Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p25990 Brassica napus
A05p10940 Brassica napus
A07p11350 Brassica napus
A09p37790 Brassica napus
Aa31LG6G5170 Aethionema arabicum
Aa31LG9G13710 Aethionema arabicum
Aa31sc225G10 Aethionema arabicum
Aa31sc225G20 Aethionema arabicum
Aa31sc225G30 Aethionema arabicum
Actinidia05644 Actinidia chinensis
Actinidia16556 Actinidia chinensis
Ah.14g089490 Amaranthus hybridus
Ah.14g089500 Amaranthus hybridus
Ah.14g089520 Amaranthus hybridus
AL1G41840 Arabidopsis lyrata
AL4G29510 Arabidopsis lyrata
AL4G30690 Arabidopsis lyrata
Aqoxy1G02393 Aquilegia oxysepala
Aqoxy4G00744 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.X3Z0KH Arachis hypogaea
AT1G28290 Arabidopsis thaliana
AT2G33790 Arabidopsis thaliana
AT2G34700 Arabidopsis thaliana
ATR0737G038 Amborella trichopoda
Atru.chr10.1864 Acer truncatum
AUR62017024 Chenopodium quinoa
AUR62017025 Chenopodium quinoa
BcaB01g02614 Brassica carinata
BcaB02g09517 Brassica carinata
BcaB02g09518 Brassica carinata
BcaB03g13938 Brassica carinata
BcaB07g32438 Brassica carinata
BcaC02g07773 Brassica carinata
BcaC02g07775 Brassica carinata
BcaC02g11549 Brassica carinata
BcaC05g26833 Brassica carinata
BcaC06g35349 Brassica carinata
BolC4t22995H Brassica oleracea
BolC4t27803H Brassica oleracea
BolC4t27804H Brassica oleracea
BolC5t31428H Brassica oleracea
BolC7t42219H Brassica oleracea
BraA04t18102Z Brassica rapa
BraA05t20040Z Brassica rapa
BraA07t28924Z Brassica rapa
BraA09t39290Z Brassica rapa
C04p14040 Brassica napus
C04p63290 Brassica napus
C04p63300 Brassica napus
C05p27140 Brassica napus
C07p17130 Brassica napus
CAN.G529.10 Capsicum annuum
CAN.G529.5 Capsicum annuum
CAN.G529.8 Capsicum annuum
CANSAT35G1820 Cannabis sativa
CARHR027780 Cardamine hirsuta
CARHR127890 Cardamine hirsuta
CARHR128860 Cardamine hirsuta
Carub.0001s2673 Capsella rubella
Carub.0004s1545 Capsella rubella
Carub.0004s1639 Capsella rubella
Ca_18551_v3 Cicer arietinum L.
Cc02_g13480 Coffea canephora
Cfa000485 Carpinus fangiana
Cfa002262 Carpinus fangiana
CiPaw.09G060900 Carya illinoinensis
ClCG01G023040 Citrullus lanatus
ClCG03G008180 Citrullus lanatus
COL.COLO4_31456 Corchorus olitorius
Cpa.g.sc27.37 Carica papaya
CsaV3_1G012370 Cucumis sativus L.
CsaV3_6G050170 Cucumis sativus L.
CSS0013482 Camellia sinensis var. sinensis
DCAR_004069 Daucus carota
DCAR_008035 Daucus carota
Dinv17322 Davidia involucrata
Dinv40571 Davidia involucrata
Duzib160G0415 Durio zibethinus
Duzib192G0967 Durio zibethinus
Duzib235G1045 Durio zibethinus
ECA234G4352 Erigeron canadensis
ECA236G1979 Erigeron canadensis
EL10Ac8g20392 Beta vulgaris
Eucgr.D00613 Eucalyptus grandis
Eucgr.E03269 Eucalyptus grandis
FAN11G0879 Fragaria x ananassa
FAN16G3267 Fragaria x ananassa
FAN21G3284 Fragaria x ananassa
FAN25G2997 Fragaria x ananassa
FvH4_3g09040 Fragaria vesca
Glyma.13G178700 Glycine max
Gohir.A05G161100 Gossypium hirsutum
Gohir.A06G128400 Gossypium hirsutum
Gohir.D05G163801 Gossypium hirsutum
Gohir.D06G132500 Gossypium hirsutum
Gorai.009G168900 Gossypium raimondii
Gorai.010G154300 Gossypium raimondii
GSVIVG01007286001 Vitis vinifera
HanXRQChr04g0124251 Helianthus annuus
HanXRQChr16g0516201 Helianthus annuus
Haze_06431 Corylus avellana
Hma1.2p1_0736F.1_g210750 Hydrangea macrophylla
HPP92_006381 Vanilla planifolia
Hund21219 Selenicereus undatus
Lalb_Chr16g0383811 Lupinus albus
Lalb_Chr16g0383821 Lupinus albus
Lalb_Chr16g0383831 Lupinus albus
Lalb_Chr16g0383841 Lupinus albus
Lalb_Chr18g0059561 Lupinus albus
Lalb_Chr18g0059571 Lupinus albus
Lalb_Chr20g0121811 Lupinus albus
Lj1A1203T34 Lonicera japonica
Lj2A289T21 Lonicera japonica
Lj6g0021953 Lotus japonicus
Lsat_1_v5_gn_4_53840 Lactuca sativa
Lsat_1_v5_gn_7_21560 Lactuca sativa
Manes.16G028850 Manihot esculenta
Manes.17G046500 Manihot esculenta
MD05G1338000 Malus domestica
MD10G1293100 Malus domestica
Medtr1g055415 Medicago truncatula
Medtr2g097240 Medicago truncatula
Medtr3g012020 Medicago truncatula
Medtr4g017240 Medicago truncatula
Medtr4g046767 Medicago truncatula
Medtr4g046780 Medicago truncatula
Medtr4g066680 Medicago truncatula
Medtr4g088735 Medicago truncatula
Medtr4g088740 Medicago truncatula
Medtr4g124400 Medicago truncatula
Medtr5g047890 Medicago truncatula
Medtr6g042490 Medicago truncatula
Medtr8g092230 Medicago truncatula
MELO3C002610.2 Cucumis melo
MELO3C007279.2 Cucumis melo
MSTRG.7337 Avicennia marina
Nitab4.5_0001652g0100 Nicotiana tabacum
Nitab4.5_0001652g0140 Nicotiana tabacum
Nitab4.5_0001652g0150 Nicotiana tabacum
Nitab4.5_0001652g0160 Nicotiana tabacum
Nitab4.5_0001652g0170 Nicotiana tabacum
Nitab4.5_0009438g0020 Nicotiana tabacum
Nitab4.5_0011894g0010 Nicotiana tabacum
Nitab4.5_0012561g0010 Nicotiana tabacum
Oeu033907.1 Olea europaea
Oeu064785.1 Olea europaea
Os01g0725900 Oryza sativa ssp. japonica
Os01g0726100 Oryza sativa ssp. japonica
Os05g0531200 Oryza sativa ssp. japonica
Os05g0531400 Oryza sativa ssp. japonica
Peaxi162Scf00250g00029 Petunia axillaris
Peaxi162Scf00250g00037 Petunia axillaris
Peaxi162Scf00250g00053 Petunia axillaris
Peaxi162Scf00250g00058 Petunia axillaris
Peaxi162Scf74053g00003 Petunia axillaris
PGR004G0870 Punica granatum
PGR042G0148 Punica granatum
PGR042G3344 Punica granatum
PGSC0003DMG400029695 Solanum tuberosum
PGSC0003DMG400029698 Solanum tuberosum
PGSC0003DMG400029699 Solanum tuberosum
PGSC0003DMG400029700 Solanum tuberosum
Phvul.002G229200 Phaseolus vulgaris
Potri.004G044700 Populus trichocarpa
Potri.011G053600 Populus trichocarpa
Prupe.4G048800 Prunus persica
Prupe.7G084000 Prunus persica
Psat7g114200 Pisum sativum
PSO017G7396 Papaver somniferum
PSO135G0310 Papaver somniferum
PSO210G4623 Papaver somniferum
PSO339G4116 Papaver somniferum
PSO349G0113 Papaver somniferum
PSO541G0207 Papaver somniferum
PSO675G7840 Papaver somniferum
PSO724G1154 Papaver somniferum
PSO832G2944 Papaver somniferum
QL05p041024 Quercus lobata
QL05p041061 Quercus lobata
RcHm_v2.0_Chr5g0008631 Rosa chinensis
Rhsim02G0131200 Rhododendron simsii
Rhsim02G0131700 Rhododendron simsii
Rhsim13G0179100 Rhododendron simsii
Sabra04G0027800 Salix brachista
Sabra11G0037400 Salix brachista
SalBow8G0350 Salvia bowleyana
SalBow8G4678 Salvia bowleyana
SalBow8G5468 Salvia bowleyana
Sc05g0007600 Simmondsia chinensis
Sc24g0001000 Simmondsia chinensis
Sed0006317 Sechium edule
Sed0027489 Sechium edule
Sed0027600 Sechium edule
SGA_v2.0_scaffold22G09698 Striga asiatica
Solyc02g078040.3 Solanum lycopersicum
Solyc02g078050.4 Solanum lycopersicum
Solyc02g078060.1 Solanum lycopersicum
Solyc02g078100.3 Solanum lycopersicum
Sopen02g022880 Solanum pennellii
Sopen02g022890 Solanum pennellii
Sopen02g022900 Solanum pennellii
Sopen02g022930 Solanum pennellii
Sp1g24490 Schrenkiella parvula
Sp4g16170 Schrenkiella parvula
Sp4g16980 Schrenkiella parvula
TAR627G0353 Trochodendron aralioides
THA.LOC104812275 Tarenaya hassleriana
THA.LOC104814217 Tarenaya hassleriana
THA.LOC104820687 Tarenaya hassleriana
Thecc.06G185700 Theobroma cacao
Thhalv10008255m.g Eutrema salsugineum
Thhalv10017961m.g Eutrema salsugineum
TPR.G19125 Trifolium pratense
TPR.G23035 Trifolium pratense
TPR.G31168 Trifolium pratense
TPR.G33106 Trifolium pratense
TPR.G40408 Trifolium pratense
TPR.G7042 Trifolium pratense
TWI38G2351 Tripterygium wilfordii
unitig_22.g6231 Utricularia gibba
vmacro03874 Vaccinium macrocarpon
vmacro03876 Vaccinium macrocarpon
vmacro15914 Vaccinium macrocarpon
VMungo0251G3565 Vigna mungo
Zm00001eb154390 Zea mays
Zm00001eb154410 Zea mays
Zm00001eb293200 Zea mays
Zm00001eb293210 Zea mays
Zm00001eb361780 Zea mays

User provided reference genes

Program Settings