Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01600 Brassica napus
A04p01610 Brassica napus
A04p01620 Brassica napus
A04p01630 Brassica napus
A07p25070 Brassica napus
A09p52700 Brassica napus
Aa31LG10G14520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4635 Anthoceros agrestis
Actinidia12163 Actinidia chinensis
Actinidia40396 Actinidia chinensis
Ah.03g137210 Amaranthus hybridus
AL5G42330 Arabidopsis lyrata
AL5G42670 Arabidopsis lyrata
AL5G42700 Arabidopsis lyrata
AL5G42710 Arabidopsis lyrata
Aqoxy3G02815 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36H6SK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8DE1JP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I6YUT2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NTI4MN Arachis hypogaea
AT3G60415 Arabidopsis thaliana
AT3G60420 Arabidopsis thaliana
AT3G60440 Arabidopsis thaliana
AT3G60450 Arabidopsis thaliana
AT4G07455 Arabidopsis thaliana
ATR0049G070 Amborella trichopoda
ATR0049G079 Amborella trichopoda
ATR0057G052 Amborella trichopoda
ATR0057G103 Amborella trichopoda
ATR0199G020 Amborella trichopoda
Atru.chr5.184 Acer truncatum
AUR62004126 Chenopodium quinoa
AUR62013715 Chenopodium quinoa
BcaB02g07418 Brassica carinata
BcaB02g07419 Brassica carinata
BcaB02g07420 Brassica carinata
BcaB02g08167 Brassica carinata
BcaB02g08168 Brassica carinata
BcaB02g08169 Brassica carinata
BcaC02g10155 Brassica carinata
BcaC02g10157 Brassica carinata
BcaC07g40561 Brassica carinata
BcaC07g40562 Brassica carinata
BcaC07g40563 Brassica carinata
BcaC07g42780 Brassica carinata
BcaC07g42781 Brassica carinata
BcaC08g45050 Brassica carinata
BcaC08g45051 Brassica carinata
BcaC08g45052 Brassica carinata
BcaC08g45057 Brassica carinata
BcaC08g45059 Brassica carinata
BolC4t24764H Brassica oleracea
BolC4t24765H Brassica oleracea
BolC4t24767H Brassica oleracea
BolC4t24768H Brassica oleracea
BolC6t37830H Brassica oleracea
BolC6t37844H Brassica oleracea
BolC8t51133H Brassica oleracea
BolC8t51134H Brassica oleracea
BraA04t15884Z Brassica rapa
BraA04t15885Z Brassica rapa
BraA04t15886Z Brassica rapa
BraA04t15887Z Brassica rapa
BraA07t30147Z Brassica rapa
BraA09t40700Z Brassica rapa
BraA09t40701Z Brassica rapa
C04p32110 Brassica napus
C04p32150 Brassica napus
C04p32160 Brassica napus
C04p32170 Brassica napus
C06p26680 Brassica napus
C08p35400 Brassica napus
C08p35420 Brassica napus
CAN.G365.2 Capsicum annuum
CANSAT21G0187 Cannabis sativa
CARHR170740 Cardamine hirsuta
CARHR170780 Cardamine hirsuta
CARHR170790 Cardamine hirsuta
CARHR170800 Cardamine hirsuta
Carub.0005s2715 Capsella rubella
Carub.0005s2716 Capsella rubella
Carub.0005s2717 Capsella rubella
Ca_20449_v3 Cicer arietinum L.
Ca_23127_v3 Cicer arietinum L.
CBR_g38027 Chara braunii
CBR_g48309 Chara braunii
Cc02_g24830 Coffea canephora
CDE05G1330 Ceratophyllum demersum
Cfa011103 Carpinus fangiana
Ciclev10021618m.g Citrus clementina
CiPaw.13G028900 Carya illinoinensis
ClCG05G000360 Citrullus lanatus
ClCG05G000370 Citrullus lanatus
COL.COLO4_12440 Corchorus olitorius
Cpa.g.sc101.38 Carica papaya
Cre03.g165900 Chlamydomonas reinhardtii
Cre10.g440250 Chlamydomonas reinhardtii
CsaV3_3G007520 Cucumis sativus L.
CsaV3_3G007530 Cucumis sativus L.
CSS0021008 Camellia sinensis var. sinensis
CSS0034288 Camellia sinensis var. sinensis
DCAR_015822 Daucus carota
DCAR_029777 Daucus carota
Dinv43646 Davidia involucrata
Dinv44082 Davidia involucrata
Duzib133G1239 Durio zibethinus
Duzib138G0568 Durio zibethinus
ECA236G3085 Erigeron canadensis
EL10Ac1g00797 Beta vulgaris
Eucgr.D01499 Eucalyptus grandis
Eucgr.D01506 Eucalyptus grandis
Eucgr.E01584 Eucalyptus grandis
Eucgr.E01587 Eucalyptus grandis
Eucgr.E01588 Eucalyptus grandis
Eucgr.E01589 Eucalyptus grandis
Eucgr.E01590 Eucalyptus grandis
Eucgr.E01591 Eucalyptus grandis
Eucgr.L02405 Eucalyptus grandis
Eucgr.L02406 Eucalyptus grandis
FAN01G2888 Fragaria x ananassa
FAN03G2548 Fragaria x ananassa
FAN06G1981 Fragaria x ananassa
FAN06G4833 Fragaria x ananassa
FAN10G4277 Fragaria x ananassa
FAN10G4311 Fragaria x ananassa
FvH4_7g09660 Fragaria vesca
Glyma.01G074500 Glycine max
Glyma.07G110600 Glycine max
Glyma.08G339000 Glycine max
Gohir.A08G059700 Gossypium hirsutum
Gohir.A11G076800 Gossypium hirsutum
Gohir.D08G068900 Gossypium hirsutum
Gohir.D11G081200 Gossypium hirsutum
Gorai.004G072200 Gossypium raimondii
Gorai.007G086900 Gossypium raimondii
GSVIVG01018233001 Vitis vinifera
HanXRQChr04g0123531 Helianthus annuus
HanXRQChr06g0168771 Helianthus annuus
Haze_02764 Corylus avellana
Hma1.2p1_0199F.1_g085700 Hydrangea macrophylla
Hma1.2p1_0486F.1_g163270 Hydrangea macrophylla
HPP92_022462 Vanilla planifolia
Hund27397 Selenicereus undatus
Lalb_Chr03g0040251 Lupinus albus
Lalb_Chr07g0195601 Lupinus albus
Lalb_Chr16g0390301 Lupinus albus
Lj1g0001474 Lotus japonicus
Lj3g0007973 Lotus japonicus
Lj9A559T47 Lonicera japonica
Lsat_1_v5_gn_7_10420 Lactuca sativa
Manes.01G271500 Manihot esculenta
Mapoly0009s0020 Marchantia polymorpha
MBI16_g00674_MAGBIO Magnolia biondii
MD00G1058700 Malus domestica
MD07G1100900 Malus domestica
Medtr0900s0010 Medicago truncatula
Medtr0901s0010 Medicago truncatula
Medtr7g050425 Medicago truncatula
Medtr8g006290 Medicago truncatula
MELO3C005974.2 Cucumis melo
MELO3C005975.2 Cucumis melo
Migut.N01758 Erythranthe guttata
MSTRG.28160 Avicennia marina
MSTRG.4921 Avicennia marina
Nitab4.5_0002598g0010 Nicotiana tabacum
Nitab4.5_0011467g0010 Nicotiana tabacum
Nn1g00916 Nelumbo nucifera
Nn6g33871 Nelumbo nucifera
Oeu020088.1 Olea europaea
Oeu035672.1 Olea europaea
Os03g0101500 Oryza sativa ssp. japonica
Peaxi162Scf01052g00023 Petunia axillaris
PGR004G0268 Punica granatum
PGR042G2815 Punica granatum
PGR042G3287 Punica granatum
PGR042G3364 Punica granatum
PGSC0003DMG400006995 Solanum tuberosum
Phvul.008G140400 Phaseolus vulgaris
Phvul.010G053300 Phaseolus vulgaris
Potri.002G141000 Populus trichocarpa
Potri.014G054800 Populus trichocarpa
Pp3c19_4180 Physcomitrium patens
Prupe.2G124000 Prunus persica
Psat3g156440 Pisum sativum
Psat3g156480 Pisum sativum
Psat4g226040 Pisum sativum
PSO063G4465 Papaver somniferum
PSO782G0141 Papaver somniferum
QL04p033433 Quercus lobata
RcHm_v2.0_Chr1g0346561 Rosa chinensis
Rhsim07G0034100 Rhododendron simsii
Sabra02G0110000 Salix brachista
Sabra14G0040500 Salix brachista
SalBow5G3534 Salvia bowleyana
SalBow5G5077 Salvia bowleyana
Sc02g0002950 Simmondsia chinensis
Sed0015490 Sechium edule
Sed0015747 Sechium edule
SGA_v2.0_scaffold116G32307 Striga asiatica
SGA_v2.0_scaffold43G16521 Striga asiatica
SHI13598 Sapria himalayana
SHI13599 Sapria himalayana
SMO164G0131 Selaginella moellendorffii
Solyc05g050800.3 Solanum lycopersicum
Sopen05g029280 Solanum pennellii
Sp5g02780 Schrenkiella parvula
Sp5g02790 Schrenkiella parvula
Sp5g02800 Schrenkiella parvula
Sp5g14680 Schrenkiella parvula
TAR374G1292 Trochodendron aralioides
TAR629G1614 Trochodendron aralioides
THA.LOC104802488 Tarenaya hassleriana
THA.LOC104817198 Tarenaya hassleriana
Thecc.01G389300 Theobroma cacao
Thhalv10006148m.g Eutrema salsugineum
Thhalv10006156m.g Eutrema salsugineum
Thhalv10006161m.g Eutrema salsugineum
TPR.G24961 Trifolium pratense
TPR.G39042 Trifolium pratense
TPR.G39096 Trifolium pratense
TPR.G40730 Trifolium pratense
TWI14G0692 Tripterygium wilfordii
TWI14G1416 Tripterygium wilfordii
TWI59G0774 Tripterygium wilfordii
vmacro13479 Vaccinium macrocarpon
VMungo0331G1355 Vigna mungo
VMungo1309G0879 Vigna mungo
VMungo1383G2899 Vigna mungo
Zm00001eb404520 Zea mays

User provided reference genes

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