Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p50560 Brassica napus
A10p01730 Brassica napus
Aa31LG1G9430 Aethionema arabicum
Aa31LG6G370 Aethionema arabicum
Actinidia02201 Actinidia chinensis
Actinidia14951 Actinidia chinensis
Actinidia15251 Actinidia chinensis
Ah.02g111230 Amaranthus hybridus
Ah.12g053910 Amaranthus hybridus
AL1G12560 Arabidopsis lyrata
AL1G15240 Arabidopsis lyrata
Aqoxy2G03432 Aquilegia oxysepala
Aqoxy7G02099 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0WKU4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5BMW9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KVL3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E9F7LA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5CKXS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MM1MHA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U6JNIR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8MWYL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZDN5TQ Arachis hypogaea
AT1G03100 Arabidopsis thaliana
AT4G17616 Arabidopsis thaliana
ATR0580G357 Amborella trichopoda
ATR0665G032 Amborella trichopoda
ATR0665G053 Amborella trichopoda
Atru.chr1.844 Acer truncatum
Atru.chr9.1169 Acer truncatum
Atru.chr9.1170 Acer truncatum
Atru.chr9.1176 Acer truncatum
AUR62007185 Chenopodium quinoa
AUR62018818 Chenopodium quinoa
AUR62028590 Chenopodium quinoa
AUR62032317 Chenopodium quinoa
BcaC05g24558 Brassica carinata
BcaC05g24642 Brassica carinata
BcaC06g33555 Brassica carinata
BcaNung03453 Brassica carinata
BolC5t28950H Brassica oleracea
BolC7t45396H Brassica oleracea
BraA03t14146Z Brassica rapa
BraA10t42448Z Brassica rapa
C05p01710 Brassica napus
C07p48880 Brassica napus
CAN.G458.18 Capsicum annuum
CAN.G564.17 Capsicum annuum
CANSAT11G2314 Cannabis sativa
CANSAT11G2662 Cannabis sativa
CARHR002450 Cardamine hirsuta
CARHR224340 Cardamine hirsuta
Carub.0001s0224 Capsella rubella
Carub.0007s2376 Capsella rubella
Ca_18833_v3 Cicer arietinum L.
Ca_22023_v3 Cicer arietinum L.
Ca_30092_v3 Cicer arietinum L.
Cc08_g11180 Coffea canephora
Cc10_g07890 Coffea canephora
CDE03G0495 Ceratophyllum demersum
CDE06G1870 Ceratophyllum demersum
CDE08G0616 Ceratophyllum demersum
Cfa006176 Carpinus fangiana
Ciclev10011185m.g Citrus clementina
Ciclev10018932m.g Citrus clementina
CiPaw.12G056100 Carya illinoinensis
CiPaw.13G149000 Carya illinoinensis
ClCG09G007270 Citrullus lanatus
ClCG09G012540 Citrullus lanatus
COL.COLO4_11874 Corchorus olitorius
COL.COLO4_33709 Corchorus olitorius
Cpa.g.c46758 Carica papaya
Cpa.g.sc1.338 Carica papaya
Cpa.g.sc19.20 Carica papaya
CsaV3_3G049690 Cucumis sativus L.
CsaV3_7G027750 Cucumis sativus L.
CSS0003062 Camellia sinensis var. sinensis
CSS0008749 Camellia sinensis var. sinensis
CSS0011247 Camellia sinensis var. sinensis
DCAR_010235 Daucus carota
DCAR_012494 Daucus carota
Dinv25144 Davidia involucrata
Dinv25147 Davidia involucrata
Dinv32903 Davidia involucrata
Duzib138G0140 Durio zibethinus
Duzib264G0873 Durio zibethinus
ECA240G2633 Erigeron canadensis
ECA240G2903 Erigeron canadensis
EL10Ac5g12245 Beta vulgaris
Eucgr.D02137 Eucalyptus grandis
Eucgr.G00655 Eucalyptus grandis
FAN04G1755 Fragaria x ananassa
FAN04G3250 Fragaria x ananassa
FAN08G0752 Fragaria x ananassa
FAN08G2619 Fragaria x ananassa
FAN13G3235 Fragaria x ananassa
FAN18G1169 Fragaria x ananassa
FAN18G3943 Fragaria x ananassa
FvH4_5g20640 Fragaria vesca
FvH4_5g32870 Fragaria vesca
Glyma.03G156301 Glycine max
Glyma.05G066900 Glycine max
Glyma.17G149100 Glycine max
Glyma.18G229500 Glycine max
Glyma.19G158600 Glycine max
Gohir.A07G063400 Gossypium hirsutum
Gohir.A08G045175 Gossypium hirsutum
Gohir.D07G068100 Gossypium hirsutum
Gohir.D08G055300 Gossypium hirsutum
Gorai.001G071600 Gossypium raimondii
Gorai.004G055800 Gossypium raimondii
GSVIVG01001186001 Vitis vinifera
GSVIVG01002606001 Vitis vinifera
HanXRQChr03g0091541 Helianthus annuus
HanXRQChr04g0097841 Helianthus annuus
Haze_04672 Corylus avellana
Haze_08356 Corylus avellana
Hma1.2p1_0840F.1_g226740 Hydrangea macrophylla
Hma1.2p1_2748F.1_g327800 Hydrangea macrophylla
HPP92_014880 Vanilla planifolia
HPP92_016674 Vanilla planifolia
Hund02838 Selenicereus undatus
Lalb_Chr02g0155041 Lupinus albus
Lalb_Chr05g0220871 Lupinus albus
Lalb_Chr16g0386391 Lupinus albus
Lj1g0024371 Lotus japonicus
Lj4g0020525 Lotus japonicus
Lj7P106T16 Lonicera japonica
Lj9P730T47 Lonicera japonica
Lsat_1_v5_gn_3_116821 Lactuca sativa
Lsat_1_v5_gn_7_58800 Lactuca sativa
Manes.02G227100 Manihot esculenta
Manes.14G126400 Manihot esculenta
MBI11_g32996_MAGBIO Magnolia biondii
MD11G1281500 Malus domestica
MD14G1082200 Malus domestica
MD14G1090100 Malus domestica
Medtr4g081540 Medicago truncatula
Medtr4g099200 Medicago truncatula
Medtr8g062650 Medicago truncatula
MELO3C015791.2 Cucumis melo
MELO3C018199.2 Cucumis melo
Migut.E01542 Erythranthe guttata
Migut.F01846 Erythranthe guttata
MSTRG.14033 Avicennia marina
MSTRG.8194 Avicennia marina
Nitab4.5_0000175g0190 Nicotiana tabacum
Nitab4.5_0000433g0030 Nicotiana tabacum
Nitab4.5_0001000g0120 Nicotiana tabacum
Nitab4.5_0001822g0080 Nicotiana tabacum
Nitab4.5_0001822g0100 Nicotiana tabacum
Nitab4.5_0001822g0110 Nicotiana tabacum
Nn1g00737 Nelumbo nucifera
Nn1g08901 Nelumbo nucifera
Oeu028560.1 Olea europaea
Oeu037799.1 Olea europaea
Os07g0495300 Oryza sativa ssp. japonica
Os10g0422566 Oryza sativa ssp. japonica
Peaxi162Scf00025g00002 Petunia axillaris
Peaxi162Scf00226g00318 Petunia axillaris
PGR031G1072 Punica granatum
PGR031G2575 Punica granatum
PGSC0003DMG400029443 Solanum tuberosum
PGSC0003DMG400031153 Solanum tuberosum
Phvul.001G153700 Phaseolus vulgaris
Phvul.011G179900 Phaseolus vulgaris
Potri.003G084400 Populus trichocarpa
Potri.005G212400 Populus trichocarpa
Prupe.2G056400 Prunus persica
Prupe.7G036400 Prunus persica
Prupe.8G237400 Prunus persica
Psat4g074480 Pisum sativum
Psat7g160440 Pisum sativum
PSO541G0342 Papaver somniferum
PSO675G2288 Papaver somniferum
QL08p008350 Quercus lobata
QL09p039064 Quercus lobata
RcHm_v2.0_Chr7g0206021 Rosa chinensis
RcHm_v2.0_Chr7g0206121 Rosa chinensis
RcHm_v2.0_Chr7g0206131 Rosa chinensis
RcHm_v2.0_Chr7g0230741 Rosa chinensis
RcHm_v2.0_Chr7g0230851 Rosa chinensis
Rhsim03G0030000 Rhododendron simsii
Rhsim03G0030600 Rhododendron simsii
Rhsim09G0099900 Rhododendron simsii
Sabra03G0054900 Salix brachista
Sabra05G0162300 Salix brachista
SalBow1G5264 Salvia bowleyana
Sc12g0005140 Simmondsia chinensis
Sc24g0003270 Simmondsia chinensis
Sed0005018 Sechium edule
Sed0019417 Sechium edule
Sed0019599 Sechium edule
SEGI_24431 Sequoiadendron giganteum
SEGI_26685 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38670 Striga asiatica
SHI14303 Sapria himalayana
SHI14304 Sapria himalayana
SHI14305 Sapria himalayana
SHI16911 Sapria himalayana
Solyc04g008410.3 Solanum lycopersicum
Solyc04g072150.3 Solanum lycopersicum
Sopen04g003560 Solanum pennellii
Sopen04g028320 Solanum pennellii
Sp1g02100 Schrenkiella parvula
Sp7g16530 Schrenkiella parvula
TAR636G0001 Trochodendron aralioides
TAR636G2139 Trochodendron aralioides
THA.LOC104798350 Tarenaya hassleriana
THA.LOC104801246 Tarenaya hassleriana
THA.LOC104825991 Tarenaya hassleriana
Thecc.01G159100 Theobroma cacao
Thecc.01G274100 Theobroma cacao
Thhalv10006842m.g Eutrema salsugineum
Thhalv10024595m.g Eutrema salsugineum
TPR.G25764 Trifolium pratense
TPR.G27122 Trifolium pratense
TPR.G40380 Trifolium pratense
TWI18G1240 Tripterygium wilfordii
TWI34G1562 Tripterygium wilfordii
unitig_37.g12085 Utricularia gibba
unitig_52.g17059 Utricularia gibba
vmacro00390 Vaccinium macrocarpon
vmacro10630 Vaccinium macrocarpon
VMungo1127G0894 Vigna mungo
VMungo1383G1235 Vigna mungo
Zm00001eb222930 Zea mays
Zm00001eb432440 Zea mays

User provided reference genes

Program Settings