
BcaB08g35384 Brassica carinata
BcaC01g04825 Brassica carinata
BcaC03g14656 Brassica carinata
BcaC04g20815 Brassica carinata
BcaC09g49806 Brassica carinata
BcaC09g50837 Brassica carinata
BcaNung07360 Brassica carinata
BolC1t01931H Brassica oleracea
BolC2t08229H Brassica oleracea
BolC9t56749H Brassica oleracea
BraA01t02506Z Brassica rapa
BraA02t06340Z Brassica rapa
BraSC37t46156Z Brassica rapa
C01p20040 Brassica napus
C01p32760 Brassica napus
C02p20890 Brassica napus
C03p33420 Brassica napus
C09p38850 Brassica napus
CAN.G126.45 Capsicum annuum
CAN.G338.50 Capsicum annuum
CAN.G338.53 Capsicum annuum
CANSAT01G1686 Cannabis sativa
CANSAT80G2485 Cannabis sativa
CARHR258420 Cardamine hirsuta
Carub.0007s1634 Capsella rubella
Carub.0008s1021 Capsella rubella
Ca_19421_v3 Cicer arietinum L.
Cc04_g11360 Coffea canephora
Cc04_g11370 Coffea canephora
CDE06G1658 Ceratophyllum demersum
CDE09G0362 Ceratophyllum demersum
Cfa019230 Carpinus fangiana
Ciclev10033654m.g Citrus clementina
CiPaw.11G018800 Carya illinoinensis
CiPaw.12G032000 Carya illinoinensis
ClCG03G003060 Citrullus lanatus
COL.COLO4_03771 Corchorus olitorius
Cpa.g.sc968.2 Carica papaya
CsaV3_1G008910 Cucumis sativus L.
CSS0018467 Camellia sinensis var. sinensis
CSS0034664 Camellia sinensis var. sinensis
DCAR_000427 Daucus carota
DCAR_000428 Daucus carota
DCAR_016446 Daucus carota
DCAR_016447 Daucus carota
DCAR_016448 Daucus carota
DCAR_021595 Daucus carota
DCAR_021596 Daucus carota
Dinv14735 Davidia involucrata
Dinv20592 Davidia involucrata
Dinv38519 Davidia involucrata
Duzib205G0131 Durio zibethinus
ECA232G2306 Erigeron canadensis
ECA232G3817 Erigeron canadensis
ECA246G4669 Erigeron canadensis
EL10Ac7g17986 Beta vulgaris
Eucgr.B00213 Eucalyptus grandis
FAN04G0249 Fragaria x ananassa
FAN04G1185 Fragaria x ananassa
FAN04G1372 Fragaria x ananassa
FAN08G0507 Fragaria x ananassa
FAN08G1195 Fragaria x ananassa
FAN08G2517 Fragaria x ananassa
FAN13G2161 Fragaria x ananassa
FAN18G1612 Fragaria x ananassa
FAN18G3887 Fragaria x ananassa
FvH4_5g06392 Fragaria vesca
FvH4_5g06400 Fragaria vesca
Glyma.05G042200 Glycine max
Glyma.17G124900 Glycine max
Gohir.A03G074850 Gossypium hirsutum
Gohir.A07G056100 Gossypium hirsutum
Gohir.D03G101600 Gossypium hirsutum
Gohir.D07G060400 Gossypium hirsutum
Gorai.001G064100 Gossypium raimondii
GSVIVG01007624001 Vitis vinifera
HanXRQChr05g0156191 Helianthus annuus
HanXRQChr09g0272551 Helianthus annuus
HanXRQChr09g0272561 Helianthus annuus
HanXRQChr09g0272571 Helianthus annuus
HanXRQChr09g0272591 Helianthus annuus
HanXRQChr10g0296001 Helianthus annuus
HanXRQChr16g0504761 Helianthus annuus
HanXRQChr17g0569521 Helianthus annuus
Haze_07597 Corylus avellana
Hma1.2p1_0046F.1_g027250 Hydrangea macrophylla
HPP92_024277 Vanilla planifolia
Hund18487 Selenicereus undatus
Lalb_Chr07g0183011 Lupinus albus
Lalb_Chr08g0236821 Lupinus albus
Lj3P1060T38 Lonicera japonica
Lj4g0007813 Lotus japonicus
Lj5A131T29 Lonicera japonica
Lj5C131T0 Lonicera japonica
Lsat_1_v5_gn_4_3961 Lactuca sativa
Lsat_1_v5_gn_4_77480 Lactuca sativa
Lsat_1_v5_gn_4_77500 Lactuca sativa
Lsat_1_v5_gn_4_77520 Lactuca sativa
Lsat_1_v5_gn_4_77580 Lactuca sativa
Lsat_1_v5_gn_5_13980 Lactuca sativa
Manes.06G046000 Manihot esculenta
Manes.06G111400 Manihot esculenta
Manes.14G059800 Manihot esculenta
Mapoly0020s0036 Marchantia polymorpha
Mapoly0020s0039 Marchantia polymorpha
Mapoly0020s0042 Marchantia polymorpha
Mapoly0020s0047 Marchantia polymorpha
Mapoly0020s0049 Marchantia polymorpha
Mapoly0054s0096 Marchantia polymorpha
Mapoly0112s0029 Marchantia polymorpha
Mapoly0172s0019 Marchantia polymorpha
Mapoly1022s0002 Marchantia polymorpha
Mapoly1609s0001 Marchantia polymorpha
MBI10_g32561_MAGBIO Magnolia biondii
MD06G1164900 Malus domestica
MD14G1170300 Malus domestica
Medtr4g104700 Medicago truncatula
Medtr4g104730 Medicago truncatula
MELO3C002305.2 Cucumis melo
Migut.D02025 Erythranthe guttata
Migut.L00362 Erythranthe guttata
Migut.L00541 Erythranthe guttata
Migut.O00168 Erythranthe guttata
Migut.O00169 Erythranthe guttata
Migut.O00170 Erythranthe guttata
Migut.O00256 Erythranthe guttata
MSTRG.4349 Avicennia marina
Nitab4.5_0002522g0050 Nicotiana tabacum
Nitab4.5_0002522g0100 Nicotiana tabacum
Nitab4.5_0003741g0010 Nicotiana tabacum
Nitab4.5_0008037g0050 Nicotiana tabacum
Nitab4.5_0008037g0060 Nicotiana tabacum
Nn3g16679 Nelumbo nucifera
Nn3g16680 Nelumbo nucifera
Nn4g22576 Nelumbo nucifera
Oeu036016.1 Olea europaea
Oeu036018.1 Olea europaea
Oeu044590.1 Olea europaea
Os02g0595900 Oryza sativa ssp. japonica
Os04g0480200 Oryza sativa ssp. japonica
Peaxi162Scf00089g01210 Petunia axillaris
Peaxi162Scf00089g01241 Petunia axillaris
Peaxi162Scf00801g00210 Petunia axillaris
Peaxi162Scf00801g00310 Petunia axillaris
PGR083G1476 Punica granatum
PGSC0003DMG400018129 Solanum tuberosum
Phvul.003G205900 Phaseolus vulgaris
Potri.012G089300 Populus trichocarpa
Potri.015G085000 Populus trichocarpa
Potri.015G085100 Populus trichocarpa
Pp3c18_3270 Physcomitrium patens
Pp3c21_13230 Physcomitrium patens
Pp3c22_21950 Physcomitrium patens
Prupe.5G164500 Prunus persica
Psat4g061680 Pisum sativum
PSO017G0042 Papaver somniferum
PSO384G2414 Papaver somniferum
PSO478G0922 Papaver somniferum
PSO478G1458 Papaver somniferum
QL10p006666 Quercus lobata
RcHm_v2.0_Chr7g0192371 Rosa chinensis
RcHm_v2.0_Chr7g0192381 Rosa chinensis
RcHm_v2.0_Chr7g0192401 Rosa chinensis
Rhsim12G0168400 Rhododendron simsii
Sabra12G0064300 Salix brachista
Sabra15G0108000 Salix brachista
Sc04g0001390 Simmondsia chinensis
Sc04g0001400 Simmondsia chinensis
Sed0015834 Sechium edule
SEGI_10055 Sequoiadendron giganteum
SEGI_35903 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27828 Striga asiatica
SGA_v2.0_scaffold90G27830 Striga asiatica
SMO347G0338 Selaginella moellendorffii
Solyc03g112090.3 Solanum lycopersicum
Solyc03g112100.3 Solanum lycopersicum
Sopen03g031190 Solanum pennellii
Sopen03g031200 Solanum pennellii
Sp6g12300 Schrenkiella parvula
Sp7g22700 Schrenkiella parvula
TAR371G0478 Trochodendron aralioides
TAR622G0418 Trochodendron aralioides
TAR629G2355 Trochodendron aralioides
THA.LOC104824990 Tarenaya hassleriana
Thecc.03G116100 Theobroma cacao
Thhalv10014669m.g Eutrema salsugineum
Thhalv10027123m.g Eutrema salsugineum
TPR.G37580 Trifolium pratense
TWI23G0536 Tripterygium wilfordii
unitig_0.g1416 Utricularia gibba
vmacro19289 Vaccinium macrocarpon
VMungo1215G1367 Vigna mungo
Zm00001eb079530 Zea mays
Zm00001eb246140 Zea mays

User provided reference genes

Program Settings