Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35170 Brassica napus
A05p40910 Brassica napus
A06p39050 Brassica napus
Aa31LG5G17850 Aethionema arabicum
Actinidia11454 Actinidia chinensis
Actinidia21254 Actinidia chinensis
Actinidia21255 Actinidia chinensis
Actinidia23384 Actinidia chinensis
Actinidia28994 Actinidia chinensis
Actinidia35843 Actinidia chinensis
Ah.04g149350 Amaranthus hybridus
Ah.13g077980 Amaranthus hybridus
AL3G18580 Arabidopsis lyrata
AL625U10010 Arabidopsis lyrata
Aqoxy2G03937 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea
AT5G43490 Arabidopsis thaliana
AT5G48610 Arabidopsis thaliana
ATR0561G140 Amborella trichopoda
Atru.chr4.1590 Acer truncatum
Atru.chr6.1447 Acer truncatum
AUR62018560 Chenopodium quinoa
AUR62020859 Chenopodium quinoa
BcaB04g21298 Brassica carinata
BcaC05g29734 Brassica carinata
BcaC05g29857 Brassica carinata
BcaC06g30775 Brassica carinata
BNapus_Darmor_BZH_scaffold_109p00150 Brassica napus
BolC1t05561H Brassica oleracea
BolC3t16546H Brassica oleracea
BolC7t44449H Brassica oleracea
BraA01t04389Z Brassica rapa
BraA03t12696Z Brassica rapa
BraA05t22820Z Brassica rapa
BraA06t26818Z Brassica rapa
C03p42770 Brassica napus
C05p60010 Brassica napus
C07p39290 Brassica napus
CAN.G136.8 Capsicum annuum
CAN.G765.36 Capsicum annuum
CAN.G767.12 Capsicum annuum
CANSAT78G1052 Cannabis sativa
CARHR081930 Cardamine hirsuta
CARHR291990 Cardamine hirsuta
CARHR292000 Cardamine hirsuta
Carub.0003s0681 Capsella rubella
Carub.0008s0826 Capsella rubella
Ca_17981_v3 Cicer arietinum L.
Cc01_g16520 Coffea canephora
Cc03_g08440 Coffea canephora
CDE02G0447 Ceratophyllum demersum
CDE05G0369 Ceratophyllum demersum
CDE05G0723 Ceratophyllum demersum
CDE05G1204 Ceratophyllum demersum
Cfa014958 Carpinus fangiana
Ciclev10005071m.g Citrus clementina
CiPaw.01G117300 Carya illinoinensis
CiPaw.02G064700 Carya illinoinensis
CiPaw.14G040000 Carya illinoinensis
ClCG05G003130 Citrullus lanatus
ClCG06G007970 Citrullus lanatus
COL.COLO4_20221 Corchorus olitorius
COL.COLO4_20222 Corchorus olitorius
Cpa.g.sc157.52 Carica papaya
CsaV3_2G011760 Cucumis sativus L.
CsaV3_3G010750 Cucumis sativus L.
CSS0036198 Camellia sinensis var. sinensis
CSS0049755 Camellia sinensis var. sinensis
DCAR_004743 Daucus carota
DCAR_012677 Daucus carota
DCAR_026643 Daucus carota
Dinv14526 Davidia involucrata
Dinv27203 Davidia involucrata
Dinv38178 Davidia involucrata
Duzib151G1197 Durio zibethinus
Duzib212G0885 Durio zibethinus
Duzib268G0331 Durio zibethinus
ECA248G1735 Erigeron canadensis
EL10Ac3g07458 Beta vulgaris
Eucgr.H00027 Eucalyptus grandis
FAN07G2221 Fragaria x ananassa
FAN12G1114 Fragaria x ananassa
FAN17G0226 Fragaria x ananassa
FAN22G0425 Fragaria x ananassa
FvH4_4g13340 Fragaria vesca
Glyma.05G152400 Glycine max
Glyma.08G110100 Glycine max
Glyma.11G255200 Glycine max
Glyma.15G189650 Glycine max
Glyma.18G001900 Glycine max
Gohir.A02G019500 Gossypium hirsutum
Gohir.A09G206200 Gossypium hirsutum
Gohir.A10G127900 Gossypium hirsutum
Gohir.D02G022800 Gossypium hirsutum
Gohir.D09G199800 Gossypium hirsutum
Gohir.D10G138100 Gossypium hirsutum
Gorai.005G028200 Gossypium raimondii
Gorai.006G223500 Gossypium raimondii
Gorai.011G153200 Gossypium raimondii
GSVIVG01004954001 Vitis vinifera
GSVIVG01021020001 Vitis vinifera
HanXRQChr01g0022171 Helianthus annuus
HanXRQChr11g0344321 Helianthus annuus
Haze_03354 Corylus avellana
Haze_11649 Corylus avellana
Hma1.2p1_0349F.1_g132190 Hydrangea macrophylla
HPP92_006969 Vanilla planifolia
HPP92_025250 Vanilla planifolia
Hund19006 Selenicereus undatus
Lalb_Chr07g0186821 Lupinus albus
Lalb_Chr12g0205611 Lupinus albus
Lalb_Chr13g0294851 Lupinus albus
Lalb_Chr23g0278361 Lupinus albus
Lalb_Chr23g0278371 Lupinus albus
Lj1A90T42 Lonicera japonica
Lj2C1122G5 Lonicera japonica
Lj4g0000581 Lotus japonicus
Lsat_1_v5_gn_1_70641 Lactuca sativa
Manes.03G144600 Manihot esculenta
Manes.12G049400 Manihot esculenta
Manes.13G051200 Manihot esculenta
Manes.15G056400 Manihot esculenta
MBI07_g16779_MAGBIO Magnolia biondii
MBI07_g27661_MAGBIO Magnolia biondii
MBI07_g42750_MAGBIO Magnolia biondii
MD04G1017000 Malus domestica
MD04G1017100 Malus domestica
MD13G1282000 Malus domestica
Medtr8g081570 Medicago truncatula
MELO3C006294.2 Cucumis melo
MELO3C020427.2 Cucumis melo
Migut.D02515 Erythranthe guttata
Migut.G00757 Erythranthe guttata
MSTRG.4243 Avicennia marina
MSTRG.9800 Avicennia marina
Nitab4.5_0000676g0030 Nicotiana tabacum
Nitab4.5_0000850g0180 Nicotiana tabacum
Nitab4.5_0002260g0050 Nicotiana tabacum
Nitab4.5_0006920g0010 Nicotiana tabacum
Nitab4.5_0006920g0030 Nicotiana tabacum
Nn3g20072 Nelumbo nucifera
Nn3g20075 Nelumbo nucifera
Oeu030588.1 Olea europaea
Oeu034324.1 Olea europaea
Oeu043441.1 Olea europaea
Oeu049048.2 Olea europaea
Oeu056423.1 Olea europaea
Oeu057857.3 Olea europaea
Os03g0847800 Oryza sativa ssp. japonica
Os08g0525900 Oryza sativa ssp. japonica
Peaxi162Scf00423g00411 Petunia axillaris
Peaxi162Scf00664g00001 Petunia axillaris
Peaxi162Scf00664g00009 Petunia axillaris
PGR083G2864 Punica granatum
PGSC0003DMG400004658 Solanum tuberosum
PGSC0003DMG400015747 Solanum tuberosum
Phvul.003G050700 Phaseolus vulgaris
Phvul.003G050800 Phaseolus vulgaris
Potri.001G319500 Populus trichocarpa
Potri.001G319600 Populus trichocarpa
Potri.017G058500 Populus trichocarpa
Potri.017G058600 Populus trichocarpa
Potri.017G058701 Populus trichocarpa
Potri.017G058800 Populus trichocarpa
Prupe.1G164200 Prunus persica
Prupe.8G196300 Prunus persica
Psat5g100760 Pisum sativum
Psat7g075040 Pisum sativum
PSO017G1724 Papaver somniferum
PSO063G2363 Papaver somniferum
QL06p026140 Quercus lobata
RcHm_v2.0_Chr4g0413691 Rosa chinensis
Rhsim02G0061600 Rhododendron simsii
Rhsim09G0059700 Rhododendron simsii
Rhsim13G0050000 Rhododendron simsii
Sabra16G0202200 Salix brachista
Sabra16G0202300 Salix brachista
Sabra16G0202400 Salix brachista
Sabra17G0052100 Salix brachista
Sabra17G0052200 Salix brachista
SalBow3G0925 Salvia bowleyana
SalBow6G0319 Salvia bowleyana
SalBow6G1280 Salvia bowleyana
SalBow8G4246 Salvia bowleyana
SalBow8G5155 Salvia bowleyana
Sc05g0001900 Simmondsia chinensis
Sc13g0000380 Simmondsia chinensis
Sed0001070 Sechium edule
Sed0005118 Sechium edule
Sed0025519 Sechium edule
SEGI_06778 Sequoiadendron giganteum
SEGI_14091 Sequoiadendron giganteum
SGA_v2.0_scaffold156G37278 Striga asiatica
SGA_v2.0_scaffold270G46323 Striga asiatica
SHI28768 Sapria himalayana
SHI28770 Sapria himalayana
Solyc05g053770.4 Solanum lycopersicum
Solyc12g098463.1 Solanum lycopersicum
Solyc12g098467.1 Solanum lycopersicum
Sopen05g032240 Solanum pennellii
Sopen12g033250 Solanum pennellii
Sp2g18960 Schrenkiella parvula
Sp3g06210 Schrenkiella parvula
Sp3g06230 Schrenkiella parvula
TAR362G1056 Trochodendron aralioides
TAR365G0314 Trochodendron aralioides
TAR633G2732 Trochodendron aralioides
TAR636G0249 Trochodendron aralioides
THA.LOC104808800 Tarenaya hassleriana
THA.LOC104822483 Tarenaya hassleriana
Thecc.04G195700 Theobroma cacao
Thhalv10004154m.g Eutrema salsugineum
Thhalv10020618m.g Eutrema salsugineum
TPR.G11807 Trifolium pratense
TWI18G0251 Tripterygium wilfordii
TWI36G0576 Tripterygium wilfordii
TWI36G1114 Tripterygium wilfordii
TWI75G0963 Tripterygium wilfordii
unitig_22.g6828 Utricularia gibba
unitig_8.g3407 Utricularia gibba
vmacro02792 Vaccinium macrocarpon
VMungo0251G2529 Vigna mungo
VMungo0251G3135 Vigna mungo
Zm00001eb036180 Zea mays
Zm00001eb064410 Zea mays
Zm00001eb210840 Zea mays

User provided reference genes

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