Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01010 Brassica napus
A07p25600 Brassica napus
A09p53650 Brassica napus
Aa31LG10G15410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2091 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1373 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.203 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3878 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4627 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5143 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.90 Anthoceros agrestis
Actinidia10091 Actinidia chinensis
Actinidia20178 Actinidia chinensis
Actinidia28487 Actinidia chinensis
Ah.05g180000 Amaranthus hybridus
AL5G43980 Arabidopsis lyrata
Aqoxy7G00225 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.49J1TU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVK0R9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WVBE1P Arachis hypogaea
AT3G61590 Arabidopsis thaliana
ATR1093G033 Amborella trichopoda
AUR62004432 Chenopodium quinoa
AUR62010787 Chenopodium quinoa
AUR62019783 Chenopodium quinoa
AUR62022639 Chenopodium quinoa
BcaB02g07368 Brassica carinata
BcaB02g08152 Brassica carinata
BcaC02g10235 Brassica carinata
BcaC07g40660 Brassica carinata
BcaC07g40667 Brassica carinata
BcaC07g42675 Brassica carinata
BcaC07g42676 Brassica carinata
BcaC07g42677 Brassica carinata
BcaC07g42680 Brassica carinata
BcaC08g45140 Brassica carinata
BolC4t24659H Brassica oleracea
BolC6t37928H Brassica oleracea
BolC8t51226H Brassica oleracea
BraA04t15818Z Brassica rapa
BraA07t30201Z Brassica rapa
BraA09t40787Z Brassica rapa
C04p31230 Brassica napus
C06p27590 Brassica napus
C08p36430 Brassica napus
CAN.G78.147 Capsicum annuum
CANSAT56G3650 Cannabis sativa
CARHR171900 Cardamine hirsuta
Carub.0005s2828 Capsella rubella
Ca_09483_v3 Cicer arietinum L.
Ca_23550_v3 Cicer arietinum L.
Ca_23557_v3 Cicer arietinum L.
Cc02_g38810 Coffea canephora
CDE04G0104 Ceratophyllum demersum
Cfa003849 Carpinus fangiana
Ciclev10020418m.g Citrus clementina
CiPaw.01G070300 Carya illinoinensis
CiPaw.02G037400 Carya illinoinensis
ClCG05G000990 Citrullus lanatus
COL.COLO4_06357 Corchorus olitorius
Cpa.g.sc184.7 Carica papaya
CsaV3_3G008300 Cucumis sativus L.
CSS0014351 Camellia sinensis var. sinensis
CSS0028061 Camellia sinensis var. sinensis
CSS0046188 Camellia sinensis var. sinensis
DCAR_005370 Daucus carota
Dinv11995 Davidia involucrata
Dinv32540 Davidia involucrata
Dinv37565 Davidia involucrata
Dinv38881 Davidia involucrata
Dinv43883 Davidia involucrata
Duzib133G0978 Durio zibethinus
Duzib138G1905 Durio zibethinus
ECA234G2880 Erigeron canadensis
ECA240G4380 Erigeron canadensis
ECA246G5064 Erigeron canadensis
EL10Ac1g00330 Beta vulgaris
EL10Ac5g12860 Beta vulgaris
Eucgr.D02335 Eucalyptus grandis
FAN01G2107 Fragaria x ananassa
FAN03G0870 Fragaria x ananassa
FAN06G2209 Fragaria x ananassa
FAN06G3916 Fragaria x ananassa
FAN10G1408 Fragaria x ananassa
FAN10G2614 Fragaria x ananassa
FvH4_7g15730 Fragaria vesca
Glyma.03G254500 Glycine max
Glyma.19G252100 Glycine max
Gohir.A08G126700 Gossypium hirsutum
Gohir.A11G093400 Gossypium hirsutum
Gohir.D08G148100 Gossypium hirsutum
Gohir.D11G098400 Gossypium hirsutum
Gorai.004G153700 Gossypium raimondii
Gorai.007G104600 Gossypium raimondii
GSVIVG01019461001 Vitis vinifera
GSVIVG01027030001 Vitis vinifera
HanXRQChr16g0523861 Helianthus annuus
HanXRQChr17g0535501 Helianthus annuus
HanXRQChr17g0561991 Helianthus annuus
Haze_15601 Corylus avellana
Hma1.2p1_0384F.1_g140870 Hydrangea macrophylla
Hma1.2p1_0397F.1_g143750 Hydrangea macrophylla
HPP92_004575 Vanilla planifolia
HPP92_020014 Vanilla planifolia
Hund16684 Selenicereus undatus
Hund27232 Selenicereus undatus
Lalb_Chr04g0261791 Lupinus albus
Lalb_Chr10g0096491 Lupinus albus
Lalb_Chr18g0044251 Lupinus albus
Lj1g0007597 Lotus japonicus
Lj2P174T70 Lonicera japonica
Lj3g0000411 Lotus japonicus
Lj3g0003098 Lotus japonicus
Lj3P338T13 Lonicera japonica
Lj9E594T0 Lonicera japonica
Lj9P594T26 Lonicera japonica
Lsat_1_v5_gn_3_9721 Lactuca sativa
Lsat_1_v5_gn_4_34441 Lactuca sativa
Manes.01G250600 Manihot esculenta
Manes.05G027500 Manihot esculenta
Mapoly0001s0051 Marchantia polymorpha
Mapoly0055s0081 Marchantia polymorpha
Mapoly0168s0028 Marchantia polymorpha
MBI01_g10122_MAGBIO Magnolia biondii
MBI06_g04298_MAGBIO Magnolia biondii
MBI07_g06328_MAGBIO Magnolia biondii
MBI16_g09752_MAGBIO Magnolia biondii
MD01G1073800 Malus domestica
MD07G1142500 Malus domestica
Medtr8g028220 Medicago truncatula
Medtr8g028250 Medicago truncatula
MELO3C006049.2 Cucumis melo
Migut.B01816 Erythranthe guttata
Migut.N01573 Erythranthe guttata
MSTRG.17309 Avicennia marina
MSTRG.20878 Avicennia marina
Nitab4.5_0000305g0320 Nicotiana tabacum
Nitab4.5_0004613g0080 Nicotiana tabacum
Nn1g01765 Nelumbo nucifera
Nn7g37341 Nelumbo nucifera
Oeu008676.1 Olea europaea
Oeu036574.1 Olea europaea
Oeu054372.1 Olea europaea
Oeu063669.1 Olea europaea
Os01g0659900 Oryza sativa ssp. japonica
Os02g0260200 Oryza sativa ssp. japonica
Peaxi162Scf01367g00003 Petunia axillaris
PGR031G0299 Punica granatum
PGR042G0461 Punica granatum
PGSC0003DMG400000081 Solanum tuberosum
Phvul.006G109200 Phaseolus vulgaris
Phvul.010G107700 Phaseolus vulgaris
Potri.002G166500 Populus trichocarpa
Potri.014G093200 Populus trichocarpa
Pp3c10_20160 Physcomitrium patens
Pp3c13_22240 Physcomitrium patens
Pp3c14_15770 Physcomitrium patens
Pp3c14_3090 Physcomitrium patens
Pp3c19_12060 Physcomitrium patens
Pp3c20_17310 Physcomitrium patens
Pp3c20_3080 Physcomitrium patens
Pp3c22_15730 Physcomitrium patens
Pp3c22_8810 Physcomitrium patens
Pp3c23_11450 Physcomitrium patens
Pp3c23_5660 Physcomitrium patens
Pp3c24_1980 Physcomitrium patens
Pp3c26_600 Physcomitrium patens
Pp3c2_32770 Physcomitrium patens
Prupe.2G181900 Prunus persica
Psat4g158360 Pisum sativum
Psat4g213360 Pisum sativum
PSO135G0840 Papaver somniferum
PSO384G2329 Papaver somniferum
QL02p032180 Quercus lobata
QL02p032184 Quercus lobata
QL04p057656 Quercus lobata
RcHm_v2.0_Chr1g0358441 Rosa chinensis
Rhsim07G0008700 Rhododendron simsii
Sabra02G0145100 Salix brachista
Sabra14G0067600 Salix brachista
SalBow5G2266 Salvia bowleyana
Sc01g0003080 Simmondsia chinensis
Sc23g0002420 Simmondsia chinensis
Sc26g0000790 Simmondsia chinensis
Sed0008353 Sechium edule
Sed0023698 Sechium edule
SEGI_04012 Sequoiadendron giganteum
SEGI_04786 Sequoiadendron giganteum
SEGI_09112 Sequoiadendron giganteum
SEGI_09375 Sequoiadendron giganteum
SEGI_36099 Sequoiadendron giganteum
SEGI_39892 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05706 Striga asiatica
SGA_v2.0_scaffold4G02268 Striga asiatica
SMO116G0258 Selaginella moellendorffii
SMO117G0357 Selaginella moellendorffii
SMO145G0155 Selaginella moellendorffii
SMO145G0192 Selaginella moellendorffii
SMO174G0259 Selaginella moellendorffii
SMO232G0011 Selaginella moellendorffii
SMO239G0172 Selaginella moellendorffii
SMO296G0037 Selaginella moellendorffii
SMO304G0062 Selaginella moellendorffii
SMO364G0869 Selaginella moellendorffii
Solyc01g095370.3 Solanum lycopersicum
Sopen01g039140 Solanum pennellii
Sopen05g028590 Solanum pennellii
Sp5g01820 Schrenkiella parvula
TAR381G0769 Trochodendron aralioides
TAR629G3351 Trochodendron aralioides
TAR636G3621 Trochodendron aralioides
THA.LOC104802052 Tarenaya hassleriana
THA.LOC104817327 Tarenaya hassleriana
Thecc.01G349400 Theobroma cacao
Thhalv10005970m.g Eutrema salsugineum
TPR.G21283 Trifolium pratense
TPR.G21289 Trifolium pratense
TWI14G0325 Tripterygium wilfordii
TWI14G0349 Tripterygium wilfordii
TWI23G1166 Tripterygium wilfordii
unitig_62.g23803 Utricularia gibba
unitig_747.g21324 Utricularia gibba
unitig_899.g14814 Utricularia gibba
vmacro13211 Vaccinium macrocarpon
VMungo0331G0185 Vigna mungo
VMungo0540G0655 Vigna mungo
Zm00001eb157830 Zea mays
Zm00001eb203860 Zea mays
Zm00001eb237930 Zea mays

User provided reference genes

Program Settings