Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p37470 Brassica napus
A09p41710 Brassica napus
Aa31LG4G10010 Aethionema arabicum
Aa31LG7G7020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.680 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.2022 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.2025 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.2033 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.81 Anthoceros agrestis
Actinidia14957 Actinidia chinensis
Actinidia14958 Actinidia chinensis
Ah.02g127740 Amaranthus hybridus
Ah.10g035140 Amaranthus hybridus
AL1G36580 Arabidopsis lyrata
AL2G30610 Arabidopsis lyrata
Aqoxy7G02484 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TA5AS1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YRV6S7 Arachis hypogaea
AT1G23010 Arabidopsis thaliana
AT1G71040 Arabidopsis thaliana
ATR0686G217 Amborella trichopoda
Atru.chr1.911 Acer truncatum
Atru.chr11.1539 Acer truncatum
Atru.chr11.396 Acer truncatum
Atru.chr4.801 Acer truncatum
AUR62014200 Chenopodium quinoa
AUR62041235 Chenopodium quinoa
BcaB03g14866 Brassica carinata
BcaB07g32299 Brassica carinata
BcaC05g26213 Brassica carinata
BolC5t30923H Brassica oleracea
BolC6t39573H Brassica oleracea
BraA07t31304Z Brassica rapa
BraA09t39660Z Brassica rapa
C05p22220 Brassica napus
C06p45170 Brassica napus
CAN.G1334.9 Capsicum annuum
CANSAT01G2422 Cannabis sativa
CARHR023390 Cardamine hirsuta
CARHR064330 Cardamine hirsuta
Carub.0001s2251 Capsella rubella
Carub.0002s1785 Capsella rubella
Ca_27464_v3 Cicer arietinum L.
Cc04_g06550 Coffea canephora
Cc11_g08850 Coffea canephora
CDE02G4174 Ceratophyllum demersum
CDE06G0333 Ceratophyllum demersum
CDE06G1074 Ceratophyllum demersum
CDE06G2184 Ceratophyllum demersum
CDE07G1323 Ceratophyllum demersum
Cfa008593 Carpinus fangiana
Cfa008595 Carpinus fangiana
Ciclev10014737m.g Citrus clementina
Ciclev10025245m.g Citrus clementina
CiPaw.05G248400 Carya illinoinensis
CiPaw.05G248500 Carya illinoinensis
CiPaw.06G012600 Carya illinoinensis
ClCG01G007120 Citrullus lanatus
COL.COLO4_20466 Corchorus olitorius
COL.COLO4_20467 Corchorus olitorius
COL.COLO4_20468 Corchorus olitorius
Cpa.g.sc211.3 Carica papaya
Cpa.g.sc211.4 Carica papaya
Cpa.g.sc65.123 Carica papaya
Cre07.g331150 Chlamydomonas reinhardtii
Cre07.g332100 Chlamydomonas reinhardtii
CsaV3_5G017570 Cucumis sativus L.
CSS0000009 Camellia sinensis var. sinensis
CSS0007148 Camellia sinensis var. sinensis
CSS0008481 Camellia sinensis var. sinensis
CSS0013684 Camellia sinensis var. sinensis
CSS0026339 Camellia sinensis var. sinensis
CSS0038717 Camellia sinensis var. sinensis
DCAR_023612 Daucus carota
DCAR_030214 Daucus carota
Dinv05160 Davidia involucrata
Dinv26503 Davidia involucrata
Duzib248G0865 Durio zibethinus
Duzib251G0338 Durio zibethinus
Duzib268G0521 Durio zibethinus
ECA246G0006 Erigeron canadensis
EL10Ac6g14235 Beta vulgaris
Eucgr.B00861 Eucalyptus grandis
Eucgr.B00862 Eucalyptus grandis
Eucgr.B00863 Eucalyptus grandis
Eucgr.B00864 Eucalyptus grandis
Eucgr.G02197 Eucalyptus grandis
Eucgr.L02941 Eucalyptus grandis
Eucgr.L03602 Eucalyptus grandis
FAN07G1313 Fragaria x ananassa
FAN12G2939 Fragaria x ananassa
FAN17G2366 Fragaria x ananassa
FvH4_4g32270 Fragaria vesca
Glyma.10G263800 Glycine max
Glyma.20G126500 Glycine max
Gohir.A03G122700 Gossypium hirsutum
Gohir.D02G145300 Gossypium hirsutum
Gorai.005G162700 Gossypium raimondii
GSVIVG01011773001 Vitis vinifera
GSVIVG01011776001 Vitis vinifera
HanXRQChr15g0488641 Helianthus annuus
Haze_11020 Corylus avellana
Haze_11021 Corylus avellana
Hma1.2p1_0464F.1_g158300 Hydrangea macrophylla
Hma1.2p1_2006F.1_g310860 Hydrangea macrophylla
Hma1.2p1_2006F.1_g310870 Hydrangea macrophylla
Hma1.2p1_2006F.1_g310880 Hydrangea macrophylla
Hma1.2p1_2302F.1_g319290 Hydrangea macrophylla
HPP92_021474 Vanilla planifolia
HPP92_021851 Vanilla planifolia
Hund28920 Selenicereus undatus
Hund28921 Selenicereus undatus
Lalb_Chr02g0145381 Lupinus albus
Lalb_Chr21g0308441 Lupinus albus
Lalb_Chr21g0308461 Lupinus albus
Lj5g0011691 Lotus japonicus
Lj5g0012593 Lotus japonicus
Lj6P748T31 Lonicera japonica
Lsat_1_v5_gn_3_54600 Lactuca sativa
Manes.14G169400 Manihot esculenta
Manes.15G126800 Manihot esculenta
Mapoly0004s0015 Marchantia polymorpha
Mapoly0008s0168 Marchantia polymorpha
Mapoly0008s0169 Marchantia polymorpha
Mapoly0008s0270 Marchantia polymorpha
Mapoly0030s0116 Marchantia polymorpha
Mapoly0054s0017 Marchantia polymorpha
Mapoly0064s0003 Marchantia polymorpha
Mapoly0186s0019 Marchantia polymorpha
Mapoly0186s0020 Marchantia polymorpha
Mapoly0213s0009 Marchantia polymorpha
Mapoly0213s0010 Marchantia polymorpha
Mapoly0217s0007 Marchantia polymorpha
Mapoly0217s0009 Marchantia polymorpha
Mapoly0988s0001 Marchantia polymorpha
MBI16_g05921_MAGBIO Magnolia biondii
MD13G1026500 Malus domestica
MD13G1026600 Malus domestica
MD16G1029700 Malus domestica
Medtr1g107555 Medicago truncatula
MELO3C005201.2 Cucumis melo
Migut.L00984 Erythranthe guttata
MSTRG.7628 Avicennia marina
MSTRG.891 Avicennia marina
Nitab4.5_0004776g0020 Nicotiana tabacum
Nitab4.5_0004776g0110 Nicotiana tabacum
Nn1g01965 Nelumbo nucifera
Nn1g01992 Nelumbo nucifera
Nn1g01993 Nelumbo nucifera
Nn1g01994 Nelumbo nucifera
Nn1g01995 Nelumbo nucifera
Nn1g05234 Nelumbo nucifera
Nn1g05235 Nelumbo nucifera
Nn2g11059 Nelumbo nucifera
Nn3g18197 Nelumbo nucifera
Nn3g18198 Nelumbo nucifera
Nn3g18200 Nelumbo nucifera
Nn3g19283 Nelumbo nucifera
Nn3g19285 Nelumbo nucifera
Nn3g19305 Nelumbo nucifera
Nn3g19307 Nelumbo nucifera
Nn3g19308 Nelumbo nucifera
Nn3g19448 Nelumbo nucifera
Nn4g24113 Nelumbo nucifera
Nn4g24115 Nelumbo nucifera
Nn4g24116 Nelumbo nucifera
Nn4g24117 Nelumbo nucifera
Nn4g24118 Nelumbo nucifera
Nn5g28967 Nelumbo nucifera
Oeu036719.1 Olea europaea
Oeu045878.1 Olea europaea
Os01g0126100 Oryza sativa ssp. japonica
Os01g0126200 Oryza sativa ssp. japonica
Os01g0126900 Oryza sativa ssp. japonica
Os01g0127000 Oryza sativa ssp. japonica
Os01g0127200 Oryza sativa ssp. japonica
Peaxi162Scf00205g00119 Petunia axillaris
PGR119G0930 Punica granatum
PGR119G1292 Punica granatum
PGSC0003DMG400030551 Solanum tuberosum
Phvul.007G038200 Phaseolus vulgaris
Potri.010G114200 Populus trichocarpa
Pp3c20_21960 Physcomitrium patens
Pp3c3_17360 Physcomitrium patens
Prupe.1G323200 Prunus persica
Psat6g220240 Pisum sativum
PSO017G6219 Papaver somniferum
PSO478G3228 Papaver somniferum
QL01p001972 Quercus lobata
QL01p002000 Quercus lobata
QL01p002017 Quercus lobata
RcHm_v2.0_Chr4g0441061 Rosa chinensis
Sabra10G0084200 Salix brachista
SalBow8G4352 Salvia bowleyana
Sc14g0007190 Simmondsia chinensis
Sed0020640 Sechium edule
SEGI_12055 Sequoiadendron giganteum
SEGI_12072 Sequoiadendron giganteum
SEGI_28453 Sequoiadendron giganteum
SGA_v2.0_scaffold38G15066 Striga asiatica
SHI04700 Sapria himalayana
SMO118G0126 Selaginella moellendorffii
Solyc05g008290.4 Solanum lycopersicum
Sopen05g004120 Solanum pennellii
Sp1g20470 Schrenkiella parvula
Sp5g26210 Schrenkiella parvula
TAR622G0259 Trochodendron aralioides
TAR622G0413 Trochodendron aralioides
THA.LOC104823018 Tarenaya hassleriana
Thecc.02G279900 Theobroma cacao
Thhalv10007182m.g Eutrema salsugineum
Thhalv10018329m.g Eutrema salsugineum
TPR.G13860 Trifolium pratense
TWI31G0001 Tripterygium wilfordii
TWI31G0694 Tripterygium wilfordii
unitig_26.g8995 Utricularia gibba
unitig_26.g9001 Utricularia gibba
unitig_26.g9002 Utricularia gibba
unitig_26.g9004 Utricularia gibba
unitig_26.g9005 Utricularia gibba
unitig_749.g14111 Utricularia gibba
vmacro10636 Vaccinium macrocarpon
vmacro10637 Vaccinium macrocarpon
VMungo0720G1513 Vigna mungo
Zm00001eb125630 Zea mays
Zm00001eb125660 Zea mays

User provided reference genes

Program Settings