Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34870 Brassica napus
A06p41660 Brassica napus
Aa31LG2G5690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1725 Anthoceros agrestis
Actinidia03073 Actinidia chinensis
Actinidia18322 Actinidia chinensis
Actinidia25538 Actinidia chinensis
Actinidia36236 Actinidia chinensis
Ah.03g148330 Amaranthus hybridus
Ah.11g046530 Amaranthus hybridus
AL5G15870 Arabidopsis lyrata
AL7G48440 Arabidopsis lyrata
Aqoxy5G03221 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18FPP0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7VWR4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B6N7K9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MH3BZ3 Arachis hypogaea
AT3G26890 Arabidopsis thaliana
AT5G41110 Arabidopsis thaliana
ATR0582G283 Amborella trichopoda
Atru.chr6.1891 Acer truncatum
Atru.chr6.2624 Acer truncatum
AUR62003386 Chenopodium quinoa
AUR62029444 Chenopodium quinoa
AUR62029533 Chenopodium quinoa
AUR62034791 Chenopodium quinoa
BcaB07g30203 Brassica carinata
BcaC03g17400 Brassica carinata
BcaC06g31039 Brassica carinata
BcaC06g33879 Brassica carinata
BcaC06g33881 Brassica carinata
BolC2t11420H Brassica oleracea
BolC4t26411H Brassica oleracea
BolC7t44113H Brassica oleracea
BraA02t08494Z Brassica rapa
BraA06t27091Z Brassica rapa
C02p53450 Brassica napus
C07p35960 Brassica napus
CAN.G637.62 Capsicum annuum
CANSAT64G1652 Cannabis sativa
CARHR147980 Cardamine hirsuta
CARHR213260 Cardamine hirsuta
Carub.0005s0498 Capsella rubella
Carub.0007s3438 Capsella rubella
Ca_08109_v3 Cicer arietinum L.
Ca_16077_v3 Cicer arietinum L.
CBR_g4115 Chara braunii
CBR_g8659 Chara braunii
Cc04_g09490 Coffea canephora
Cc07_g01120 Coffea canephora
CDE02G0961 Ceratophyllum demersum
CDE05G3294 Ceratophyllum demersum
CDE06G0015 Ceratophyllum demersum
CDE06G1094 Ceratophyllum demersum
Cfa007187 Carpinus fangiana
Cfa027209 Carpinus fangiana
Ciclev10014350m.g Citrus clementina
Ciclev10030778m.g Citrus clementina
CiPaw.03G004000 Carya illinoinensis
CiPaw.04G002700 Carya illinoinensis
ClCG05G013950 Citrullus lanatus
COL.COLO4_13321 Corchorus olitorius
COL.COLO4_16681 Corchorus olitorius
COL.COLO4_29992 Corchorus olitorius
Cpa.g.sc4.124 Carica papaya
Cpa.g.sc70.99 Carica papaya
CsaV3_3G026450 Cucumis sativus L.
CSS0004292 Camellia sinensis var. sinensis
CSS0022023 Camellia sinensis var. sinensis
CSS0022268 Camellia sinensis var. sinensis
CSS0033531 Camellia sinensis var. sinensis
CSS0040616 Camellia sinensis var. sinensis
CSS0047716 Camellia sinensis var. sinensis
CSS0048135 Camellia sinensis var. sinensis
DCAR_007513 Daucus carota
DCAR_014485 Daucus carota
DCAR_026255 Daucus carota
Dinv23195 Davidia involucrata
Dinv33300 Davidia involucrata
Duzib147G0161 Durio zibethinus
Duzib205G0494 Durio zibethinus
Duzib264G1039 Durio zibethinus
ECA232G4301 Erigeron canadensis
ECA238G4403 Erigeron canadensis
EL10Ac6g15460 Beta vulgaris
EL10Ac6g15462 Beta vulgaris
Eucgr.H03363 Eucalyptus grandis
Eucgr.K02203 Eucalyptus grandis
FAN02G0330 Fragaria x ananassa
FAN02G1293 Fragaria x ananassa
FAN02G4456 Fragaria x ananassa
FAN08G2795 Fragaria x ananassa
FAN09G1637 Fragaria x ananassa
FAN13G0170 Fragaria x ananassa
FAN14G1398 Fragaria x ananassa
FAN18G2382 Fragaria x ananassa
FAN21G1181 Fragaria x ananassa
FAN25G2251 Fragaria x ananassa
FvH4_3g02970 Fragaria vesca
FvH4_5g09080 Fragaria vesca
FvH4_6g54040 Fragaria vesca
Glyma.04G199400 Glycine max
Glyma.06G166100 Glycine max
Glyma.16G051500 Glycine max
Glyma.19G097300 Glycine max
Gohir.A03G054900 Gossypium hirsutum
Gohir.A05G335100 Gossypium hirsutum
Gohir.A07G231200 Gossypium hirsutum
Gohir.D03G112000 Gossypium hirsutum
Gohir.D04G073900 Gossypium hirsutum
Gohir.D07G238450 Gossypium hirsutum
Gorai.001G274300 Gossypium raimondii
Gorai.003G118300 Gossypium raimondii
Gorai.012G083300 Gossypium raimondii
GSVIVG01008617001 Vitis vinifera
GSVIVG01033027001 Vitis vinifera
HanXRQChr09g0273621 Helianthus annuus
HanXRQChr14g0451301 Helianthus annuus
Haze_07124 Corylus avellana
Haze_14921 Corylus avellana
Hma1.2p1_0168F.1_g074180 Hydrangea macrophylla
HPP92_003183 Vanilla planifolia
HPP92_006986 Vanilla planifolia
Hund02481 Selenicereus undatus
Hund04251 Selenicereus undatus
Hund10075 Selenicereus undatus
Lalb_Chr11g0069321 Lupinus albus
Lalb_Chr14g0363821 Lupinus albus
Lalb_Chr22g0360111 Lupinus albus
Lj1g0002944 Lotus japonicus
Lj1g0012367 Lotus japonicus
Lj2P1038T36 Lonicera japonica
Lj3A541T21 Lonicera japonica
Lj7A614T39 Lonicera japonica
Lj8A617T9 Lonicera japonica
Lj9A199T13 Lonicera japonica
Lj9A484T60 Lonicera japonica
Lsat_1_v5_gn_2_94621 Lactuca sativa
Lsat_1_v5_gn_4_83620 Lactuca sativa
Manes.04G090400 Manihot esculenta
Manes.06G124400 Manihot esculenta
Manes.11G079500 Manihot esculenta
Manes.14G047000 Manihot esculenta
Mapoly0092s0020 Marchantia polymorpha
MD06G1134000 Malus domestica
MD09G1006000 Malus domestica
MD14G1150300 Malus domestica
MD17G1010000 Malus domestica
Medtr3g098740 Medicago truncatula
Medtr7g083230 Medicago truncatula
MELO3C014939.2 Cucumis melo
Migut.D01301 Erythranthe guttata
Migut.F00028 Erythranthe guttata
MSTRG.9345 Avicennia marina
Nitab4.5_0001451g0030 Nicotiana tabacum
Nitab4.5_0001825g0020 Nicotiana tabacum
Nn1g09960 Nelumbo nucifera
Nn3g16339 Nelumbo nucifera
Nn4g22202 Nelumbo nucifera
Nn4g24973 Nelumbo nucifera
Oeu020406.4 Olea europaea
Oeu058112.1 Olea europaea
Os08g0536100 Oryza sativa ssp. japonica
Os09g0509400 Oryza sativa ssp. japonica
Peaxi162Scf00171g01126 Petunia axillaris
PGR083G2252 Punica granatum
PGSC0003DMG400012026 Solanum tuberosum
Phvul.001G088000 Phaseolus vulgaris
Phvul.009G163600 Phaseolus vulgaris
Potri.001G324700 Populus trichocarpa
Potri.012G104200 Populus trichocarpa
Potri.015G103500 Populus trichocarpa
Pp3c12_220 Physcomitrium patens
Pp3c17_330 Physcomitrium patens
Prupe.3G311000 Prunus persica
Prupe.5G145000 Prunus persica
Psat3g095960 Pisum sativum
Psat5g053800 Pisum sativum
PSO017G5996 Papaver somniferum
PSO017G6489 Papaver somniferum
PSO478G0665 Papaver somniferum
PSO478G2627 Papaver somniferum
QL02p070408 Quercus lobata
QL10p001113 Quercus lobata
RcHm_v2.0_Chr2g0176221 Rosa chinensis
RcHm_v2.0_Chr7g0189131 Rosa chinensis
Rhsim08G0194700 Rhododendron simsii
Rhsim10G0002900 Rhododendron simsii
Sabra12G0076600 Salix brachista
Sabra15G0123000 Salix brachista
Sabra16G0207200 Salix brachista
SalBow1G1963 Salvia bowleyana
SalBow4G1297 Salvia bowleyana
SalBow4G3069 Salvia bowleyana
Sc03g0005900 Simmondsia chinensis
Sc04g0000340 Simmondsia chinensis
Sc10g0010700 Simmondsia chinensis
Sc10g0010790 Simmondsia chinensis
Sed0004289 Sechium edule
Sed0017891 Sechium edule
SEGI_25387 Sequoiadendron giganteum
SGA_v2.0_scaffold253G45161 Striga asiatica
SGA_v2.0_scaffold40G15634 Striga asiatica
SGA_v2.0_scaffold74G24707 Striga asiatica
SMO119G0301 Selaginella moellendorffii
Solyc03g097710.4 Solanum lycopersicum
Sopen03g028460 Solanum pennellii
Sp2g16010 Schrenkiella parvula
Sp7g00790 Schrenkiella parvula
TAR374G0366 Trochodendron aralioides
TAR622G1079 Trochodendron aralioides
TAR629G0927 Trochodendron aralioides
THA.LOC104805314 Tarenaya hassleriana
THA.LOC104823991 Tarenaya hassleriana
THA.LOC104825647 Tarenaya hassleriana
Thecc.03G137100 Theobroma cacao
Thecc.04G043100 Theobroma cacao
Thhalv10003798m.g Eutrema salsugineum
Thhalv10027694m.g Eutrema salsugineum
TPR.G21110 Trifolium pratense
TPR.G21585 Trifolium pratense
TWI34G0377 Tripterygium wilfordii
TWI60G0718 Tripterygium wilfordii
unitig_0.g1259 Utricularia gibba
unitig_61.g26380 Utricularia gibba
vmacro05986 Vaccinium macrocarpon
vmacro19156 Vaccinium macrocarpon
VMungo1309G2135 Vigna mungo
Zm00001eb036950 Zea mays
Zm00001eb280240 Zea mays
Zm00001eb317930 Zea mays

User provided reference genes

Program Settings