Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23250 Brassica napus
A03p48520 Brassica napus
Aa31LG10G9130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1172 Anthoceros agrestis
Actinidia05355 Actinidia chinensis
Actinidia11570 Actinidia chinensis
Actinidia12924 Actinidia chinensis
Actinidia36934 Actinidia chinensis
Ah.02g115580 Amaranthus hybridus
Ah.12g058860 Amaranthus hybridus
AL4G21220 Arabidopsis lyrata
AL5G32260 Arabidopsis lyrata
AL7G47860 Arabidopsis lyrata
AL8G23530 Arabidopsis lyrata
Aqoxy2G00837 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4KM924 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L1LL6X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MTX888 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2MXQV Arachis hypogaea
AT3G51800 Arabidopsis thaliana
ATR0681G338 Amborella trichopoda
Atru.chr11.573 Acer truncatum
Atru.chr3.4173 Acer truncatum
Atru.chr8.2276 Acer truncatum
Atru.ctg1436.29 Acer truncatum
AUR62010443 Chenopodium quinoa
AUR62030474 Chenopodium quinoa
BcaB01g00415 Brassica carinata
BcaB01g00475 Brassica carinata
BcaC06g33008 Brassica carinata
BcaC06g33351 Brassica carinata
BcaC09g50104 Brassica carinata
BcaNung00370 Brassica carinata
BolC1t02823H Brassica oleracea
BolC7t45176H Brassica oleracea
BraA01t02237Z Brassica rapa
BraA03t13957Z Brassica rapa
BraA09t39956Z Brassica rapa
C01p28890 Brassica napus
C07p46610 Brassica napus
CAN.G1095.5 Capsicum annuum
CAN.G583.7 Capsicum annuum
CANSAT35G1667 Cannabis sativa
CARHR161430 Cardamine hirsuta
Carub.0005s1815 Capsella rubella
Ca_04021_v3 Cicer arietinum L.
Ca_07662_v3 Cicer arietinum L.
CBR_g24341 Chara braunii
Cc01_g14450 Coffea canephora
CDE06G0106 Ceratophyllum demersum
CDE12G0536 Ceratophyllum demersum
Cfa011724 Carpinus fangiana
Cfa017177 Carpinus fangiana
Cfa022646 Carpinus fangiana
Cfa024980 Carpinus fangiana
Ciclev10011909m.g Citrus clementina
CiPaw.09G211500 Carya illinoinensis
CiPaw.10G158000 Carya illinoinensis
ClCG04G006900 Citrullus lanatus
ClCG10G022300 Citrullus lanatus
COL.COLO4_03383 Corchorus olitorius
Cpa.g.sc120.60 Carica papaya
Cre13.g604650 Chlamydomonas reinhardtii
CsaV3_3G033580 Cucumis sativus L.
CsaV3_4G026370 Cucumis sativus L.
CsaV3_4G026380 Cucumis sativus L.
CSS0004847 Camellia sinensis var. sinensis
CSS0006154 Camellia sinensis var. sinensis
CSS0011709 Camellia sinensis var. sinensis
CSS0017836 Camellia sinensis var. sinensis
CSS0019491 Camellia sinensis var. sinensis
CSS0020092 Camellia sinensis var. sinensis
CSS0021176 Camellia sinensis var. sinensis
CSS0029522 Camellia sinensis var. sinensis
CSS0037459 Camellia sinensis var. sinensis
CSS0038480 Camellia sinensis var. sinensis
CSS0042925 Camellia sinensis var. sinensis
CSS0049346 Camellia sinensis var. sinensis
DCAR_015391 Daucus carota
DCAR_018684 Daucus carota
DCAR_028864 Daucus carota
Dinv09637 Davidia involucrata
Dinv16900 Davidia involucrata
Duzib093G1068 Durio zibethinus
Duzib106G1809 Durio zibethinus
Duzib128G0937 Durio zibethinus
ECA236G1375 Erigeron canadensis
EL10Ac5g12534 Beta vulgaris
Eucgr.K02971 Eucalyptus grandis
Eucgr.L01138 Eucalyptus grandis
Eucgr.L01140 Eucalyptus grandis
FAN02G0092 Fragaria x ananassa
FAN05G1407 Fragaria x ananassa
FAN09G4535 Fragaria x ananassa
FAN14G0463 Fragaria x ananassa
FvH4_6g11120 Fragaria vesca
Glyma.01G119400 Glycine max
Glyma.03G055500 Glycine max
Glyma.07G152700 Glycine max
Glyma.16G098600 Glycine max
Glyma.18G203733 Glycine max
Glyma.18G203800 Glycine max
Gohir.A09G166400 Gossypium hirsutum
Gohir.D01G216210 Gossypium hirsutum
Gohir.D01G216400 Gossypium hirsutum
Gohir.D09G162000 Gossypium hirsutum
Gorai.002G262700 Gossypium raimondii
Gorai.006G183700 Gossypium raimondii
GSVIVG01003934001 Vitis vinifera
GSVIVG01024707001 Vitis vinifera
HanXRQChr06g0182241 Helianthus annuus
HanXRQChr12g0383151 Helianthus annuus
Haze_12926 Corylus avellana
Haze_21028 Corylus avellana
Haze_21035 Corylus avellana
Haze_26282 Corylus avellana
Hma1.2p1_0362F.1_g136510 Hydrangea macrophylla
Hma1.2p1_0479F.1_g161450 Hydrangea macrophylla
Hma1.2p1_1991F.1_g310220 Hydrangea macrophylla
HPP92_018102 Vanilla planifolia
Hund10981 Selenicereus undatus
Hund14884 Selenicereus undatus
Lalb_Chr01g0023171 Lupinus albus
Lalb_Chr03g0043351 Lupinus albus
Lalb_Chr03g0043361 Lupinus albus
Lalb_Chr19g0124391 Lupinus albus
Lalb_Chr19g0124401 Lupinus albus
Lj2C71G10 Lonicera japonica
Lj3C949G7 Lonicera japonica
Lj3g0005923 Lotus japonicus
Lj3g0018440 Lotus japonicus
Lsat_1_v5_gn_5_92080 Lactuca sativa
Lsat_1_v5_gn_8_101001 Lactuca sativa
Lsat_1_v5_gn_9_35001 Lactuca sativa
Manes.09G106700 Manihot esculenta
Mapoly0151s0030 Marchantia polymorpha
MBI15_g33260_MAGBIO Magnolia biondii
MD00G1062200 Malus domestica
MD12G1172200 Malus domestica
Medtr2g078290 Medicago truncatula
Medtr3g456050 Medicago truncatula
Medtr7g069390 Medicago truncatula
MELO3C009148.2 Cucumis melo
MELO3C026003.2 Cucumis melo
Migut.J00135 Erythranthe guttata
Migut.L02031 Erythranthe guttata
MSTRG.18993 Avicennia marina
MSTRG.5563 Avicennia marina
Nitab4.5_0000967g0130 Nicotiana tabacum
Nitab4.5_0001048g0010 Nicotiana tabacum
Nitab4.5_0001806g0010 Nicotiana tabacum
Nitab4.5_0008458g0040 Nicotiana tabacum
Nitab4.5_0011006g0020 Nicotiana tabacum
Nn2g10902 Nelumbo nucifera
Nn2g13177 Nelumbo nucifera
Oeu023270.1 Olea europaea
Oeu034838.1 Olea europaea
Oeu038750.2 Olea europaea
Oeu042664.1 Olea europaea
Oeu063394.1 Olea europaea
Os05g0350500 Oryza sativa ssp. japonica
Peaxi162Scf00053g00199 Petunia axillaris
Peaxi162Scf00540g00127 Petunia axillaris
PGR004G1298 Punica granatum
PGR004G1748 Punica granatum
PGSC0003DMG400020542 Solanum tuberosum
PGSC0003DMG400030365 Solanum tuberosum
Phvul.008G095800 Phaseolus vulgaris
Phvul.008G095900 Phaseolus vulgaris
Potri.006G102200 Populus trichocarpa
Potri.016G119700 Populus trichocarpa
Pp3c11_15930 Physcomitrium patens
Pp3c2_24640 Physcomitrium patens
Pp3c7_14570 Physcomitrium patens
PRCOL_00001122 Prasinoderma coloniale
Prupe.6G280500 Prunus persica
Psat3g051480 Pisum sativum
Psat3g126040 Pisum sativum
Psat5g240720 Pisum sativum
PSO339G0128 Papaver somniferum
PSO339G5715 Papaver somniferum
PSO384G0757 Papaver somniferum
PSO801G0079 Papaver somniferum
QL07p035029 Quercus lobata
RcHm_v2.0_Chr3g0462561 Rosa chinensis
Rhsim05G0217500 Rhododendron simsii
Sabra06G0078500 Salix brachista
Sabra16G0115600 Salix brachista
SalBow4G0748 Salvia bowleyana
SalBow5G1849 Salvia bowleyana
Sc07g0006730 Simmondsia chinensis
Sed0021817 Sechium edule
Sed0026995 Sechium edule
SEGI_37203 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31204 Striga asiatica
SGA_v2.0_scaffold75G25030 Striga asiatica
SMO358G0659 Selaginella moellendorffii
Solyc06g007200.4 Solanum lycopersicum
Solyc06g082090.4 Solanum lycopersicum
Sopen06g002180 Solanum pennellii
Sopen06g033480 Solanum pennellii
Sp5g10470 Schrenkiella parvula
TAR623G1243 Trochodendron aralioides
TAR633G0702 Trochodendron aralioides
TAR636G2360 Trochodendron aralioides
THA.LOC104805968 Tarenaya hassleriana
THA.LOC104806611 Tarenaya hassleriana
THA.LOC104823376 Tarenaya hassleriana
Thecc.05G012400 Theobroma cacao
Thhalv10010435m.g Eutrema salsugineum
TPR.G33095 Trifolium pratense
TPR.G35448 Trifolium pratense
TPR.G9215 Trifolium pratense
TWI53G2107 Tripterygium wilfordii
TWI74G1204 Tripterygium wilfordii
unitig_578.g15902 Utricularia gibba
unitig_8.g4458 Utricularia gibba
vmacro20298 Vaccinium macrocarpon
VMungo0331G2054 Vigna mungo
VMungo0540G1094 Vigna mungo
VMungo0730G0001 Vigna mungo
VMungo1383G1106 Vigna mungo
VMungo1383G1990 Vigna mungo
Zm00001eb075750 Zea mays
Zm00001eb077940 Zea mays
Zm00001eb286210 Zea mays
Zm00001eb351100 Zea mays

User provided reference genes

Program Settings