Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26080 Brassica napus
A03p06960 Brassica napus
A06p20820 Brassica napus
A10p16480 Brassica napus
Aa31LG4G15670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3638 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1395 Anthoceros agrestis
Actinidia08540 Actinidia chinensis
Actinidia26677 Actinidia chinensis
Actinidia33774 Actinidia chinensis
Ah.08g219900 Amaranthus hybridus
Ah.15g098580 Amaranthus hybridus
AL5G25720 Arabidopsis lyrata
AL6G42790 Arabidopsis lyrata
AL8G35700 Arabidopsis lyrata
Aqoxy2G02292 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0C0BSE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.119CG3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HN9X0L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZH5ZT Arachis hypogaea
AT1G35860 Arabidopsis thaliana
AT1G35880 Arabidopsis thaliana
AT3G46740 Arabidopsis thaliana
AT4G09080 Arabidopsis thaliana
ATR0559G031 Amborella trichopoda
ATR0559G239 Amborella trichopoda
ATR0559G340 Amborella trichopoda
Atru.chr3.3955 Acer truncatum
AUR62001746 Chenopodium quinoa
AUR62020025 Chenopodium quinoa
BcaB01g00984 Brassica carinata
BcaB02g10711 Brassica carinata
BcaB05g23534 Brassica carinata
BcaB05g23535 Brassica carinata
BcaB05g23536 Brassica carinata
BcaB08g36270 Brassica carinata
BcaC01g01890 Brassica carinata
BcaC04g19797 Brassica carinata
BcaC04g23201 Brassica carinata
BcaC04g23202 Brassica carinata
BcaC09g49767 Brassica carinata
BolC1t03253H Brassica oleracea
BolC3t13292H Brassica oleracea
BolC3t19366H Brassica oleracea
BolC9t54008H Brassica oleracea
BolC9t58015H Brassica oleracea
BraA01t02526Z Brassica rapa
BraA03t10018Z Brassica rapa
BraA06t25157Z Brassica rapa
BraA10t43731Z Brassica rapa
C01p33160 Brassica napus
C03p07950 Brassica napus
C03p70910 Brassica napus
C09p11190 Brassica napus
C09p51560 Brassica napus
CAN.G394.74 Capsicum annuum
CANSAT54G1677 Cannabis sativa
CARHR154930 Cardamine hirsuta
CARHR285600 Cardamine hirsuta
CARHR285610 Cardamine hirsuta
Carub.0005s1300 Capsella rubella
Carub.0008s1993 Capsella rubella
Ca_01305_v3 Cicer arietinum L.
Ca_20619_v3 Cicer arietinum L.
CBR_g26093 Chara braunii
Cc01_g13290 Coffea canephora
CDE04G0292 Ceratophyllum demersum
CDE06G2097 Ceratophyllum demersum
Cfa011544 Carpinus fangiana
Cfa011547 Carpinus fangiana
Ciclev10027835m.g Citrus clementina
CiPaw.13G090000 Carya illinoinensis
CiPaw.13G090100 Carya illinoinensis
CiPaw.14G065900 Carya illinoinensis
ClCG03G001310 Citrullus lanatus
COL.COLO4_18570 Corchorus olitorius
Cpa.g.sc81.103 Carica papaya
Cre03.g175200 Chlamydomonas reinhardtii
CsaV3_1G034510 Cucumis sativus L.
CSS0005170 Camellia sinensis var. sinensis
CSS0026296 Camellia sinensis var. sinensis
DCAR_005948 Daucus carota
DCAR_007432 Daucus carota
Dinv34276 Davidia involucrata
Dinv42985 Davidia involucrata
Dinv43114 Davidia involucrata
Duzib170G0098 Durio zibethinus
ECA234G0406 Erigeron canadensis
ECA247G2855 Erigeron canadensis
ECA248G0534 Erigeron canadensis
ECA248G3037 Erigeron canadensis
EL10Ac7g16059 Beta vulgaris
Eucgr.B02312 Eucalyptus grandis
FAN04G2806 Fragaria x ananassa
FAN08G1552 Fragaria x ananassa
FAN11G2976 Fragaria x ananassa
FAN13G2534 Fragaria x ananassa
FAN16G2241 Fragaria x ananassa
FAN18G0944 Fragaria x ananassa
FAN21G2726 Fragaria x ananassa
FvH4_3g28760 Fragaria vesca
FvH4_5g29410 Fragaria vesca
Glyma.13G338700 Glycine max
Glyma.15G035600 Glycine max
Gohir.A05G093400 Gossypium hirsutum
Gohir.A07G100300 Gossypium hirsutum
Gohir.A13G226800 Gossypium hirsutum
Gohir.D05G093900 Gossypium hirsutum
Gohir.D07G104400 Gossypium hirsutum
Gohir.D13G232100 Gossypium hirsutum
Gorai.001G112300 Gossypium raimondii
Gorai.009G096900 Gossypium raimondii
Gorai.013G262900 Gossypium raimondii
GSVIVG01024913001 Vitis vinifera
HanXRQChr01g0010431 Helianthus annuus
HanXRQChr04g0109241 Helianthus annuus
Haze_24151 Corylus avellana
Haze_24153 Corylus avellana
Hma1.2p1_0615F.1_g189710 Hydrangea macrophylla
HPP92_010648 Vanilla planifolia
HPP92_010725 Vanilla planifolia
Hund04925 Selenicereus undatus
Lalb_Chr00c24g0406641 Lupinus albus
Lalb_Chr14g0372011 Lupinus albus
Lalb_Chr22g0352461 Lupinus albus
Lj2A1068G37 Lonicera japonica
Lj2A1068T38 Lonicera japonica
Lj2C969T9 Lonicera japonica
Lj3g0007907 Lotus japonicus
LjContig00081g0003615 Lotus japonicus
Lsat_1_v5_gn_0_20160 Lactuca sativa
Lsat_1_v5_gn_4_171681 Lactuca sativa
Lsat_1_v5_gn_5_122240 Lactuca sativa
Lsat_1_v5_gn_5_169481 Lactuca sativa
Manes.01G169900 Manihot esculenta
Mapoly0040s0008 Marchantia polymorpha
MBI14_g08021_MAGBIO Magnolia biondii
MBI14_g08024_MAGBIO Magnolia biondii
MCO13G202 Micromonas commoda
MD03G1086500 Malus domestica
MD11G1095600 Malus domestica
Medtr2g097700 Medicago truncatula
Medtr4g064780 Medicago truncatula
Medtr5g013940 Medicago truncatula
MELO3C020610.2 Cucumis melo
Migut.C00447 Erythranthe guttata
Migut.D00882 Erythranthe guttata
Migut.J01162 Erythranthe guttata
MSTRG.21224 Avicennia marina
Nitab4.5_0000463g0160 Nicotiana tabacum
Nitab4.5_0006916g0010 Nicotiana tabacum
Nn2g11182 Nelumbo nucifera
Oeu023933.1 Olea europaea
Oeu029130.1 Olea europaea
Oeu045617.1 Olea europaea
Oeu053870.2 Olea europaea
Oeu053885.1 Olea europaea
Os03g0271200 Oryza sativa ssp. japonica
Os11g0116500 Oryza sativa ssp. japonica
Os12g0115950 Oryza sativa ssp. japonica
Peaxi162Scf00481g00322 Petunia axillaris
Peaxi162Scf00649g00054 Petunia axillaris
PGR102G2695 Punica granatum
PGSC0003DMG400030420 Solanum tuberosum
Phvul.L007943 Phaseolus vulgaris
Potri.001G072800 Populus trichocarpa
Potri.003G158100 Populus trichocarpa
Pp3c20_17440 Physcomitrium patens
Pp3c20_19840 Physcomitrium patens
Pp3c5_23090 Physcomitrium patens
Pp3c6_10010 Physcomitrium patens
Pp3c7_23430 Physcomitrium patens
PRCOL_00000105 Prasinoderma coloniale
Prupe.6G071100 Prunus persica
Psat5g118680 Pisum sativum
Psat7g209800 Pisum sativum
PSO063G2647 Papaver somniferum
PSO339G0816 Papaver somniferum
PSO339G4558 Papaver somniferum
PSO513G0035 Papaver somniferum
QL01p030425 Quercus lobata
RcHm_v2.0_Chr5g0052291 Rosa chinensis
RcHm_v2.0_Chr7g0222311 Rosa chinensis
Rhsim13G0077600 Rhododendron simsii
Sabra01G0051400 Salix brachista
Sabra03G0114700 Salix brachista
SalBow1G3349 Salvia bowleyana
SalBow6G3018 Salvia bowleyana
Sc12g0001270 Simmondsia chinensis
Sed0022880 Sechium edule
SEGI_38607 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07084 Striga asiatica
SGA_v2.0_scaffold66G22395 Striga asiatica
SGA_v2.0_scaffold69G23225 Striga asiatica
SHI02287 Sapria himalayana
SMO169G0056 Selaginella moellendorffii
SMO184G0008 Selaginella moellendorffii
SMO202G0065 Selaginella moellendorffii
SMO340G0290 Selaginella moellendorffii
Solyc01g058550.1 Solanum lycopersicum
Solyc06g076360.4 Solanum lycopersicum
Sopen06g032770 Solanum pennellii
Sp5g14980 Schrenkiella parvula
TAR623G1400 Trochodendron aralioides
TAR633G0947 Trochodendron aralioides
TAR636G1806 Trochodendron aralioides
THA.LOC104799432 Tarenaya hassleriana
THA.LOC104810757 Tarenaya hassleriana
Thecc.09G316500 Theobroma cacao
Thhalv10002403m.g Eutrema salsugineum
TPR.G21494 Trifolium pratense
TPR.G23580 Trifolium pratense
TPR.G28610 Trifolium pratense
TPR.G39921 Trifolium pratense
TPR.G40589 Trifolium pratense
TPR.G6840 Trifolium pratense
TWI56G0665 Tripterygium wilfordii
TWI56G1465 Tripterygium wilfordii
TWI75G1391 Tripterygium wilfordii
TWI79G0647 Tripterygium wilfordii
unitig_747.g22046 Utricularia gibba
unitig_747.g22047 Utricularia gibba
vmacro03033 Vaccinium macrocarpon
VMungo1080G0243 Vigna mungo
Zm00001eb012140 Zea mays
Zm00001eb397790 Zea mays

User provided reference genes

Program Settings