Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37080 Brassica napus
A09p68000 Brassica napus
A10p02590 Brassica napus
Aa31LG9G480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.47 Anthoceros agrestis
Actinidia00009 Actinidia chinensis
Actinidia00010 Actinidia chinensis
Actinidia14292 Actinidia chinensis
Actinidia17198 Actinidia chinensis
Ah.07g202980 Amaranthus hybridus
Ah.13g073350 Amaranthus hybridus
AL1G13770 Arabidopsis lyrata
AL2G15630 Arabidopsis lyrata
AL2G16760 Arabidopsis lyrata
AL3G52110 Arabidopsis lyrata
AL7G36070 Arabidopsis lyrata
Aqoxy1G03804 Aquilegia oxysepala
Aqoxy5G03318 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.76V308 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6A919 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UT62QM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XGW13D Arachis hypogaea
AT1G04170 Arabidopsis thaliana
AT2G18720 Arabidopsis thaliana
AT4G18330 Arabidopsis thaliana
ATR0691G297 Amborella trichopoda
ATR0733G074 Amborella trichopoda
Atru.chr2.1349 Acer truncatum
Atru.chr2.1350 Acer truncatum
Atru.chr4.2877 Acer truncatum
Atru.chr4.2878 Acer truncatum
AUR62002421 Chenopodium quinoa
AUR62023730 Chenopodium quinoa
AUR62023767 Chenopodium quinoa
AUR62028567 Chenopodium quinoa
AUR62033522 Chenopodium quinoa
BcaC05g24467 Brassica carinata
BcaC07g36932 Brassica carinata
BcaC07g42202 Brassica carinata
BolC5t29018H Brassica oleracea
BolC8t46893H Brassica oleracea
BolC8t52771H Brassica oleracea
BraA08t35608Z Brassica rapa
BraA09t42135Z Brassica rapa
BraA10t42528Z Brassica rapa
C05p02390 Brassica napus
C08p00920 Brassica napus
C08p52440 Brassica napus
CAN.G261.2 Capsicum annuum
CAN.G388.37 Capsicum annuum
CAN.G484.44 Capsicum annuum
CANSAT78G1448 Cannabis sativa
CARHR003510 Cardamine hirsuta
Carub.0001s0332 Capsella rubella
Ca_03674_v3 Cicer arietinum L.
CBR_g3642 Chara braunii
CBR_g38890 Chara braunii
Cc03_g01700 Coffea canephora
Cc03_g02900 Coffea canephora
CDE01G0663 Ceratophyllum demersum
Cfa015400 Carpinus fangiana
Cfa026927 Carpinus fangiana
Ciclev10004918m.g Citrus clementina
CiPaw.01G147100 Carya illinoinensis
CiPaw.02G081700 Carya illinoinensis
ClCG11G000780 Citrullus lanatus
COL.COLO4_12197 Corchorus olitorius
COL.COLO4_13843 Corchorus olitorius
Cpa.g.sc16.190 Carica papaya
Cre02.g098450 Chlamydomonas reinhardtii
CsaV3_5G012490 Cucumis sativus L.
CSS0021174 Camellia sinensis var. sinensis
CSS0034537 Camellia sinensis var. sinensis
CSS0049767 Camellia sinensis var. sinensis
DCAR_002471 Daucus carota
DCAR_023289 Daucus carota
Dinv29293 Davidia involucrata
Dinv29763 Davidia involucrata
Dinv44364 Davidia involucrata
Duzib052G0503 Durio zibethinus
Duzib151G0616 Durio zibethinus
Duzib212G0782 Durio zibethinus
ECA233G5556 Erigeron canadensis
ECA248G3947 Erigeron canadensis
EL10Ac1g00775 Beta vulgaris
EL10Ac2g02959 Beta vulgaris
Eucgr.B01599 Eucalyptus grandis
Eucgr.H03938 Eucalyptus grandis
FAN07G2157 Fragaria x ananassa
FAN12G1834 Fragaria x ananassa
FAN12G3433 Fragaria x ananassa
FAN15G3616 Fragaria x ananassa
FAN17G1123 Fragaria x ananassa
FAN20G2421 Fragaria x ananassa
FAN24G0087 Fragaria x ananassa
FAN27G0093 Fragaria x ananassa
FAN27G0301 Fragaria x ananassa
FvH4_2g07310 Fragaria vesca
FvH4_4g18420 Fragaria vesca
Glyma.08G171500 Glycine max
Glyma.15G255900 Glycine max
Gohir.A01G033000 Gossypium hirsutum
Gohir.A09G062700 Gossypium hirsutum
Gohir.A09G062800 Gossypium hirsutum
Gohir.D01G023487 Gossypium hirsutum
Gohir.D09G061700 Gossypium hirsutum
Gohir.D09G061800 Gossypium hirsutum
Gorai.002G028500 Gossypium raimondii
Gorai.006G076400 Gossypium raimondii
Gorai.006G076500 Gossypium raimondii
GSVIVG01026269001 Vitis vinifera
GSVIVG01034691001 Vitis vinifera
HanXRQChr01g0023891 Helianthus annuus
HanXRQChr11g0343621 Helianthus annuus
HanXRQChr11g0349361 Helianthus annuus
Haze_18317 Corylus avellana
Haze_26365 Corylus avellana
Hma1.2p1_0078F.1_g040460 Hydrangea macrophylla
Hma1.2p1_1807F.1_g303335 Hydrangea macrophylla
Hma1.2p1_1807F.1_g303340 Hydrangea macrophylla
HPP92_000106 Vanilla planifolia
Lalb_Chr04g0256511 Lupinus albus
Lalb_Chr10g0097881 Lupinus albus
Lalb_Chr17g0340191 Lupinus albus
Lj1g0024577 Lotus japonicus
Lj3C805T5 Lonicera japonica
Lj3g0005693 Lotus japonicus
Lj5g0021090 Lotus japonicus
Lj6C678T8 Lonicera japonica
Lj6g0010074 Lotus japonicus
Lsat_1_v5_gn_1_77700 Lactuca sativa
Manes.01G138000 Manihot esculenta
Mapoly0005s0129 Marchantia polymorpha
MBI19_g25359_MAGBIO Magnolia biondii
MCO14G231 Micromonas commoda
MD00G1127900 Malus domestica
MD16G1166900 Malus domestica
Medtr2g069440 Medicago truncatula
Medtr2g075870 Medicago truncatula
MELO3C022588.2 Cucumis melo
Migut.G00142 Erythranthe guttata
Migut.O00766 Erythranthe guttata
MSTRG.10105 Avicennia marina
MSTRG.3902 Avicennia marina
Nitab4.5_0000070g0130 Nicotiana tabacum
Nitab4.5_0000570g0220 Nicotiana tabacum
Nitab4.5_0001233g0040 Nicotiana tabacum
Nitab4.5_0002761g0030 Nicotiana tabacum
Nitab4.5_0003466g0060 Nicotiana tabacum
Nitab4.5_0004498g0030 Nicotiana tabacum
Nitab4.5_0006144g0060 Nicotiana tabacum
Nitab4.5_0008355g0030 Nicotiana tabacum
Nitab4.5_0008504g0040 Nicotiana tabacum
Nn4g26485 Nelumbo nucifera
Nn6g34952 Nelumbo nucifera
Oeu006406.2 Olea europaea
Oeu035683.2 Olea europaea
Os12g0176800 Oryza sativa ssp. japonica
Os12g0607100 Oryza sativa ssp. japonica
Peaxi162Scf00003g00312 Petunia axillaris
Peaxi162Scf00246g01115 Petunia axillaris
Peaxi162Scf00516g00042 Petunia axillaris
Peaxi162Scf00646g00319 Petunia axillaris
PGR031G1647 Punica granatum
PGSC0003DMG400004704 Solanum tuberosum
PGSC0003DMG400008801 Solanum tuberosum
PGSC0003DMG400011315 Solanum tuberosum
PGSC0003DMG400023536 Solanum tuberosum
Phvul.005G057300 Phaseolus vulgaris
Phvul.005G161500 Phaseolus vulgaris
Phvul.005G161600 Phaseolus vulgaris
Potri.001G129100 Populus trichocarpa
Potri.003G104900 Populus trichocarpa
Pp3c11_18690 Physcomitrium patens
Pp3c7_5020 Physcomitrium patens
PRCOL_00006303 Prasinoderma coloniale
Prupe.1G133900 Prunus persica
Prupe.5G215100 Prunus persica
Prupe.5G215200 Prunus persica
Psat1g011240 Pisum sativum
Psat5g236160 Pisum sativum
PSO210G4235 Papaver somniferum
PSO832G3445 Papaver somniferum
QL06p009651 Quercus lobata
RcHm_v2.0_Chr2g0138081 Rosa chinensis
RcHm_v2.0_Chr2g0138091 Rosa chinensis
RcHm_v2.0_Chr3g0454951 Rosa chinensis
RcHm_v2.0_Chr4g0422871 Rosa chinensis
RcHm_v2.0_Chr4g0422891 Rosa chinensis
RcHm_v2.0_Chr6g0259911 Rosa chinensis
RcHm_v2.0_Chr6g0259921 Rosa chinensis
Rhsim02G0008200 Rhododendron simsii
Sabra01G0099200 Salix brachista
Sc08g0008310 Simmondsia chinensis
Sc18g0001830 Simmondsia chinensis
Sed0002672 Sechium edule
SEGI_03982 Sequoiadendron giganteum
SEGI_30302 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22615 Striga asiatica
SHI30129 Sapria himalayana
SMO134G0097 Selaginella moellendorffii
Solyc01g066690.3 Solanum lycopersicum
Solyc05g054310.4 Solanum lycopersicum
Solyc12g099470.2 Solanum lycopersicum
Sopen01g028310 Solanum pennellii
Sopen05g032780 Solanum pennellii
Sopen12g034140 Solanum pennellii
Sp1g02990 Schrenkiella parvula
TAR365G1161 Trochodendron aralioides
TAR636G0937 Trochodendron aralioides
THA.LOC104801115 Tarenaya hassleriana
THA.LOC104826057 Tarenaya hassleriana
Thecc.04G286800 Theobroma cacao
Thecc.08G121600 Theobroma cacao
Thhalv10000157m.g Eutrema salsugineum
Thhalv10007562m.g Eutrema salsugineum
Thhalv10023030m.g Eutrema salsugineum
TPR.G16035 Trifolium pratense
TPR.G32062 Trifolium pratense
TPR.G9753 Trifolium pratense
TWI09G1432 Tripterygium wilfordii
TWI73G0860 Tripterygium wilfordii
unitig_0.g2591 Utricularia gibba
vmacro09454 Vaccinium macrocarpon
vmacro09457 Vaccinium macrocarpon
vmacro09459 Vaccinium macrocarpon
vmacro15224 Vaccinium macrocarpon
VMungo0540G1477 Vigna mungo
Zm00001eb107110 Zea mays
Zm00001eb324510 Zea mays

User provided reference genes

Program Settings