Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17250 Brassica napus
Aa31LG5G6030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1720 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3571 Anthoceros agrestis
Actinidia00865 Actinidia chinensis
Actinidia07686 Actinidia chinensis
Actinidia26765 Actinidia chinensis
Actinidia39564 Actinidia chinensis
Ah.09g232680 Amaranthus hybridus
AL283U10010 Arabidopsis lyrata
Aqoxy1G01733 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C42E7X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CFG5D5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJ8JNY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCPZ5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VW63YQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2ZVX9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6T6TW Arachis hypogaea
AT2G30890 Arabidopsis thaliana
AT4G18260 Arabidopsis thaliana
ATR0585G027 Amborella trichopoda
Atru.chr10.1271 Acer truncatum
Atru.chr6.2056 Acer truncatum
Atru.chr6.2057 Acer truncatum
AUR62027524 Chenopodium quinoa
AUR62030218 Chenopodium quinoa
BcaB01g04073 Brassica carinata
BcaC09g51539 Brassica carinata
BcaNung05124 Brassica carinata
BcaNung05670 Brassica carinata
BolC1t01181H Brassica oleracea
BolC1t01182H Brassica oleracea
BolC3t14414H Brassica oleracea
BraA03t10999Z Brassica rapa
C03p20360 Brassica napus
CAN.G177.6 Capsicum annuum
CAN.G585.23 Capsicum annuum
CAN.G650.22 Capsicum annuum
CANSAT35G0111 Cannabis sativa
CANSAT64G1817 Cannabis sativa
CARHR124370 Cardamine hirsuta
CARHR225060 Cardamine hirsuta
Carub.0004s1209 Capsella rubella
Carub.0007s2302 Capsella rubella
CBR_g11054 Chara braunii
CBR_g11055 Chara braunii
CBR_g39078 Chara braunii
CBR_g72628 Chara braunii
Cc05_g09710 Coffea canephora
Cc05_g09720 Coffea canephora
Cc09_g09350 Coffea canephora
Cfa000957 Carpinus fangiana
Cfa023073 Carpinus fangiana
Ciclev10017551m.g Citrus clementina
Ciclev10018176m.g Citrus clementina
Ciclev10032788m.g Citrus clementina
CiPaw.03G192200 Carya illinoinensis
CiPaw.09G125400 Carya illinoinensis
CiPaw.10G092800 Carya illinoinensis
ClCG03G007050 Citrullus lanatus
ClCG11G016480 Citrullus lanatus
COL.COLO4_08895 Corchorus olitorius
Cpa.g.sc166.22 Carica papaya
Cpa.g.sc50.105 Carica papaya
CsaV3_1G032600 Cucumis sativus L.
CsaV3_4G031930 Cucumis sativus L.
DCAR_009814 Daucus carota
Dinv04596 Davidia involucrata
Dinv07110 Davidia involucrata
Dinv30727 Davidia involucrata
Dinv32270 Davidia involucrata
Duzib130G0003 Durio zibethinus
Duzib133G0706 Durio zibethinus
Duzib138G0378 Durio zibethinus
Duzib192G0067 Durio zibethinus
Duzib235G1174 Durio zibethinus
ECA232G2777 Erigeron canadensis
ECA247G1491 Erigeron canadensis
ECA248G3567 Erigeron canadensis
EL10Ac8g19737 Beta vulgaris
Eucgr.A02016 Eucalyptus grandis
Eucgr.E02407 Eucalyptus grandis
FAN02G0845 Fragaria x ananassa
FAN05G3397 Fragaria x ananassa
FAN09G3167 Fragaria x ananassa
FAN11G3247 Fragaria x ananassa
FAN14G0735 Fragaria x ananassa
FvH4_3g05770 Fragaria vesca
FvH4_6g38580 Fragaria vesca
Glyma.02G285000 Glycine max
Glyma.05G130200 Glycine max
Glyma.08G085000 Glycine max
Glyma.08G308000 Glycine max
Glyma.12G159050 Glycine max
Glyma.14G029800 Glycine max
Glyma.18G109600 Glycine max
Gohir.A06G137100 Gossypium hirsutum
Gohir.A07G080600 Gossypium hirsutum
Gohir.A07G183400 Gossypium hirsutum
Gohir.A10G039700 Gossypium hirsutum
Gohir.A11G156800 Gossypium hirsutum
Gohir.D06G142100 Gossypium hirsutum
Gohir.D07G086200 Gossypium hirsutum
Gohir.D07G190000 Gossypium hirsutum
Gohir.D10G040500 Gossypium hirsutum
Gohir.D11G163066 Gossypium hirsutum
Gohir.D11G163850 Gossypium hirsutum
Gorai.001G092200 Gossypium raimondii
Gorai.001G211700 Gossypium raimondii
Gorai.007G173700 Gossypium raimondii
Gorai.007G174600 Gossypium raimondii
Gorai.010G165900 Gossypium raimondii
Gorai.011G042700 Gossypium raimondii
GSVIVG01020846001 Vitis vinifera
HanXRQChr02g0047331 Helianthus annuus
HanXRQChr10g0281121 Helianthus annuus
Haze_05578 Corylus avellana
Haze_13531 Corylus avellana
Haze_13532 Corylus avellana
Hma1.2p1_0286F.1_g114125 Hydrangea macrophylla
HPP92_023265 Vanilla planifolia
HPP92_023300 Vanilla planifolia
HPP92_024627 Vanilla planifolia
Hund21525 Selenicereus undatus
Lalb_Chr07g0188591 Lupinus albus
Lalb_Chr07g0191291 Lupinus albus
Lj1A1186G51 Lonicera japonica
Lj1P601T11 Lonicera japonica
Lj6g0015620 Lotus japonicus
LjContig00049g0009686 Lotus japonicus
LjContig00141g0001088 Lotus japonicus
LjContig00141g0012589 Lotus japonicus
Lsat_1_v5_gn_1_97701 Lactuca sativa
Lsat_1_v5_gn_9_9080 Lactuca sativa
Manes.01G130600 Manihot esculenta
Manes.02G088400 Manihot esculenta
Manes.15G120400 Manihot esculenta
Manes.17G068900 Manihot esculenta
Mapoly0002s0239 Marchantia polymorpha
Mapoly0062s0045 Marchantia polymorpha
MBI10_g21111_MAGBIO Magnolia biondii
MD05G1285600 Malus domestica
MD09G1149600 Malus domestica
MD10G1263600 Malus domestica
MD17G1136300 Malus domestica
Medtr3g046760 Medicago truncatula
Medtr4g096780 Medicago truncatula
MELO3C002720.2 Cucumis melo
MELO3C026969.2 Cucumis melo
Migut.E01773 Erythranthe guttata
Migut.H01368 Erythranthe guttata
MSTRG.14284 Avicennia marina
MSTRG.14286 Avicennia marina
MSTRG.16231 Avicennia marina
Nitab4.5_0001655g0080 Nicotiana tabacum
Nitab4.5_0001701g0140 Nicotiana tabacum
Nitab4.5_0001867g0070 Nicotiana tabacum
Nitab4.5_0001883g0010 Nicotiana tabacum
Nitab4.5_0002251g0100 Nicotiana tabacum
Nitab4.5_0005219g0110 Nicotiana tabacum
Nn3g20702 Nelumbo nucifera
Nn4g26538 Nelumbo nucifera
Oeu020049.2 Olea europaea
Oeu030917.1 Olea europaea
Oeu031251.1 Olea europaea
Oeu040051.1 Olea europaea
Os05g0565100 Oryza sativa ssp. japonica
Peaxi162Scf00111g00231 Petunia axillaris
PGR042G0397 Punica granatum
PGR042G2846 Punica granatum
PGSC0003DMG400008286 Solanum tuberosum
PGSC0003DMG400017352 Solanum tuberosum
Phvul.002G193700 Phaseolus vulgaris
Phvul.006G022300 Phaseolus vulgaris
Phvul.008G193800 Phaseolus vulgaris
Potri.002G057900 Populus trichocarpa
Potri.005G204300 Populus trichocarpa
Potri.011G080400 Populus trichocarpa
Pp3c1_28990 Physcomitrium patens
Pp3c21_1640 Physcomitrium patens
Pp3c2_10210 Physcomitrium patens
Prupe.3G176500 Prunus persica
Prupe.4G079100 Prunus persica
Psat5g195400 Pisum sativum
Psat7g090120 Pisum sativum
PSO170G4755 Papaver somniferum
PSO357G0138 Papaver somniferum
QL05p058801 Quercus lobata
QL05p058830 Quercus lobata
QL08p044878 Quercus lobata
RcHm_v2.0_Chr2g0151991 Rosa chinensis
RcHm_v2.0_Chr5g0013761 Rosa chinensis
Rhsim02G0197000 Rhododendron simsii
Rhsim02G0197100 Rhododendron simsii
Rhsim04G0082400 Rhododendron simsii
Sabra02G0047200 Salix brachista
Sabra05G0154900 Salix brachista
Sabra11G0067600 Salix brachista
Sabra11G0069900 Salix brachista
SalBow7G3367 Salvia bowleyana
SalBow8G0837 Salvia bowleyana
Sc17g0004980 Simmondsia chinensis
Sed0016177 Sechium edule
Sed0026027 Sechium edule
SEGI_33807 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30643 Striga asiatica
SGA_v2.0_scaffold130G34220 Striga asiatica
SMO347G0112 Selaginella moellendorffii
Solyc02g070660.3 Solanum lycopersicum
Solyc07g045490.3 Solanum lycopersicum
Solyc07g056230.3 Solanum lycopersicum
Sopen02g019740 Solanum pennellii
Sopen07g029590 Solanum pennellii
Sp4g13360 Schrenkiella parvula
Sp7g15800 Schrenkiella parvula
TAR627G0618 Trochodendron aralioides
THA.LOC104806125 Tarenaya hassleriana
THA.LOC104816083 Tarenaya hassleriana
THA.LOC104826238 Tarenaya hassleriana
THA.LOC109115990 Tarenaya hassleriana
Thecc.01G170100 Theobroma cacao
Thecc.06G152300 Theobroma cacao
Thhalv10017123m.g Eutrema salsugineum
TPR.G16772 Trifolium pratense
TPR.G4834 Trifolium pratense
TWI23G0574 Tripterygium wilfordii
TWI59G0307 Tripterygium wilfordii
TWI73G0053 Tripterygium wilfordii
vmacro09185 Vaccinium macrocarpon
vmacro11012 Vaccinium macrocarpon
VMungo0251G3351 Vigna mungo
VMungo0540G2215 Vigna mungo
VMungo0647G0626 Vigna mungo
Zm00001eb157410 Zea mays
Zm00001eb295960 Zea mays

User provided reference genes

Program Settings