Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21820 Brassica napus
Aa31LG5G20660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2558 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2872 Anthoceros agrestis
Actinidia22443 Actinidia chinensis
AL4G36330 Arabidopsis lyrata
AL4G36340 Arabidopsis lyrata
AL92U10030 Arabidopsis lyrata
AL92U10040 Arabidopsis lyrata
Aqoxy1G01189 Aquilegia oxysepala
AT2G39020 Arabidopsis thaliana
AT2G39030 Arabidopsis thaliana
ATR0680G063 Amborella trichopoda
ATR1149G016 Amborella trichopoda
Atru.chr12.812 Acer truncatum
Atru.chr12.813 Acer truncatum
AUR62012284 Chenopodium quinoa
AUR62022924 Chenopodium quinoa
AUR62030580 Chenopodium quinoa
BcaB01g03642 Brassica carinata
BcaC01g05491 Brassica carinata
BolC3t14973H Brassica oleracea
BraA03t11418Z Brassica rapa
C03p25890 Brassica napus
CAN.G1609.10 Capsicum annuum
CAN.G21.46 Capsicum annuum
CAN.G273.16 Capsicum annuum
CAN.G273.28 Capsicum annuum
CAN.G559.6 Capsicum annuum
CAN.G566.24 Capsicum annuum
CAN.G688.8 Capsicum annuum
CAN.G78.9 Capsicum annuum
CANSAT35G1379 Cannabis sativa
CANSAT56G0472 Cannabis sativa
CARHR133810 Cardamine hirsuta
Carub.0004s2106 Capsella rubella
Carub.0004s2107 Capsella rubella
Carub.0004s2109 Capsella rubella
Carub.0007s3340 Capsella rubella
Ca_03078_v3 Cicer arietinum L.
CBR_g18695 Chara braunii
CBR_g24228 Chara braunii
Cc02_g11190 Coffea canephora
Cc02_g11200 Coffea canephora
CDE02G1397 Ceratophyllum demersum
CDE02G3576 Ceratophyllum demersum
Cfa001668 Carpinus fangiana
Cfa001671 Carpinus fangiana
Cfa027144 Carpinus fangiana
Ciclev10032618m.g Citrus clementina
CiPaw.01G271000 Carya illinoinensis
ClCG05G021100 Citrullus lanatus
COL.COLO4_12162 Corchorus olitorius
Cpa.g.c31528 Carica papaya
Cpa.g.sc53.95 Carica papaya
CsaV3_5G036170 Cucumis sativus L.
CsaV3_5G036180 Cucumis sativus L.
CsaV3_5G036190 Cucumis sativus L.
CSS0000191 Camellia sinensis var. sinensis
CSS0004023 Camellia sinensis var. sinensis
DCAR_006425 Daucus carota
DCAR_006426 Daucus carota
Dinv00190 Davidia involucrata
Dinv36421 Davidia involucrata
Duzib106G0956 Durio zibethinus
ECA233G3034 Erigeron canadensis
EL10Ac2g02683 Beta vulgaris
EL10Ac2g04865 Beta vulgaris
EL10Ac2g04869 Beta vulgaris
EL10Ac2g04876 Beta vulgaris
FAN01G0092 Fragaria x ananassa
FAN03G0700 Fragaria x ananassa
FAN06G3681 Fragaria x ananassa
FAN06G4372 Fragaria x ananassa
FAN10G0478 Fragaria x ananassa
FAN10G1125 Fragaria x ananassa
FvH4_7g19050 Fragaria vesca
Glyma.02G156700 Glycine max
Glyma.10G109000 Glycine max
Gohir.A05G296300 Gossypium hirsutum
Gohir.D05G296200 Gossypium hirsutum
Gorai.009G313000 Gossypium raimondii
GSVIVG01016243001 Vitis vinifera
HanXRQChr12g0368721 Helianthus annuus
Haze_16863 Corylus avellana
Hma1.2p1_0366F.1_g136880 Hydrangea macrophylla
Hma1.2p1_0366F.1_g136890 Hydrangea macrophylla
HPP92_008436 Vanilla planifolia
HPP92_008462 Vanilla planifolia
HPP92_018616 Vanilla planifolia
HPP92_018617 Vanilla planifolia
HPP92_028019 Vanilla planifolia
HPP92_028020 Vanilla planifolia
Lalb_Chr01g0010461 Lupinus albus
Lalb_Chr19g0129101 Lupinus albus
Lj3P882T56 Lonicera japonica
Lj5g0009305 Lotus japonicus
Lj6g0009968 Lotus japonicus
Lsat_1_v5_gn_8_20401 Lactuca sativa
Manes.07G085800 Manihot esculenta
Manes.07G097400 Manihot esculenta
Manes.07G097500 Manihot esculenta
Manes.10G048200 Manihot esculenta
Mapoly0139s0013 Marchantia polymorpha
Mapoly0179s0017 Marchantia polymorpha
MD01G1105800 Malus domestica
Medtr1g049370 Medicago truncatula
MELO3C012417.2 Cucumis melo
MELO3C012418.2 Cucumis melo
MELO3C012419.2 Cucumis melo
Migut.F01970 Erythranthe guttata
MSTRG.9163 Avicennia marina
MSTRG.9164 Avicennia marina
Nitab4.5_0000052g0120 Nicotiana tabacum
Nitab4.5_0000052g0170 Nicotiana tabacum
Nitab4.5_0000071g0200 Nicotiana tabacum
Nitab4.5_0000264g0170 Nicotiana tabacum
Nitab4.5_0000406g0070 Nicotiana tabacum
Nitab4.5_0000406g0090 Nicotiana tabacum
Nitab4.5_0000838g0150 Nicotiana tabacum
Nitab4.5_0001736g0010 Nicotiana tabacum
Nitab4.5_0003338g0070 Nicotiana tabacum
Nitab4.5_0003338g0090 Nicotiana tabacum
Nitab4.5_0007307g0010 Nicotiana tabacum
Nitab4.5_0007737g0010 Nicotiana tabacum
Nitab4.5_0007737g0020 Nicotiana tabacum
Nitab4.5_0010499g0020 Nicotiana tabacum
Nn2g13743 Nelumbo nucifera
Oeu031329.1 Olea europaea
Os03g0151600 Oryza sativa ssp. japonica
Peaxi162Scf00045g00203 Petunia axillaris
Peaxi162Scf00045g02037 Petunia axillaris
Peaxi162Scf00169g00510 Petunia axillaris
Peaxi162Scf00523g00056 Petunia axillaris
Peaxi162Scf01227g00007 Petunia axillaris
PGR142G2276 Punica granatum
PGSC0003DMG400010832 Solanum tuberosum
PGSC0003DMG400010997 Solanum tuberosum
PGSC0003DMG400014499 Solanum tuberosum
PGSC0003DMG400014770 Solanum tuberosum
PGSC0003DMG400014771 Solanum tuberosum
PGSC0003DMG400014772 Solanum tuberosum
PGSC0003DMG400014773 Solanum tuberosum
PGSC0003DMG400014774 Solanum tuberosum
PGSC0003DMG400014776 Solanum tuberosum
PGSC0003DMG400014777 Solanum tuberosum
PGSC0003DMG400014778 Solanum tuberosum
PGSC0003DMG400026301 Solanum tuberosum
PGSC0003DMG400037933 Solanum tuberosum
Phvul.007G239400 Phaseolus vulgaris
Phvul.007G239500 Phaseolus vulgaris
Phvul.007G240100 Phaseolus vulgaris
Potri.008G037600 Populus trichocarpa
Potri.008G037700 Populus trichocarpa
Potri.010G224800 Populus trichocarpa
Pp3c5_12740 Physcomitrium patens
Pp3c5_12767 Physcomitrium patens
Pp3c5_21790 Physcomitrium patens
Prupe.2G211200 Prunus persica
Psat6g129400 Pisum sativum
PSO063G7402 Papaver somniferum
PSO210G3713 Papaver somniferum
PSO210G6097 Papaver somniferum
PSO339G6169 Papaver somniferum
PSO407G0084 Papaver somniferum
PSO729G0216 Papaver somniferum
QL08p055206 Quercus lobata
QL08p055207 Quercus lobata
QL08p055257 Quercus lobata
QL08p055269 Quercus lobata
QL08p055272 Quercus lobata
RcHm_v2.0_Chr1g0362951 Rosa chinensis
RcHm_v2.0_Chr4g0438191 Rosa chinensis
Rhsim03G0118600 Rhododendron simsii
Sabra08G0025400 Salix brachista
Sabra10G0173800 Salix brachista
SalBow4G0587 Salvia bowleyana
SalBow4G1667 Salvia bowleyana
SalBow4G2042 Salvia bowleyana
SalBow6G2357 Salvia bowleyana
Sc09g0006150 Simmondsia chinensis
Sc09g0006170 Simmondsia chinensis
Sed0001125 Sechium edule
Sed0004049 Sechium edule
Sed0008789 Sechium edule
Sed0014207 Sechium edule
Sed0016707 Sechium edule
SEGI_06691 Sequoiadendron giganteum
SEGI_09913 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21403 Striga asiatica
SHI08927 Sapria himalayana
SMO116G0049 Selaginella moellendorffii
Solyc08g006730.1 Solanum lycopersicum
Solyc08g006765.1 Solanum lycopersicum
Solyc08g068280.2 Solanum lycopersicum
Solyc08g068690.1 Solanum lycopersicum
Solyc08g068700.1 Solanum lycopersicum
Solyc08g068710.1 Solanum lycopersicum
Solyc08g068720.1 Solanum lycopersicum
Solyc08g068730.1 Solanum lycopersicum
Solyc08g068770.3 Solanum lycopersicum
Solyc08g068780.3 Solanum lycopersicum
Solyc08g068790.3 Solanum lycopersicum
Solyc10g084640.1 Solanum lycopersicum
Solyc12g096840.3 Solanum lycopersicum
Sopen08g002670 Solanum pennellii
Sopen08g002710 Solanum pennellii
Sopen08g022440 Solanum pennellii
Sopen08g022450 Solanum pennellii
Sopen08g022460 Solanum pennellii
Sopen08g022490 Solanum pennellii
Sopen08g022500 Solanum pennellii
Sopen08g022510 Solanum pennellii
Sopen08g022520 Solanum pennellii
Sopen10g034080 Solanum pennellii
Sopen12g032670 Solanum pennellii
Sp4g03890 Schrenkiella parvula
Sp4g21380 Schrenkiella parvula
TAR633G0023 Trochodendron aralioides
TAR636G2919 Trochodendron aralioides
THA.LOC104825225 Tarenaya hassleriana
THA.LOC104826902 Tarenaya hassleriana
Thecc.10G077100 Theobroma cacao
Thhalv10017189m.g Eutrema salsugineum
TPR.G13797 Trifolium pratense
TWI38G1556 Tripterygium wilfordii
TWI63G1345 Tripterygium wilfordii
unitig_749.g13572 Utricularia gibba
VMungo0720G2309 Vigna mungo
VMungo0720G2456 Vigna mungo
VMungo1383G2373 Vigna mungo
Zm00001eb004140 Zea mays
Zm00001eb403080 Zea mays

User provided reference genes

Program Settings