Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41560 Brassica napus
A03p03330 Brassica napus
A03p19640 Brassica napus
A03p47240 Brassica napus
A08p12780 Brassica napus
A09p07370 Brassica napus
Aa31LG3G18910 Aethionema arabicum
Aa31LG9G15070 Aethionema arabicum
Actinidia02185 Actinidia chinensis
Actinidia25899 Actinidia chinensis
Actinidia31768 Actinidia chinensis
Ah.07g199010 Amaranthus hybridus
Ah.12g054120 Amaranthus hybridus
AL4G31750 Arabidopsis lyrata
AL6G17794 Arabidopsis lyrata
AL8G38370 Arabidopsis lyrata
Aqoxy3G02705 Aquilegia oxysepala
Aqoxy7G02055 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AIXL5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I909QJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y5VFEC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YNCC4F Arachis hypogaea
AT2G35658 Arabidopsis thaliana
AT4G16840 Arabidopsis thaliana
AT5G07490 Arabidopsis thaliana
AT5G61630 Arabidopsis thaliana
Atru.chr1.925 Acer truncatum
Atru.chr9.1234 Acer truncatum
AUR62007147 Chenopodium quinoa
AUR62018864 Chenopodium quinoa
AUR62033453 Chenopodium quinoa
BcaB01g03891 Brassica carinata
BcaB01g05694 Brassica carinata
BcaB01g05695 Brassica carinata
BcaB01g06045 Brassica carinata
BcaC01g05717 Brassica carinata
BcaC03g18078 Brassica carinata
BcaC06g33143 Brassica carinata
BcaC06g33261 Brassica carinata
BcaC09g50429 Brassica carinata
BcaNung00140 Brassica carinata
BolC2t12200H Brassica oleracea
BolC3t12913H Brassica oleracea
BolC3t14689H Brassica oleracea
BolC7t45056H Brassica oleracea
BolC8t48419H Brassica oleracea
BraA02t09098Z Brassica rapa
BraA03t09685Z Brassica rapa
BraA03t11217Z Brassica rapa
BraA03t13851Z Brassica rapa
BraA08t33266Z Brassica rapa
BraA09t36392Z Brassica rapa
C02p61500 Brassica napus
C03p03770 Brassica napus
C03p22900 Brassica napus
C07p45350 Brassica napus
CAN.G761.23 Capsicum annuum
CANSAT56G3417 Cannabis sativa
CARHR129910 Cardamine hirsuta
CARHR205640 Cardamine hirsuta
CARHR223470 Cardamine hirsuta
CARHR275430 Cardamine hirsuta
Carub.0004s1739 Capsella rubella
Carub.0006s0648 Capsella rubella
Carub.0007s2449 Capsella rubella
Carub.0008s2233 Capsella rubella
Ca_10413_v3 Cicer arietinum L.
Cc02_g04820 Coffea canephora
Cc08_g11590 Coffea canephora
CDE01G0248 Ceratophyllum demersum
CDE04G1477 Ceratophyllum demersum
Cfa003337 Carpinus fangiana
Ciclev10007152m.g Citrus clementina
Ciclev10010147m.g Citrus clementina
Ciclev10023073m.g Citrus clementina
CiPaw.07G184100 Carya illinoinensis
CiPaw.11G070300 Carya illinoinensis
ClCG00G004980 Citrullus lanatus
ClCG07G017110 Citrullus lanatus
ClCG10G002350 Citrullus lanatus
COL.COLO4_21678 Corchorus olitorius
Cpa.g.sc13.241 Carica papaya
CsaV3_1G029730 Cucumis sativus L.
CsaV3_3G002380 Cucumis sativus L.
CsaV3_4G004320 Cucumis sativus L.
CsaV3_5G020670 Cucumis sativus L.
DCAR_000647 Daucus carota
DCAR_004599 Daucus carota
DCAR_020169 Daucus carota
Dinv16875 Davidia involucrata
Dinv21689 Davidia involucrata
Dinv28854 Davidia involucrata
Duzib084G0167 Durio zibethinus
Duzib205G1260 Durio zibethinus
Duzib205G1418 Durio zibethinus
ECA234G2671 Erigeron canadensis
ECA238G2786 Erigeron canadensis
EL10Ac5g12296 Beta vulgaris
EL10Ac8g18592 Beta vulgaris
Eucgr.A02926 Eucalyptus grandis
Eucgr.E00369 Eucalyptus grandis
FAN01G3086 Fragaria x ananassa
FAN04G3127 Fragaria x ananassa
FAN08G3583 Fragaria x ananassa
FAN10G3636 Fragaria x ananassa
FAN13G2988 Fragaria x ananassa
FAN18G3981 Fragaria x ananassa
FvH4_5g20070 Fragaria vesca
FvH4_7g26830 Fragaria vesca
Glyma.01G205800 Glycine max
Glyma.10G193700 Glycine max
Glyma.17G117900 Glycine max
Glyma.20G196700 Glycine max
Gohir.A03G005500 Gossypium hirsutum
Gohir.A08G165900 Gossypium hirsutum
Gohir.A09G248900 Gossypium hirsutum
Gohir.D03G167000 Gossypium hirsutum
Gohir.D08G184800 Gossypium hirsutum
Gohir.D09G249800 Gossypium hirsutum
Gorai.003G176600 Gossypium raimondii
Gorai.004G194100 Gossypium raimondii
Gorai.006G274200 Gossypium raimondii
GSVIVG01007344001 Vitis vinifera
GSVIVG01013867001 Vitis vinifera
HanXRQChr08g0229131 Helianthus annuus
HanXRQChr10g0316761 Helianthus annuus
HanXRQChr14g0461131 Helianthus annuus
HanXRQChr17g0550011 Helianthus annuus
Haze_07981 Corylus avellana
Haze_25626 Corylus avellana
Hma1.2p1_1014F.1_g248010 Hydrangea macrophylla
Hma1.2p1_1305F.1_g274559 Hydrangea macrophylla
HPP92_005161 Vanilla planifolia
HPP92_023172 Vanilla planifolia
Hund11331 Selenicereus undatus
Hund14501 Selenicereus undatus
Lalb_Chr06g0169801 Lupinus albus
Lalb_Chr09g0324231 Lupinus albus
Lj1A974G32 Lonicera japonica
Lj4g0006068 Lotus japonicus
Lj4g0025656 Lotus japonicus
Lj5g0011838 Lotus japonicus
Lj8C48T14 Lonicera japonica
Lsat_1_v5_gn_2_127061 Lactuca sativa
Lsat_1_v5_gn_4_126000 Lactuca sativa
Lsat_1_v5_gn_5_97941 Lactuca sativa
Manes.01G086500 Manihot esculenta
Manes.02G043601 Manihot esculenta
Manes.06G130601 Manihot esculenta
Manes.14G039600 Manihot esculenta
MD04G1050500 Malus domestica
MD06G1049300 Malus domestica
MD07G1247700 Malus domestica
Medtr1g090200 Medicago truncatula
Medtr5g013240 Medicago truncatula
MELO3C013908.2 Cucumis melo
MELO3C017634.2 Cucumis melo
Migut.A01045 Erythranthe guttata
Migut.D02016 Erythranthe guttata
Migut.F00533 Erythranthe guttata
Migut.F01206 Erythranthe guttata
Migut.O00184 Erythranthe guttata
Nitab4.5_0000500g0010 Nicotiana tabacum
Nitab4.5_0002211g0010 Nicotiana tabacum
Nitab4.5_0002236g0070 Nicotiana tabacum
Nitab4.5_0009955g0020 Nicotiana tabacum
Nn1g00825 Nelumbo nucifera
Nn6g33810 Nelumbo nucifera
Nn8g39368 Nelumbo nucifera
Oeu017218.3 Olea europaea
Peaxi162Scf00167g01022 Petunia axillaris
Peaxi162Scf00446g00412 Petunia axillaris
PGR042G0596 Punica granatum
PGR042G0835 Punica granatum
PGSC0003DMG400026255 Solanum tuberosum
Phvul.002G000700 Phaseolus vulgaris
Phvul.007G138100 Phaseolus vulgaris
Potri.001G080500 Populus trichocarpa
Potri.001G152700 Populus trichocarpa
Potri.003G081900 Populus trichocarpa
Potri.008G015100 Populus trichocarpa
Potri.008G015800 Populus trichocarpa
Prupe.2G271700 Prunus persica
Prupe.5G059800 Prunus persica
PSO063G3783 Papaver somniferum
PSO339G5114 Papaver somniferum
PSO782G2859 Papaver somniferum
PSO801G0586 Papaver somniferum
QL09p027705 Quercus lobata
QL12p009508 Quercus lobata
RcHm_v2.0_Chr1g0373521 Rosa chinensis
RcHm_v2.0_Chr7g0204931 Rosa chinensis
Rhsim01G0078400 Rhododendron simsii
Rhsim04G0160200 Rhododendron simsii
Rhsim09G0189200 Rhododendron simsii
Sabra03G0052800 Salix brachista
SalBow3G0012 Salvia bowleyana
SalBow3G1605 Salvia bowleyana
Sc01g0008150 Simmondsia chinensis
Sc07g0009120 Simmondsia chinensis
Sc18g0000820 Simmondsia chinensis
Sed0000436 Sechium edule
Sed0025535 Sechium edule
SGA_v2.0_scaffold104G30217 Striga asiatica
SGA_v2.0_scaffold60G20833 Striga asiatica
Solyc05g052080.1 Solanum lycopersicum
Solyc08g078060.3 Solanum lycopersicum
Sopen05g030630 Solanum pennellii
Sopen08g026560 Solanum pennellii
Sp2g24840 Schrenkiella parvula
Sp4g17920 Schrenkiella parvula
Sp6g35370 Schrenkiella parvula
TAR625G0712 Trochodendron aralioides
TAR629G3508 Trochodendron aralioides
TAR636G0256 Trochodendron aralioides
THA.LOC104801625 Tarenaya hassleriana
Thecc.03G147400 Theobroma cacao
Thecc.03G243800 Theobroma cacao
Thhalv10005478m.g Eutrema salsugineum
Thhalv10015492m.g Eutrema salsugineum
Thhalv10017475m.g Eutrema salsugineum
Thhalv10026660m.g Eutrema salsugineum
TPR.G13393 Trifolium pratense
TPR.G31425 Trifolium pratense
TWI39G0461 Tripterygium wilfordii
TWI81G0439 Tripterygium wilfordii
vmacro00038 Vaccinium macrocarpon
vmacro09926 Vaccinium macrocarpon
Zm00001eb161880 Zea mays

User provided reference genes

Program Settings