Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10810 Brassica napus
A10p11240 Brassica napus
A10p32310 Brassica napus
A10p32320 Brassica napus
Aa31LG3G10080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.412 Anthoceros agrestis
Actinidia09690 Actinidia chinensis
Actinidia11087 Actinidia chinensis
Actinidia11088 Actinidia chinensis
Actinidia13022 Actinidia chinensis
Actinidia18769 Actinidia chinensis
Actinidia35245 Actinidia chinensis
Ah.04g164780 Amaranthus hybridus
AL8G28910 Arabidopsis lyrata
Aqoxy167s001 Aquilegia oxysepala
Aqoxy1G02381 Aquilegia oxysepala
Aqoxy4G00736 Aquilegia oxysepala
Aqoxy4G00995 Aquilegia oxysepala
Aqoxy7G02353 Aquilegia oxysepala
Aqoxy7G03109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CK6KU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQ4NRX Arachis hypogaea
AT5G53850 Arabidopsis thaliana
ATR0737G076 Amborella trichopoda
Atru.chr2.2483 Acer truncatum
AUR62019437 Chenopodium quinoa
AUR62039195 Chenopodium quinoa
BcaB05g22079 Brassica carinata
BcaB08g35744 Brassica carinata
BcaC03g14381 Brassica carinata
BcaC04g20412 Brassica carinata
BcaNung04830 Brassica carinata
BolC2t07923H Brassica oleracea
BolC9t57268H Brassica oleracea
BraA02t06142Z Brassica rapa
BraA10t43217Z Brassica rapa
C02p17920 Brassica napus
C09p43840 Brassica napus
CAN.G1119.24 Capsicum annuum
CAN.G162.50 Capsicum annuum
CANSAT56G4387 Cannabis sativa
CARHR266980 Cardamine hirsuta
Carub.0008s1414 Capsella rubella
Ca_03507_v3 Cicer arietinum L.
CBR_g20444 Chara braunii
Cc03_g12040 Coffea canephora
Cc05_g07360 Coffea canephora
Cc05_g07390 Coffea canephora
Cc05_g11940 Coffea canephora
CDE02G0813 Ceratophyllum demersum
Cfa014633 Carpinus fangiana
Cfa020573 Carpinus fangiana
Cfa022318 Carpinus fangiana
Ciclev10007808m.g Citrus clementina
Ciclev10009308m.g Citrus clementina
CiPaw.11G170500 Carya illinoinensis
CiPaw.12G119100 Carya illinoinensis
ClCG05G009310 Citrullus lanatus
ClCG11G018020 Citrullus lanatus
COL.COLO4_27183 Corchorus olitorius
COL.COLO4_36342 Corchorus olitorius
Cpa.g.sc80.76 Carica papaya
Cpa.g.sc83.52 Carica papaya
Cre01.g016528 Chlamydomonas reinhardtii
CsaV3_3G019470 Cucumis sativus L.
CsaV3_4G033640 Cucumis sativus L.
CSS0011837 Camellia sinensis var. sinensis
CSS0016776 Camellia sinensis var. sinensis
CSS0039562 Camellia sinensis var. sinensis
CSS0041223 Camellia sinensis var. sinensis
CSS0042025 Camellia sinensis var. sinensis
CSS0047160 Camellia sinensis var. sinensis
DCAR_013023 Daucus carota
DCAR_013024 Daucus carota
DCAR_020992 Daucus carota
Dinv13400 Davidia involucrata
Dinv13401 Davidia involucrata
Dinv14925 Davidia involucrata
Dinv20182 Davidia involucrata
Dinv20183 Davidia involucrata
Duzib170G0760 Durio zibethinus
Duzib187G0289 Durio zibethinus
Duzib213G1007 Durio zibethinus
ECA236G4656 Erigeron canadensis
ECA240G3077 Erigeron canadensis
EL10Ac4g08198 Beta vulgaris
EL10Ac9g20906 Beta vulgaris
Eucgr.F01149 Eucalyptus grandis
Eucgr.F03307 Eucalyptus grandis
Eucgr.F03309 Eucalyptus grandis
FAN11G0087 Fragaria x ananassa
FAN16G0300 Fragaria x ananassa
FAN21G2785 Fragaria x ananassa
FAN25G2067 Fragaria x ananassa
FvH4_3g19790 Fragaria vesca
Glyma.06G240100 Glycine max
Glyma.12G153200 Glycine max
Glyma.12G225300 Glycine max
Glyma.13G276000 Glycine max
Gohir.A01G063000 Gossypium hirsutum
Gohir.A02G098700 Gossypium hirsutum
Gohir.A13G146200 Gossypium hirsutum
Gohir.A13G147033 Gossypium hirsutum
Gohir.D01G049400 Gossypium hirsutum
Gohir.D13G151100 Gossypium hirsutum
Gohir.D13G152056 Gossypium hirsutum
Gorai.002G069300 Gossypium raimondii
Gorai.013G169100 Gossypium raimondii
Gorai.013G170700 Gossypium raimondii
GSVIVG01014315001 Vitis vinifera
GSVIVG01020566001 Vitis vinifera
HanXRQChr01g0015321 Helianthus annuus
HanXRQChr05g0153011 Helianthus annuus
HanXRQChr09g0270181 Helianthus annuus
HanXRQChr11g0328541 Helianthus annuus
HanXRQChr12g0364161 Helianthus annuus
Haze_09438 Corylus avellana
Haze_13197 Corylus avellana
Hma1.2p1_0002F.1_g002040 Hydrangea macrophylla
Hma1.2p1_0458F.1_g157030 Hydrangea macrophylla
Hma1.2p1_2752F.1_g327880 Hydrangea macrophylla
Hma1.2p1_2752F.1_g327890 Hydrangea macrophylla
HPP92_020260 Vanilla planifolia
Hund02228 Selenicereus undatus
Lalb_Chr01g0016791 Lupinus albus
Lalb_Chr20g0109591 Lupinus albus
Lalb_Chr20g0109601 Lupinus albus
Lalb_Chr20g0110381 Lupinus albus
Lj3g0001420 Lotus japonicus
Lj3g0007256 Lotus japonicus
Lj8C110T8 Lonicera japonica
Lj8C155G9 Lonicera japonica
Lsat_1_v5_gn_7_104120 Lactuca sativa
Lsat_1_v5_gn_9_97501 Lactuca sativa
Manes.03G109300 Manihot esculenta
Manes.13G144832 Manihot esculenta
Manes.15G087800 Manihot esculenta
Mapoly0003s0138 Marchantia polymorpha
MBI06_g20686_MAGBIO Magnolia biondii
MBI06_g23079_MAGBIO Magnolia biondii
MBI07_g30198_MAGBIO Magnolia biondii
MD03G1229100 Malus domestica
MD11G1249900 Malus domestica
Medtr2g079110 Medicago truncatula
MELO3C016693.2 Cucumis melo
MELO3C019407.2 Cucumis melo
Migut.M00798 Erythranthe guttata
MSTRG.15237 Avicennia marina
MSTRG.6831 Avicennia marina
Nitab4.5_0000207g0070 Nicotiana tabacum
Nitab4.5_0001241g0080 Nicotiana tabacum
Nitab4.5_0001336g0100 Nicotiana tabacum
Nitab4.5_0002383g0020 Nicotiana tabacum
Nn8g39708 Nelumbo nucifera
Oeu024907.2 Olea europaea
Oeu051071.1 Olea europaea
Os01g0101200 Oryza sativa ssp. japonica
Os11g0484000 Oryza sativa ssp. japonica
Peaxi162Scf00027g00211 Petunia axillaris
Peaxi162Scf00069g01630 Petunia axillaris
Peaxi162Scf00350g00612 Petunia axillaris
Peaxi162Scf00441g00320 Petunia axillaris
PGR083G2586 Punica granatum
PGR142G3659 Punica granatum
PGSC0003DMG400012412 Solanum tuberosum
PGSC0003DMG400012414 Solanum tuberosum
PGSC0003DMG400025041 Solanum tuberosum
PGSC0003DMG400045125 Solanum tuberosum
Phvul.005G072900 Phaseolus vulgaris
Potri.001G399000 Populus trichocarpa
Potri.011G118066 Populus trichocarpa
Potri.011G118132 Populus trichocarpa
Pp3c3_4430 Physcomitrium patens
Pp3c4_28740 Physcomitrium patens
Prupe.4G180000 Prunus persica
Psat5g242200 Pisum sativum
PSO541G2422 Papaver somniferum
PSO675G8275 Papaver somniferum
QL08p022191 Quercus lobata
QL08p039561 Quercus lobata
QL08p039572 Quercus lobata
RcHm_v2.0_Chr5g0033201 Rosa chinensis
Rhsim04G0021800 Rhododendron simsii
Rhsim06G0199700 Rhododendron simsii
Sabra11G0103100 Salix brachista
Sabra11G0103200 Salix brachista
Sabra16G0261600 Salix brachista
SalBow3G0650 Salvia bowleyana
SalBow4G1525 Salvia bowleyana
SalBow4G2409 Salvia bowleyana
SalBow7G2893 Salvia bowleyana
Sc16g0007030 Simmondsia chinensis
Sed0005351 Sechium edule
Sed0013988 Sechium edule
SEGI_08533 Sequoiadendron giganteum
SEGI_10776 Sequoiadendron giganteum
SEGI_29603 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24254 Striga asiatica
SHI21529 Sapria himalayana
SHI21536 Sapria himalayana
SMO146G0056 Selaginella moellendorffii
SMO217G0008 Selaginella moellendorffii
SMO217G0013 Selaginella moellendorffii
SMO356G0232 Selaginella moellendorffii
SMO356G0408 Selaginella moellendorffii
SMO356G0458 Selaginella moellendorffii
SMO356G0618 Selaginella moellendorffii
Solyc07g063040.3 Solanum lycopersicum
Solyc07g063060.2 Solanum lycopersicum
Solyc10g007050.3 Solanum lycopersicum
Sopen07g031230 Solanum pennellii
Sopen07g031250 Solanum pennellii
Sopen10g002950 Solanum pennellii
Sp6g15910 Schrenkiella parvula
TAR624G0404 Trochodendron aralioides
TAR624G0879 Trochodendron aralioides
TAR627G0778 Trochodendron aralioides
TAR627G0954 Trochodendron aralioides
THA.LOC104799927 Tarenaya hassleriana
Thecc.02G181900 Theobroma cacao
Thecc.07G091600 Theobroma cacao
Thhalv10013244m.g Eutrema salsugineum
TPR.G7973 Trifolium pratense
TWI14G0888 Tripterygium wilfordii
TWI39G0621 Tripterygium wilfordii
unitig_578.g15672 Utricularia gibba
vmacro09527 Vaccinium macrocarpon
vmacro11871 Vaccinium macrocarpon
VMungo0647G0173 Vigna mungo
VMungo1080G0087 Vigna mungo
VMungo1080G0249 Vigna mungo
Zm00001eb127150 Zea mays
Zm00001eb169620 Zea mays

User provided reference genes

Program Settings