Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40690 Brassica napus
A05p36630 Brassica napus
A10p13340 Brassica napus
Aa31LG3G12030 Aethionema arabicum
Aa31LG8G110 Aethionema arabicum
Actinidia07368 Actinidia chinensis
Actinidia14217 Actinidia chinensis
Ah.12g063900 Amaranthus hybridus
Ah.16g106440 Amaranthus hybridus
AL3G24540 Arabidopsis lyrata
AL8G31750 Arabidopsis lyrata
Aqoxy1G01476 Aquilegia oxysepala
Aqoxy6G02814 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YA2DE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7G0ZI Arachis hypogaea
AT3G12870 Arabidopsis thaliana
AT5G56120 Arabidopsis thaliana
ATR0053G034 Amborella trichopoda
ATR0763G105 Amborella trichopoda
Atru.BG.175.p Acer truncatum
Atru.chr2.3783 Acer truncatum
AUR62024871 Chenopodium quinoa
AUR62026777 Chenopodium quinoa
AUR62030677 Chenopodium quinoa
BcaB04g18034 Brassica carinata
BcaB04g21042 Brassica carinata
BcaB06g25505 Brassica carinata
BcaB08g35977 Brassica carinata
BcaC04g20140 Brassica carinata
BcaC05g29231 Brassica carinata
BcaC09g48267 Brassica carinata
BolC1t05175H Brassica oleracea
BolC5t34174H Brassica oleracea
BolC9t57584H Brassica oleracea
BraA01t04103Z Brassica rapa
BraA05t22467Z Brassica rapa
BraA10t43435Z Brassica rapa
C01p52320 Brassica napus
C05p55060 Brassica napus
C09p47270 Brassica napus
CAN.G623.65 Capsicum annuum
CANSAT11G1295 Cannabis sativa
CANSAT80G1447 Cannabis sativa
CARHR087390 Cardamine hirsuta
CARHR269500 Cardamine hirsuta
Carub.0003s1223 Capsella rubella
Carub.0008s1644 Capsella rubella
Ca_00875_v3 Cicer arietinum L.
Ca_14869_v3 Cicer arietinum L.
Ca_29620_v3 Cicer arietinum L.
Cc00_g21090 Coffea canephora
Cc05_g15590 Coffea canephora
Cfa010899 Carpinus fangiana
Cfa010900 Carpinus fangiana
Cfa018546 Carpinus fangiana
Cfa019003 Carpinus fangiana
Cfa020466 Carpinus fangiana
Ciclev10005912m.g Citrus clementina
Ciclev10009431m.g Citrus clementina
CiPaw.11G063400 Carya illinoinensis
CiPaw.12G142200 Carya illinoinensis
ClCG09G022620 Citrullus lanatus
ClCG10G004550 Citrullus lanatus
COL.COLO4_07779 Corchorus olitorius
COL.COLO4_38362 Corchorus olitorius
Cpa.g.c29671.3 Carica papaya
Cpa.g.sc12.79 Carica papaya
CsaV3_3G004370 Cucumis sativus L.
CsaV3_7G022780 Cucumis sativus L.
CSS0037695 Camellia sinensis var. sinensis
CSS0042760 Camellia sinensis var. sinensis
CSS0042932 Camellia sinensis var. sinensis
CSS0049951 Camellia sinensis var. sinensis
DCAR_019925 Daucus carota
Dinv19602 Davidia involucrata
Dinv19651 Davidia involucrata
Dinv40901 Davidia involucrata
Duzib213G0028 Durio zibethinus
Duzib213G0090 Durio zibethinus
ECA246G1107 Erigeron canadensis
EL10Ac2g03280 Beta vulgaris
Eucgr.F02000 Eucalyptus grandis
Eucgr.F04302 Eucalyptus grandis
Eucgr.F04429 Eucalyptus grandis
FAN11G0046 Fragaria x ananassa
FAN11G0932 Fragaria x ananassa
FAN16G1675 Fragaria x ananassa
FAN16G2402 Fragaria x ananassa
FAN21G2136 Fragaria x ananassa
FAN21G2350 Fragaria x ananassa
FAN25G0015 Fragaria x ananassa
FAN25G2501 Fragaria x ananassa
FvH4_3g15460 Fragaria vesca
FvH4_3g41800 Fragaria vesca
Glyma.04G098800 Glycine max
Glyma.06G100500 Glycine max
Glyma.08G336300 Glycine max
Glyma.18G071400 Glycine max
Gohir.A01G096300 Gossypium hirsutum
Gohir.A04G001800 Gossypium hirsutum
Gohir.D01G080600 Gossypium hirsutum
Gohir.D05G387600 Gossypium hirsutum
Gorai.002G105300 Gossypium raimondii
Gorai.009G454200 Gossypium raimondii
HanXRQChr05g0160161 Helianthus annuus
HanXRQChr11g0335081 Helianthus annuus
HanXRQChr13g0390521 Helianthus annuus
HanXRQChr14g0431341 Helianthus annuus
Haze_09906 Corylus avellana
Haze_20100 Corylus avellana
Haze_20101 Corylus avellana
Hma1.2p1_0151F.1_g067530 Hydrangea macrophylla
Hma1.2p1_0321F.1_g124220 Hydrangea macrophylla
HPP92_000947 Vanilla planifolia
HPP92_017987 Vanilla planifolia
HPP92_026703 Vanilla planifolia
Lalb_Chr03g0031721 Lupinus albus
Lalb_Chr15g0082511 Lupinus albus
Lalb_Chr19g0133331 Lupinus albus
Lalb_Chr25g0284811 Lupinus albus
Lj1P909T68 Lonicera japonica
Lj3g0018587 Lotus japonicus
Lj6g0000831 Lotus japonicus
Lj8P182T56 Lonicera japonica
Lsat_1_v5_gn_2_120921 Lactuca sativa
Lsat_1_v5_gn_4_112101 Lactuca sativa
Lsat_1_v5_gn_4_69380 Lactuca sativa
Lsat_1_v5_gn_7_116241 Lactuca sativa
Manes.01G005512 Manihot esculenta
Manes.05G205500 Manihot esculenta
Manes.15G015100 Manihot esculenta
Manes.17G045900 Manihot esculenta
MBI02_g00520_MAGBIO Magnolia biondii
MBI14_g12725_MAGBIO Magnolia biondii
MBI14_g43562_MAGBIO Magnolia biondii
MBI15_g37117_MAGBIO Magnolia biondii
MD01G1075700 Malus domestica
MD05G1223200 Malus domestica
MD10G1204600 Malus domestica
MD12G1131000 Malus domestica
Medtr3g461540 Medicago truncatula
Medtr8g445730 Medicago truncatula
MELO3C012619.2 Cucumis melo
MELO3C014130.2 Cucumis melo
Migut.H01679 Erythranthe guttata
Migut.M01590 Erythranthe guttata
MSTRG.14551 Avicennia marina
MSTRG.15825 Avicennia marina
Nitab4.5_0001303g0030 Nicotiana tabacum
Nitab4.5_0002321g0020 Nicotiana tabacum
Nitab4.5_0002633g0040 Nicotiana tabacum
Nitab4.5_0009087g0060 Nicotiana tabacum
Nn1g07663 Nelumbo nucifera
Nn7g37912 Nelumbo nucifera
Oeu002798.1 Olea europaea
Oeu013012.1 Olea europaea
Oeu034059.1 Olea europaea
Os03g0778400 Oryza sativa ssp. japonica
Os08g0496400 Oryza sativa ssp. japonica
Os08g0496600 Oryza sativa ssp. japonica
Peaxi162Scf00452g00614 Petunia axillaris
PGR031G3508 Punica granatum
PGR083G0197 Punica granatum
PGSC0003DMG400022234 Solanum tuberosum
PGSC0003DMG400046514 Solanum tuberosum
Phvul.006G061800 Phaseolus vulgaris
Phvul.009G033300 Phaseolus vulgaris
Potri.001G470800 Populus trichocarpa
Potri.005G096100 Populus trichocarpa
Potri.011G167900 Populus trichocarpa
Prupe.4G137100 Prunus persica
Prupe.6G033100 Prunus persica
Psat4g176920 Pisum sativum
Psat5g164040 Pisum sativum
PSO170G3509 Papaver somniferum
PSO478G3370 Papaver somniferum
PSO528G0254 Papaver somniferum
PSO541G5304 Papaver somniferum
PSO675G7699 Papaver somniferum
QL04p077258 Quercus lobata
QL08p000737 Quercus lobata
RcHm_v2.0_Chr5g0025961 Rosa chinensis
RcHm_v2.0_Chr5g0074881 Rosa chinensis
Rhsim06G0234400 Rhododendron simsii
Rhsim06G0240500 Rhododendron simsii
Sabra05G0079100 Salix brachista
Sabra11G0138600 Salix brachista
Sabra16G0319400 Salix brachista
SalBow8G2246 Salvia bowleyana
SalBow8G4530 Salvia bowleyana
Sed0002257 Sechium edule
Sed0011072 Sechium edule
Sed0019904 Sechium edule
Sed0021245 Sechium edule
SEGI_11847 Sequoiadendron giganteum
SEGI_22110 Sequoiadendron giganteum
SEGI_34145 Sequoiadendron giganteum
SEGI_34566 Sequoiadendron giganteum
SEGI_38004 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40235 Striga asiatica
SGA_v2.0_scaffold239G44041 Striga asiatica
SGA_v2.0_scaffold7G03599 Striga asiatica
SHI21411 Sapria himalayana
SHI32912 Sapria himalayana
Solyc07g066040.1 Solanum lycopersicum
Solyc07g066540.1 Solanum lycopersicum
Sopen07g034230 Solanum pennellii
Sopen07g034700 Solanum pennellii
Sp3g11010 Schrenkiella parvula
Sp6g17970 Schrenkiella parvula
TAR627G0527 Trochodendron aralioides
THA.LOC104810266 Tarenaya hassleriana
THA.LOC104811695 Tarenaya hassleriana
Thecc.07G003000 Theobroma cacao
Thecc.07G160900 Theobroma cacao
Thhalv10014555m.g Eutrema salsugineum
Thhalv10021525m.g Eutrema salsugineum
TPR.G14730 Trifolium pratense
TPR.G28745 Trifolium pratense
TWI38G0569 Tripterygium wilfordii
TWI38G1586 Tripterygium wilfordii
TWI38G2168 Tripterygium wilfordii
TWI39G0520 Tripterygium wilfordii
vmacro11714 Vaccinium macrocarpon
VMungo0540G2097 Vigna mungo
VMungo1309G0555 Vigna mungo
Zm00001eb033920 Zea mays
Zm00001eb057330 Zea mays
Zm00001eb059720 Zea mays
Zm00001eb059740 Zea mays
Zm00001eb133160 Zea mays
Zm00001eb213650 Zea mays

User provided reference genes

Program Settings