Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07910 Brassica napus
A03p59690 Brassica napus
Aa31LG2G20290 Aethionema arabicum
Actinidia02959 Actinidia chinensis
Actinidia02960 Actinidia chinensis
Actinidia02961 Actinidia chinensis
Actinidia02963 Actinidia chinensis
Actinidia04141 Actinidia chinensis
Actinidia07721 Actinidia chinensis
Actinidia26625 Actinidia chinensis
Ah.09g229890 Amaranthus hybridus
Ah.14g083800 Amaranthus hybridus
AL7G21920 Arabidopsis lyrata
Aqoxy7G03070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4MY83E Arachis hypogaea
AT4G30230 Arabidopsis thaliana
ATR0580G303 Amborella trichopoda
Atru.chr12.659 Acer truncatum
Atru.chr12.686 Acer truncatum
Atru.chr7.633 Acer truncatum
AUR62021300 Chenopodium quinoa
BcaC09g51805 Brassica carinata
BcaNung00532 Brassica carinata
BcaNung03008 Brassica carinata
BolC1t00873H Brassica oleracea
BolC7t46232H Brassica oleracea
BraA01t00737Z Brassica rapa
BraA03t15021Z Brassica rapa
C01p08830 Brassica napus
C07p57710 Brassica napus
CANSAT11G1249 Cannabis sativa
CARHR238140 Cardamine hirsuta
Carub.0007s1038 Capsella rubella
Ca_10586_v3 Cicer arietinum L.
Ca_21174_v3 Cicer arietinum L.
Ca_21223_v3 Cicer arietinum L.
Cc02_g11380 Coffea canephora
Cfa001601 Carpinus fangiana
Cfa013505 Carpinus fangiana
Ciclev10010534m.g Citrus clementina
Ciclev10010819m.g Citrus clementina
Ciclev10033392m.g Citrus clementina
CiPaw.01G275700 Carya illinoinensis
CiPaw.02G176000 Carya illinoinensis
CiPaw.05G049400 Carya illinoinensis
CiPaw.07G071600 Carya illinoinensis
CiPaw.07G192300 Carya illinoinensis
CiPaw.08G036400 Carya illinoinensis
ClCG06G013330 Citrullus lanatus
ClCG09G020480 Citrullus lanatus
COL.COLO4_23725 Corchorus olitorius
COL.COLO4_35897 Corchorus olitorius
Cpa.g.sc53.28 Carica papaya
Cpa.g.sc95.49 Carica papaya
CsaV3_1G031590 Cucumis sativus L.
CsaV3_5G025940 Cucumis sativus L.
DCAR_014702 Daucus carota
DCAR_015284 Daucus carota
DCAR_017969 Daucus carota
DCAR_019134 Daucus carota
DCAR_019362 Daucus carota
DCAR_031845 Daucus carota
Dinv11798 Davidia involucrata
Dinv11799 Davidia involucrata
Dinv31353 Davidia involucrata
Dinv31354 Davidia involucrata
Dinv41250 Davidia involucrata
Dinv42724 Davidia involucrata
Dinv43377 Davidia involucrata
Duzib106G1942 Durio zibethinus
Duzib114G0319 Durio zibethinus
Duzib150G1089 Durio zibethinus
Duzib168G2116 Durio zibethinus
Duzib170G0355 Durio zibethinus
ECA233G4042 Erigeron canadensis
ECA234G3857 Erigeron canadensis
ECA238G4329 Erigeron canadensis
ECA240G3460 Erigeron canadensis
EL10Ac8g18285 Beta vulgaris
Eucgr.C00156 Eucalyptus grandis
Eucgr.C02308 Eucalyptus grandis
Eucgr.G02809 Eucalyptus grandis
Eucgr.J01114 Eucalyptus grandis
Eucgr.J01115 Eucalyptus grandis
Eucgr.J01118 Eucalyptus grandis
Eucgr.J01119 Eucalyptus grandis
Eucgr.J01120 Eucalyptus grandis
FAN01G0050 Fragaria x ananassa
FAN01G2565 Fragaria x ananassa
FAN03G1700 Fragaria x ananassa
FAN06G0496 Fragaria x ananassa
FAN06G2932 Fragaria x ananassa
FAN07G1960 Fragaria x ananassa
FAN10G0626 Fragaria x ananassa
FAN10G4329 Fragaria x ananassa
FAN12G0399 Fragaria x ananassa
FAN17G2997 Fragaria x ananassa
FAN22G0428 Fragaria x ananassa
FvH4_4g08220 Fragaria vesca
FvH4_7g20060 Fragaria vesca
FvH4_7g20070 Fragaria vesca
Glyma.10G213000 Glycine max
Glyma.17G063300 Glycine max
Glyma.20G083700 Glycine max
Glyma.20G178000 Glycine max
Gohir.A06G178400 Gossypium hirsutum
Gohir.A08G023400 Gossypium hirsutum
Gohir.A08G084400 Gossypium hirsutum
Gohir.D06G174600 Gossypium hirsutum
Gohir.D08G033900 Gossypium hirsutum
Gohir.D08G094000 Gossypium hirsutum
Gorai.004G031500 Gossypium raimondii
Gorai.004G099800 Gossypium raimondii
Gorai.010G204300 Gossypium raimondii
HanXRQChr08g0219501 Helianthus annuus
HanXRQChr09g0244991 Helianthus annuus
Haze_16927 Corylus avellana
Haze_22098 Corylus avellana
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla
Lalb_Chr02g0141941 Lupinus albus
Lalb_Chr03g0036011 Lupinus albus
Lalb_Chr07g0180461 Lupinus albus
Lalb_Chr12g0199391 Lupinus albus
Lalb_Chr19g0129541 Lupinus albus
Lalb_Chr19g0129551 Lupinus albus
Lj1C921T2 Lonicera japonica
Lj1C921T3 Lonicera japonica
Lj1C921T4 Lonicera japonica
Lj1P920T18 Lonicera japonica
Lj4g0004544 Lotus japonicus
Lj5g0002057 Lotus japonicus
Lj9A26T13 Lonicera japonica
Lj9C24T7 Lonicera japonica
Lj9P685T21 Lonicera japonica
Lsat_1_v5_gn_2_113980 Lactuca sativa
Lsat_1_v5_gn_2_114020 Lactuca sativa
Lsat_1_v5_gn_5_84881 Lactuca sativa
Lsat_1_v5_gn_7_54521 Lactuca sativa
Lsat_1_v5_gn_8_19121 Lactuca sativa
Lsat_1_v5_gn_9_67300 Lactuca sativa
Manes.07G102900 Manihot esculenta
Manes.10G043500 Manihot esculenta
Manes.10G043600 Manihot esculenta
Manes.14G153300 Manihot esculenta
Manes.14G153400 Manihot esculenta
Manes.14G153500 Manihot esculenta
MBI16_g41356_MAGBIO Magnolia biondii
MD13G1253900 Malus domestica
MD16G1257900 Malus domestica
Medtr1g095730 Medicago truncatula
Medtr4g128160 Medicago truncatula
MELO3C017464.2 Cucumis melo
MELO3C025508.2 Cucumis melo
Migut.F01762 Erythranthe guttata
Migut.F01988 Erythranthe guttata
Migut.J01478 Erythranthe guttata
Migut.K00242 Erythranthe guttata
MSTRG.6214 Avicennia marina
Nitab4.5_0000534g0060 Nicotiana tabacum
Nn2g12774 Nelumbo nucifera
Oeu004196.1 Olea europaea
Oeu025224.1 Olea europaea
Oeu041159.1 Olea europaea
Oeu042166.1 Olea europaea
Oeu063752.1 Olea europaea
PGR044G1573 Punica granatum
PGR044G1634 Punica granatum
PGR102G0964 Punica granatum
Phvul.003G146000 Phaseolus vulgaris
Phvul.007G092400 Phaseolus vulgaris
Potri.006G168400 Populus trichocarpa
Potri.008G043300 Populus trichocarpa
Potri.010G218300 Populus trichocarpa
Potri.018G092800 Populus trichocarpa
Prupe.1G086100 Prunus persica
Prupe.2G217400 Prunus persica
Psat0s2889g0080 Pisum sativum
Psat6g184920 Pisum sativum
PSO170G3450 Papaver somniferum
QL02p097728 Quercus lobata
QL08p056680 Quercus lobata
RcHm_v2.0_Chr1g0364021 Rosa chinensis
RcHm_v2.0_Chr4g0402471 Rosa chinensis
Rhsim01G0004800 Rhododendron simsii
Rhsim09G0153500 Rhododendron simsii
Rhsim09G0153600 Rhododendron simsii
Rhsim09G0153700 Rhododendron simsii
Rhsim09G0153800 Rhododendron simsii
Rhsim09G0153900 Rhododendron simsii
Sabra06G0129900 Salix brachista
Sabra08G0029900 Salix brachista
Sabra10G0168900 Salix brachista
Sabra16G0321600 Salix brachista
Sabra16G0323200 Salix brachista
Sabra18G0080000 Salix brachista
SalBow4G1965 Salvia bowleyana
SalBow6G2220 Salvia bowleyana
Sc18g0007500 Simmondsia chinensis
Sed0002867 Sechium edule
Sed0018084 Sechium edule
Sed0024933 Sechium edule
SGA_v2.0_scaffold17G07929 Striga asiatica
SGA_v2.0_scaffold62G21414 Striga asiatica
Sp7g28110 Schrenkiella parvula
TAR383G0288 Trochodendron aralioides
TAR383G0645 Trochodendron aralioides
TAR383G0698 Trochodendron aralioides
TAR383G0860 Trochodendron aralioides
TAR624G1326 Trochodendron aralioides
TAR625G0330 Trochodendron aralioides
TAR626G0085 Trochodendron aralioides
TAR626G1849 Trochodendron aralioides
TAR636G2901 Trochodendron aralioides
THA.LOC104803497 Tarenaya hassleriana
THA.LOC104819978 Tarenaya hassleriana
Thecc.09G173200 Theobroma cacao
Thecc.10G069300 Theobroma cacao
Thhalv10026023m.g Eutrema salsugineum
TPR.G16980 Trifolium pratense
TPR.G1799 Trifolium pratense
TPR.G5404 Trifolium pratense
TWI15G1220 Tripterygium wilfordii
TWI34G0269 Tripterygium wilfordii
TWI38G1817 Tripterygium wilfordii
TWI63G1498 Tripterygium wilfordii
VMungo0720G0200 Vigna mungo
VMungo1215G0012 Vigna mungo

User provided reference genes

Program Settings