Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06030 Brassica napus
A03p09810 Brassica napus
Aa31sc72G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2498 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2502 Anthoceros agrestis
Actinidia16183 Actinidia chinensis
Actinidia25596 Actinidia chinensis
AL6G31640 Arabidopsis lyrata
Aqoxy4G02782 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0WM0I5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DHD00G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DKYG6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EV6WBG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G15V58 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UHEV4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XWK90S Arachis hypogaea
AT5G20090 Arabidopsis thaliana
ATR0686G113 Amborella trichopoda
Atru.chr6.2515 Acer truncatum
Atru.chr6.2516 Acer truncatum
Atru.chr9.1040 Acer truncatum
Atru.chr9.1095 Acer truncatum
AUR62012771 Chenopodium quinoa
AUR62021887 Chenopodium quinoa
BcaB01g04809 Brassica carinata
BcaB05g22874 Brassica carinata
BcaC03g13731 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01810 Brassica napus
BolC2t07008H Brassica oleracea
BolC2t07013H Brassica oleracea
BolC3t13613H Brassica oleracea
BraA02t05554Z Brassica rapa
BraA03t10296Z Brassica rapa
C03p11390 Brassica napus
CAN.G1046.4 Capsicum annuum
CAN.G514.4 Capsicum annuum
CAN.G567.42 Capsicum annuum
CAN.G792.31 Capsicum annuum
CANSAT56G1575 Cannabis sativa
CANSAT64G0161 Cannabis sativa
CARHR192740 Cardamine hirsuta
Carub.0006s1847 Capsella rubella
Ca_11201_v3 Cicer arietinum L.
Cc03_g13260 Coffea canephora
Cc04_g09980 Coffea canephora
Cfa018864 Carpinus fangiana
Ciclev10017246m.g Citrus clementina
Ciclev10022969m.g Citrus clementina
CiPaw.03G052500 Carya illinoinensis
CiPaw.11G010100 Carya illinoinensis
CiPaw.12G037100 Carya illinoinensis
ClCG01G016480 Citrullus lanatus
ClCG06G017740 Citrullus lanatus
COL.COLO4_08760 Corchorus olitorius
COL.COLO4_28067 Corchorus olitorius
Cpa.g.sc190.34 Carica papaya
Cre02.g113100 Chlamydomonas reinhardtii
CsaV3_1G000720 Cucumis sativus L.
CsaV3_6G042760 Cucumis sativus L.
CSS0000294 Camellia sinensis var. sinensis
CSS0028119 Camellia sinensis var. sinensis
DCAR_026215 Daucus carota
Dinv04859 Davidia involucrata
Dinv11149 Davidia involucrata
Dinv25677 Davidia involucrata
Duzib041G0358 Durio zibethinus
Duzib068G0787 Durio zibethinus
Duzib084G0793 Durio zibethinus
Duzib147G1121 Durio zibethinus
Duzib205G0561 Durio zibethinus
ECA232G2347 Erigeron canadensis
ECA247G2677 Erigeron canadensis
EL10Ac8g20149 Beta vulgaris
Eucgr.B01103 Eucalyptus grandis
Eucgr.J01698 Eucalyptus grandis
Eucgr.K02742 Eucalyptus grandis
FAN08G3214 Fragaria x ananassa
FAN13G2883 Fragaria x ananassa
FAN18G0447 Fragaria x ananassa
FvH4_5g07370 Fragaria vesca
FvH4_5g07810 Fragaria vesca
Glyma.07G156300 Glycine max
Glyma.10G280800 Glycine max
Glyma.15G246900 Glycine max
Glyma.16G059801 Glycine max
Glyma.16G059900 Glycine max
Glyma.19G087200 Glycine max
Glyma.19G087300 Glycine max
Glyma.20G108800 Glycine max
Gohir.A07G052600 Gossypium hirsutum
Gohir.A09G246300 Gossypium hirsutum
Gohir.A11G064600 Gossypium hirsutum
Gohir.A12G276925 Gossypium hirsutum
Gohir.D07G057000 Gossypium hirsutum
Gohir.D09G246900 Gossypium hirsutum
Gohir.D11G068900 Gossypium hirsutum
Gohir.D13G181600 Gossypium hirsutum
Gorai.001G060500 Gossypium raimondii
Gorai.006G271400 Gossypium raimondii
Gorai.007G073700 Gossypium raimondii
Gorai.013G207300 Gossypium raimondii
GSVIVG01008499001 Vitis vinifera
HanXRQChr02g0035201 Helianthus annuus
HanXRQChr03g0077971 Helianthus annuus
HanXRQChr04g0100341 Helianthus annuus
HanXRQChr04g0102751 Helianthus annuus
HanXRQChr04g0110841 Helianthus annuus
HanXRQChr04g0110881 Helianthus annuus
HanXRQChr04g0110901 Helianthus annuus
HanXRQChr09g0272991 Helianthus annuus
HanXRQChr09g0273001 Helianthus annuus
HanXRQChr16g0497831 Helianthus annuus
HanXRQChr17g0548771 Helianthus annuus
Haze_07246 Corylus avellana
Haze_14836 Corylus avellana
Hma1.2p1_0014F.1_g009730 Hydrangea macrophylla
HPP92_015510 Vanilla planifolia
Hund05514 Selenicereus undatus
Hund18319 Selenicereus undatus
Lalb_Chr02g0143341 Lupinus albus
Lalb_Chr22g0360511 Lupinus albus
Lj1g0007853 Lotus japonicus
Lj5g0005551 Lotus japonicus
Lsat_1_v5_gn_1_29320 Lactuca sativa
Lsat_1_v5_gn_4_76481 Lactuca sativa
Manes.06G117600 Manihot esculenta
Manes.14G053700 Manihot esculenta
Manes.17G105800 Manihot esculenta
Mapoly0090s0007 Marchantia polymorpha
MCO09G314 Micromonas commoda
MD06G1147100 Malus domestica
MD14G1161000 Malus domestica
Medtr1g112340 Medicago truncatula
Medtr7g031440 Medicago truncatula
MELO3C026223.2 Cucumis melo
Migut.D01240 Erythranthe guttata
Migut.I00518 Erythranthe guttata
MSTRG.11289 Avicennia marina
MSTRG.22909 Avicennia marina
Nitab4.5_0000530g0020 Nicotiana tabacum
Nitab4.5_0000955g0040 Nicotiana tabacum
Nitab4.5_0002367g0100 Nicotiana tabacum
Nitab4.5_0002793g0040 Nicotiana tabacum
Nitab4.5_0003103g0040 Nicotiana tabacum
Nitab4.5_0005627g0070 Nicotiana tabacum
Nitab4.5_0009013g0040 Nicotiana tabacum
Nn1g02027 Nelumbo nucifera
Nn6g33422 Nelumbo nucifera
Os08g0412500 Oryza sativa ssp. japonica
Os09g0373000 Oryza sativa ssp. japonica
Peaxi162Scf00074g00542 Petunia axillaris
Peaxi162Scf00479g00120 Petunia axillaris
Peaxi162Scf00479g00210 Petunia axillaris
Peaxi162Scf00536g00035 Petunia axillaris
Peaxi162Scf00763g00327 Petunia axillaris
Peaxi162Scf00844g00027 Petunia axillaris
PGR083G1009 Punica granatum
PGSC0003DMG400008270 Solanum tuberosum
PGSC0003DMG400012255 Solanum tuberosum
PGSC0003DMG400026982 Solanum tuberosum
PGSC0003DMG402005796 Solanum tuberosum
Phvul.001G083800 Phaseolus vulgaris
Phvul.007G020100 Phaseolus vulgaris
Phvul.008G092700 Phaseolus vulgaris
Potri.001G333902 Populus trichocarpa
Potri.012G095133 Populus trichocarpa
Potri.015G092500 Populus trichocarpa
Pp3c11_21580 Physcomitrium patens
Prupe.1G584200 Prunus persica
Prupe.5G153900 Prunus persica
Psat3g180520 Pisum sativum
Psat6g231600 Pisum sativum
PSO063G3365 Papaver somniferum
PSO063G3438 Papaver somniferum
PSO063G4591 Papaver somniferum
PSO063G7298 Papaver somniferum
PSO541G6491 Papaver somniferum
PSO675G4277 Papaver somniferum
PSO782G4772 Papaver somniferum
QL02p072436 Quercus lobata
QL10p004470 Quercus lobata
RcHm_v2.0_Chr7g0190651 Rosa chinensis
Rhsim05G0177100 Rhododendron simsii
Rhsim08G0187400 Rhododendron simsii
Rhsim12G0173200 Rhododendron simsii
Sabra12G0069800 Salix brachista
Sabra15G0114300 Salix brachista
SalBow1G8061 Salvia bowleyana
SalBow5G3501 Salvia bowleyana
SalBow5G4523 Salvia bowleyana
Sc10g0010410 Simmondsia chinensis
Sed0006367 Sechium edule
Sed0010598 Sechium edule
SEGI_41174 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14620 Striga asiatica
SGA_v2.0_scaffold5G02876 Striga asiatica
SMO118G0374 Selaginella moellendorffii
SMO118G0466 Selaginella moellendorffii
SMO169G0135 Selaginella moellendorffii
Solyc06g071890.3 Solanum lycopersicum
Solyc08g008420.3 Solanum lycopersicum
Solyc08g082755.1 Solanum lycopersicum
Solyc10g051120.3 Solanum lycopersicum
Sopen06g028170 Solanum pennellii
Sopen08g004280 Solanum pennellii
Sopen08g031000 Solanum pennellii
Sopen10g022820 Solanum pennellii
Sp6g24320 Schrenkiella parvula
THA.LOC104811600 Tarenaya hassleriana
THA.LOC104825010 Tarenaya hassleriana
Thecc.03G125400 Theobroma cacao
Thecc.04G030400 Theobroma cacao
Thhalv10015066m.g Eutrema salsugineum
TPR.G2446 Trifolium pratense
TPR.G38310 Trifolium pratense
TWI14G0604 Tripterygium wilfordii
TWI39G0033 Tripterygium wilfordii
vmacro16665 Vaccinium macrocarpon
vmacro19221 Vaccinium macrocarpon
vmacro20469 Vaccinium macrocarpon
VMungo0720G2341 Vigna mungo
VMungo1383G0843 Vigna mungo
Zm00001eb061480 Zea mays
Zm00001eb061490 Zea mays
Zm00001eb212590 Zea mays

User provided reference genes

Program Settings