Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p06200 Brassica napus
A08p09770 Brassica napus
A08p09790 Brassica napus
Aa31LG8G11790 Aethionema arabicum
Aa31sc551G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1615 Anthoceros agrestis
Actinidia27567 Actinidia chinensis
Actinidia29343 Actinidia chinensis
Actinidia30202 Actinidia chinensis
AL3G43810 Arabidopsis lyrata
Aqoxy7G01079 Aquilegia oxysepala
AT2G06520 Arabidopsis thaliana
ATR0598G170 Amborella trichopoda
Atru.chr7.1668 Acer truncatum
Atru.chr7.1862 Acer truncatum
AUR62011238 Chenopodium quinoa
AUR62019996 Chenopodium quinoa
BcaB04g18029 Brassica carinata
BcaB04g18033 Brassica carinata
BcaB04g18036 Brassica carinata
BcaC06g35977 Brassica carinata
BcaC07g37656 Brassica carinata
BcaC07g37657 Brassica carinata
BcaC07g37658 Brassica carinata
BcaC07g37659 Brassica carinata
BolC7t41344H Brassica oleracea
BolC8t48031H Brassica oleracea
BolC8t48032H Brassica oleracea
BraA07t28418Z Brassica rapa
BraA08t32972Z Brassica rapa
BraA08t32973Z Brassica rapa
C07p09260 Brassica napus
CAN.G148.15 Capsicum annuum
CAN.G1963.10 Capsicum annuum
CAN.G1963.8 Capsicum annuum
CAN.G1963.9 Capsicum annuum
CAN.G2920.1 Capsicum annuum
CANSAT25G1066 Cannabis sativa
CANSAT56G3103 Cannabis sativa
CARHR103840 Cardamine hirsuta
CARHR217560 Cardamine hirsuta
Carub.0003s2728 Capsella rubella
Ca_13350_v3 Cicer arietinum L.
Ca_21309_v3 Cicer arietinum L.
CBR_g37553 Chara braunii
Cc06_g11950 Coffea canephora
Cc08_g01300 Coffea canephora
CDE06G0792 Ceratophyllum demersum
CDE06G2477 Ceratophyllum demersum
Cfa003027 Carpinus fangiana
Cfa016825 Carpinus fangiana
Ciclev10009914m.g Citrus clementina
Ciclev10009915m.g Citrus clementina
CiPaw.03G209700 Carya illinoinensis
CiPaw.04G145400 Carya illinoinensis
ClCG03G015240 Citrullus lanatus
ClCG11G001540 Citrullus lanatus
COL.COLO4_18127 Corchorus olitorius
COL.COLO4_21123 Corchorus olitorius
COL.COLO4_33925 Corchorus olitorius
Cpa.g.sc28.79 Carica papaya
CsaV3_1G040810 Cucumis sativus L.
CsaV3_2G001270 Cucumis sativus L.
CSS0010961 Camellia sinensis var. sinensis
CSS0044489 Camellia sinensis var. sinensis
DCAR_004383 Daucus carota
DCAR_024731 Daucus carota
DCAR_028289 Daucus carota
Dinv41836 Davidia involucrata
Duzib150G0054 Durio zibethinus
Duzib150G1210 Durio zibethinus
Duzib168G0620 Durio zibethinus
Duzib187G0719 Durio zibethinus
ECA240G1904 Erigeron canadensis
EL10Ac8g18801 Beta vulgaris
Eucgr.C00835 Eucalyptus grandis
FAN15G0487 Fragaria x ananassa
FAN19G3048 Fragaria x ananassa
FAN20G1073 Fragaria x ananassa
FAN23G0517 Fragaria x ananassa
FAN24G1297 Fragaria x ananassa
FAN26G2792 Fragaria x ananassa
FvH4_1g08270 Fragaria vesca
FvH4_2g31210 Fragaria vesca
Glyma.04G055300 Glycine max
Glyma.06G055500 Glycine max
Glyma.09G067700 Glycine max
Glyma.09G073900 Glycine max
Glyma.15G174200 Glycine max
Gohir.A05G032800 Gossypium hirsutum
Gohir.A07G014066 Gossypium hirsutum
Gohir.A13G191700 Gossypium hirsutum
Gohir.A13G191800 Gossypium hirsutum
Gohir.A13G191900 Gossypium hirsutum
Gohir.D05G034200 Gossypium hirsutum
Gohir.D07G013766 Gossypium hirsutum
Gohir.D13G197100 Gossypium hirsutum
Gohir.D13G197200 Gossypium hirsutum
Gohir.D13G197300 Gossypium hirsutum
Gorai.001G014500 Gossypium raimondii
Gorai.009G034600 Gossypium raimondii
Gorai.013G225800 Gossypium raimondii
Gorai.013G225900 Gossypium raimondii
Gorai.013G226000 Gossypium raimondii
GSVIVG01035449001 Vitis vinifera
HanXRQChr03g0060121 Helianthus annuus
HanXRQChr09g0238011 Helianthus annuus
Haze_18118 Corylus avellana
Haze_25974 Corylus avellana
Hma1.2p1_0231F.1_g097430 Hydrangea macrophylla
Hma1.2p1_0797F.1_g219450 Hydrangea macrophylla
HPP92_004373 Vanilla planifolia
Lalb_Chr08g0232501 Lupinus albus
Lalb_Chr11g0074321 Lupinus albus
Lalb_Chr14g0375551 Lupinus albus
Lalb_Chr23g0267961 Lupinus albus
Lj1g0021647 Lotus japonicus
Lj4g0025815 Lotus japonicus
Lj6g0013057 Lotus japonicus
Lsat_1_v5_gn_7_34960 Lactuca sativa
Manes.03G038500 Manihot esculenta
Manes.16G084500 Manihot esculenta
Manes.16G097300 Manihot esculenta
Mapoly0091s0009 Marchantia polymorpha
MBI04_g42647_MAGBIO Magnolia biondii
MBI13_g11356_MAGBIO Magnolia biondii
MBI19_g11846_MAGBIO Magnolia biondii
MCO14G374 Micromonas commoda
MD02G1087100 Malus domestica
MD08G1070100 Malus domestica
MD15G1214700 Malus domestica
Medtr1g015290 Medicago truncatula
Medtr2g041260 Medicago truncatula
Medtr3g104950 Medicago truncatula
Medtr4g125600 Medicago truncatula
MELO3C004642.2 Cucumis melo
MELO3C015509.2 Cucumis melo
Migut.J00948 Erythranthe guttata
Migut.L01545 Erythranthe guttata
Nitab4.5_0000024g0130 Nicotiana tabacum
Nitab4.5_0000073g0060 Nicotiana tabacum
Nitab4.5_0001866g0030 Nicotiana tabacum
Nitab4.5_0004953g0010 Nicotiana tabacum
Nitab4.5_0006563g0030 Nicotiana tabacum
Nitab4.5_0009678g0020 Nicotiana tabacum
Nn6g35596 Nelumbo nucifera
Oeu002853.1 Olea europaea
Oeu047079.2 Olea europaea
Oeu049524.1 Olea europaea
Os03g0343900 Oryza sativa ssp. japonica
Os07g0673550 Oryza sativa ssp. japonica
Peaxi162Scf00101g00142 Petunia axillaris
Peaxi162Scf00724g00052 Petunia axillaris
Peaxi162Scf00928g00002 Petunia axillaris
PGR044G0308 Punica granatum
PGSC0003DMG400000325 Solanum tuberosum
PGSC0003DMG400000326 Solanum tuberosum
PGSC0003DMG400000327 Solanum tuberosum
PGSC0003DMG400042093 Solanum tuberosum
Phvul.001G039200 Phaseolus vulgaris
Phvul.003G132500 Phaseolus vulgaris
Phvul.009G081400 Phaseolus vulgaris
Phvul.009G228600 Phaseolus vulgaris
Potri.006G144000 Populus trichocarpa
Potri.006G222300 Populus trichocarpa
Potri.018G065200 Populus trichocarpa
Pp3c11_23670 Physcomitrium patens
Pp3c1_32200 Physcomitrium patens
Pp3c5_17290 Physcomitrium patens
Pp3c6_15360 Physcomitrium patens
Prupe.1G406000 Prunus persica
Prupe.7G202600 Prunus persica
Psat0s2363g0200 Pisum sativum
Psat4g017200 Pisum sativum
Psat6g022440 Pisum sativum
PSO063G5907 Papaver somniferum
PSO210G0170 Papaver somniferum
PSO210G5759 Papaver somniferum
PSO421G0229 Papaver somniferum
QL02p000175 Quercus lobata
QL02p061035 Quercus lobata
RcHm_v2.0_Chr2g0094341 Rosa chinensis
RcHm_v2.0_Chr6g0311601 Rosa chinensis
Rhsim03G0229800 Rhododendron simsii
Sabra06G0112700 Salix brachista
Sabra06G0114000 Salix brachista
Sabra18G0058000 Salix brachista
SalBow1G0754 Salvia bowleyana
SalBow6G1222 Salvia bowleyana
Sc12g0010540 Simmondsia chinensis
Sed0013299 Sechium edule
Sed0021203 Sechium edule
Sed0026907 Sechium edule
SEGI_05723 Sequoiadendron giganteum
SEGI_06988 Sequoiadendron giganteum
SGA_v2.0_scaffold64G21862 Striga asiatica
SGA_v2.0_scaffold91G28085 Striga asiatica
SGA_v2.0_scaffold97G29146 Striga asiatica
Solyc05g025600.1 Solanum lycopersicum
Solyc12g150101.1 Solanum lycopersicum
Sopen05g020200 Solanum pennellii
Sopen12g004000 Solanum pennellii
Sopen12g004010 Solanum pennellii
Sopen12g004020 Solanum pennellii
Sp3g24720 Schrenkiella parvula
TAR383G1086 Trochodendron aralioides
TAR624G0082 Trochodendron aralioides
TAR626G0835 Trochodendron aralioides
TAR636G3144 Trochodendron aralioides
THA.LOC104808897 Tarenaya hassleriana
Thecc.09G061600 Theobroma cacao
Thecc.09G080600 Theobroma cacao
Thhalv10002124m.g Eutrema salsugineum
Thhalv10002862m.g Eutrema salsugineum
Thhalv10003467m.g Eutrema salsugineum
TPR.G10915 Trifolium pratense
TPR.G34389 Trifolium pratense
TPR.G3573 Trifolium pratense
TPR.G38854 Trifolium pratense
TPR.G9447 Trifolium pratense
TWI31G0942 Tripterygium wilfordii
TWI32G0186 Tripterygium wilfordii
TWI34G0614 Tripterygium wilfordii
TWI63G0733 Tripterygium wilfordii
unitig_0.g2736 Utricularia gibba
unitig_748.g7144 Utricularia gibba
unitig_748.g7535 Utricularia gibba
VMungo0647G2047 Vigna mungo
VMungo1215G1585 Vigna mungo
VMungo1309G0953 Vigna mungo
Zm00001eb330460 Zea mays
Zm00001eb336410 Zea mays

User provided reference genes

Program Settings