Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p58970 Brassica napus
Aa31LG2G20930 Aethionema arabicum
Aa31LG5G10800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3900 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.992 Anthoceros agrestis
Actinidia05970 Actinidia chinensis
Actinidia14695 Actinidia chinensis
Actinidia25259 Actinidia chinensis
Actinidia26715 Actinidia chinensis
Actinidia29795 Actinidia chinensis
Actinidia39722 Actinidia chinensis
AL234U10020 Arabidopsis lyrata
AL234U10030 Arabidopsis lyrata
AL3G10490 Arabidopsis lyrata
AL5G29470 Arabidopsis lyrata
AL7G22790 Arabidopsis lyrata
AL7G46630 Arabidopsis lyrata
Aqoxy7G01242 Aquilegia oxysepala
Aqoxy7G01255 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DY3U4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KV8E85 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9L9K2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1E5ZU Arachis hypogaea
AT3G01660 Arabidopsis thaliana
AT4G29590 Arabidopsis thaliana
ATR0987G003 Amborella trichopoda
Atru.BG.1.p Acer truncatum
Atru.chr6.2448 Acer truncatum
Atru.chr7.1573 Acer truncatum
BcaC01g00958 Brassica carinata
BcaC05g30419 Brassica carinata
BcaC05g30458 Brassica carinata
BcaNung00480 Brassica carinata
BNapus_Darmor_BZH_scaffold_229p00010 Brassica napus
BolC7t46171H Brassica oleracea
BraA03t14957Z Brassica rapa
BraSC76t46602Z Brassica rapa
C03p86360 Brassica napus
C07p56950 Brassica napus
C07p56990 Brassica napus
C09p75010 Brassica napus
CAN.G473.37 Capsicum annuum
CAN.G52.1 Capsicum annuum
CANSAT64G2949 Cannabis sativa
CARHR075260 Cardamine hirsuta
CARHR237420 Cardamine hirsuta
Carub.0003s0040 Capsella rubella
Carub.0007s1097 Capsella rubella
Ca_25620_v3 Cicer arietinum L.
Ca_26588_v3 Cicer arietinum L.
Ca_27739_v3 Cicer arietinum L.
Ca_27844_v3 Cicer arietinum L.
CBR_g31993 Chara braunii
Cc06_g11270 Coffea canephora
Cc07_g00110 Coffea canephora
CDE02G3492 Ceratophyllum demersum
Cfa003102 Carpinus fangiana
Cfa007324 Carpinus fangiana
Cfa021086 Carpinus fangiana
Ciclev10008994m.g Citrus clementina
Ciclev10016177m.g Citrus clementina
CiPaw.04G030500 Carya illinoinensis
CiPaw.04G151200 Carya illinoinensis
ClCG05G012870 Citrullus lanatus
ClCG11G001810 Citrullus lanatus
COL.COLO4_18214 Corchorus olitorius
COL.COLO4_29193 Corchorus olitorius
Cpa.g.sc130.64 Carica papaya
Cpa.g.sc885.1 Carica papaya
Cre06.g278236 Chlamydomonas reinhardtii
Cre12.g547100 Chlamydomonas reinhardtii
Cre16.g689759 Chlamydomonas reinhardtii
CsaV3_2G001520 Cucumis sativus L.
CsaV3_3G027600 Cucumis sativus L.
CSS0004630 Camellia sinensis var. sinensis
CSS0026876 Camellia sinensis var. sinensis
CSS0033517 Camellia sinensis var. sinensis
CSS0039563 Camellia sinensis var. sinensis
CSS0042365 Camellia sinensis var. sinensis
CSS0046192 Camellia sinensis var. sinensis
DCAR_011269 Daucus carota
DCAR_024683 Daucus carota
DCAR_024684 Daucus carota
Dinv25715 Davidia involucrata
Dinv42310 Davidia involucrata
Duzib147G1614 Durio zibethinus
Duzib168G1496 Durio zibethinus
Duzib187G0758 Durio zibethinus
ECA232G3262 Erigeron canadensis
ECA236G2030 Erigeron canadensis
EL10Ac9g21433 Beta vulgaris
Eucgr.C00903 Eucalyptus grandis
Eucgr.I01716 Eucalyptus grandis
FAN02G1433 Fragaria x ananassa
FAN05G3109 Fragaria x ananassa
FAN09G4730 Fragaria x ananassa
FAN14G0012 Fragaria x ananassa
FAN14G5525 Fragaria x ananassa
FAN19G2976 Fragaria x ananassa
FAN23G2602 Fragaria x ananassa
FAN26G2201 Fragaria x ananassa
FAN26G2531 Fragaria x ananassa
FAN28G1853 Fragaria x ananassa
FvH4_1g07220 Fragaria vesca
FvH4_2g04400 Fragaria vesca
FvH4_6g52050 Fragaria vesca
Glyma.01G002902 Glycine max
Glyma.07G129200 Glycine max
Glyma.16G067900 Glycine max
Glyma.19G079000 Glycine max
Gohir.A05G353800 Gossypium hirsutum
Gohir.A06G071900 Gossypium hirsutum
Gohir.D04G059300 Gossypium hirsutum
Gohir.D06G070400 Gossypium hirsutum
Gorai.010G082100 Gossypium raimondii
Gorai.012G066000 Gossypium raimondii
GSVIVG01015217001 Vitis vinifera
GSVIVG01032364001 Vitis vinifera
HanXRQChr04g0126271 Helianthus annuus
HanXRQChr09g0255521 Helianthus annuus
Haze_14773 Corylus avellana
Haze_25898 Corylus avellana
Hma1.2p1_0798F.1_g219710 Hydrangea macrophylla
HPP92_009131 Vanilla planifolia
HPP92_009134 Vanilla planifolia
HPP92_020228 Vanilla planifolia
Hund00041 Selenicereus undatus
Lalb_Chr24g0393791 Lupinus albus
Lalb_Chr24g0403461 Lupinus albus
Lj1g0007362 Lotus japonicus
Lj1g0019130 Lotus japonicus
Lj2g0002582 Lotus japonicus
Lj4C308T6 Lonicera japonica
Lj7A603T64 Lonicera japonica
Lsat_1_v5_gn_4_184580 Lactuca sativa
Lsat_1_v5_gn_8_87601 Lactuca sativa
Manes.03G032700 Manihot esculenta
Manes.15G153100 Manihot esculenta
Mapoly0119s0034 Marchantia polymorpha
MBI01_g01251_MAGBIO Magnolia biondii
MCO03G392 Micromonas commoda
MCO12G305 Micromonas commoda
MD02G1076700 Malus domestica
MD09G1020500 Malus domestica
MD15G1205400 Malus domestica
Medtr6g092630 Medicago truncatula
Medtr7g032900 Medicago truncatula
MELO3C004620.2 Cucumis melo
MELO3C014792.2 Cucumis melo
Migut.H00034 Erythranthe guttata
Migut.J00598 Erythranthe guttata
MSTRG.19522 Avicennia marina
MSTRG.3127 Avicennia marina
Nitab4.5_0007446g0010 Nicotiana tabacum
Nitab4.5_0008889g0010 Nicotiana tabacum
Nitab4.5_0010222g0020 Nicotiana tabacum
Nitab4.5_0010434g0020 Nicotiana tabacum
Nn1g04296 Nelumbo nucifera
Nn4g22541 Nelumbo nucifera
Nn6g33593 Nelumbo nucifera
Nn6g35443 Nelumbo nucifera
Nn8g38897 Nelumbo nucifera
Oeu023838.1 Olea europaea
Oeu034044.1 Olea europaea
Os01g0712600 Oryza sativa ssp. japonica
Os04g0481300 Oryza sativa ssp. japonica
Peaxi162Scf00221g01113 Petunia axillaris
Peaxi162Scf00420g00149 Petunia axillaris
PGR142G3357 Punica granatum
PGR142G4134 Punica granatum
PGSC0003DMG400003266 Solanum tuberosum
PGSC0003DMG400012615 Solanum tuberosum
Phvul.004G171000 Phaseolus vulgaris
Potri.001G340900 Populus trichocarpa
Potri.006G150500 Populus trichocarpa
Pp3c3_17950 Physcomitrium patens
Pp3c3_5930 Physcomitrium patens
PRCOL_00001733 Prasinoderma coloniale
PRCOL_00004756 Prasinoderma coloniale
PRCOL_00006451 Prasinoderma coloniale
Prupe.3G295700 Prunus persica
Prupe.7G211700 Prunus persica
Psat1g050240 Pisum sativum
Psat3g171640 Pisum sativum
PSO063G2718 Papaver somniferum
PSO781G0013 Papaver somniferum
PSO832G3360 Papaver somniferum
QL02p062882 Quercus lobata
QL02p073747 Quercus lobata
RcHm_v2.0_Chr2g0093121 Rosa chinensis
RcHm_v2.0_Chr2g0173561 Rosa chinensis
Rhsim05G0022400 Rhododendron simsii
RhsimUnG0006000 Rhododendron simsii
RhsimUnG0087600 Rhododendron simsii
Sabra06G0119200 Salix brachista
Sabra16G0221200 Salix brachista
SalBow1G5704 Salvia bowleyana
SalBow6G6088 Salvia bowleyana
Sc14g0000760 Simmondsia chinensis
Sc18g0004270 Simmondsia chinensis
Sed0001210 Sechium edule
Sed0013648 Sechium edule
SEGI_05425 Sequoiadendron giganteum
SEGI_08549 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05226 Striga asiatica
SGA_v2.0_scaffold18G08251 Striga asiatica
SMO141G0088 Selaginella moellendorffii
SMO367G0379 Selaginella moellendorffii
Solyc02g093550.3 Solanum lycopersicum
Solyc07g025520.3 Solanum lycopersicum
Solyc07g025530.1 Solanum lycopersicum
Sopen02g038100 Solanum pennellii
Sopen07g013800 Solanum pennellii
Sp3g00390 Schrenkiella parvula
Sp7g27410 Schrenkiella parvula
TAR371G1043 Trochodendron aralioides
TAR626G1518 Trochodendron aralioides
THA.LOC104803985 Tarenaya hassleriana
THA.LOC104821099 Tarenaya hassleriana
Thecc.04G021900 Theobroma cacao
Thecc.09G091200 Theobroma cacao
Thhalv10021286m.g Eutrema salsugineum
Thhalv10025782m.g Eutrema salsugineum
TPR.G1140 Trifolium pratense
TPR.G35490 Trifolium pratense
TWI12G0281 Tripterygium wilfordii
TWI34G1831 Tripterygium wilfordii
unitig_27.g24729 Utricularia gibba
unitig_27.g24730 Utricularia gibba
vmacro05889 Vaccinium macrocarpon
vmacro17223 Vaccinium macrocarpon
VMungo0464G0681 Vigna mungo
Zm00001eb079420 Zea mays
Zm00001eb361350 Zea mays

User provided reference genes

Program Settings