Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13200 Brassica napus
A07p32810 Brassica napus
A09p49650 Brassica napus
Aa31LG10G11680 Aethionema arabicum
Aa31LG2G2450 Aethionema arabicum
Actinidia03079 Actinidia chinensis
Actinidia03248 Actinidia chinensis
Ah.05g174650 Amaranthus hybridus
Ah.12g052710 Amaranthus hybridus
AL2G22090 Arabidopsis lyrata
AL5G38210 Arabidopsis lyrata
Aqoxy1G02573 Aquilegia oxysepala
Aqoxy7G00695 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02D1WC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KND74I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M2KELG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2MMYE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.USH98G Arachis hypogaea
AT1G65420 Arabidopsis thaliana
AT3G56830 Arabidopsis thaliana
ATR0757G095 Amborella trichopoda
ATR0829G188 Amborella trichopoda
Atru.chr12.1673 Acer truncatum
Atru.chr2.3094 Acer truncatum
Atru.chr5.279 Acer truncatum
AUR62004184 Chenopodium quinoa
AUR62010863 Chenopodium quinoa
AUR62013684 Chenopodium quinoa
AUR62019862 Chenopodium quinoa
BcaB05g24112 Brassica carinata
BcaC03g14703 Brassica carinata
BcaC07g39993 Brassica carinata
BcaC07g40116 Brassica carinata
BcaNung05533 Brassica carinata
BolC6t38996H Brassica oleracea
BolC8t50824H Brassica oleracea
BraA02t06376Z Brassica rapa
BraA07t30908Z Brassica rapa
BraA09t40418Z Brassica rapa
C02p21360 Brassica napus
C06p39040 Brassica napus
C08p32060 Brassica napus
CAN.G203.37 Capsicum annuum
CAN.G492.40 Capsicum annuum
CAN.G687.9 Capsicum annuum
CAN.G728.10 Capsicum annuum
CANSAT21G2199 Cannabis sativa
CANSAT54G0399 Cannabis sativa
CARHR057080 Cardamine hirsuta
CARHR166980 Cardamine hirsuta
Carub.0002s1113 Capsella rubella
Carub.0005s2356 Capsella rubella
Ca_18381_v3 Cicer arietinum L.
Cc02_g24130 Coffea canephora
Cc09_g04030 Coffea canephora
CDE02G3510 Ceratophyllum demersum
CDE09G0863 Ceratophyllum demersum
Cfa001764 Carpinus fangiana
Ciclev10012826m.g Citrus clementina
Ciclev10023298m.g Citrus clementina
Ciclev10024673m.g Citrus clementina
CiPaw.01G264100 Carya illinoinensis
CiPaw.07G083800 Carya illinoinensis
ClCG03G010340 Citrullus lanatus
ClCG06G000490 Citrullus lanatus
COL.COLO4_20772 Corchorus olitorius
COL.COLO4_36606 Corchorus olitorius
Cpa.g.sc99.41 Carica papaya
CsaV3_1G044300 Cucumis sativus L.
CSS0000382 Camellia sinensis var. sinensis
CSS0000675 Camellia sinensis var. sinensis
CSS0008987 Camellia sinensis var. sinensis
CSS0021590 Camellia sinensis var. sinensis
DCAR_018092 Daucus carota
Dinv22962 Davidia involucrata
Dinv32363 Davidia involucrata
Dinv41778 Davidia involucrata
Duzib128G0346 Durio zibethinus
Duzib177G1093 Durio zibethinus
ECA232G0659 Erigeron canadensis
ECA236G3992 Erigeron canadensis
EL10Ac1g00862 Beta vulgaris
EL10Ac5g12939 Beta vulgaris
Eucgr.B01437 Eucalyptus grandis
Eucgr.E01444 Eucalyptus grandis
Eucgr.K00008 Eucalyptus grandis
FAN01G0117 Fragaria x ananassa
FAN02G1717 Fragaria x ananassa
FAN03G2800 Fragaria x ananassa
FAN06G1325 Fragaria x ananassa
FAN06G3517 Fragaria x ananassa
FAN09G4795 Fragaria x ananassa
FAN10G0734 Fragaria x ananassa
FAN10G0743 Fragaria x ananassa
FvH4_6g00150 Fragaria vesca
FvH4_7g11410 Fragaria vesca
Glyma.01G139100 Glycine max
Glyma.03G028200 Glycine max
Glyma.07G181800 Glycine max
Glyma.08G068000 Glycine max
Gohir.A02G087501 Gossypium hirsutum
Gohir.A02G087502 Gossypium hirsutum
Gohir.A02G106400 Gossypium hirsutum
Gohir.D02G102500 Gossypium hirsutum
Gohir.D03G071600 Gossypium hirsutum
Gorai.003G088400 Gossypium raimondii
Gorai.005G116300 Gossypium raimondii
GSVIVG01003760001 Vitis vinifera
GSVIVG01027660001 Vitis vinifera
HanXRQChr16g0511791 Helianthus annuus
HanXRQChr16g0532431 Helianthus annuus
Haze_04577 Corylus avellana
Haze_15905 Corylus avellana
Haze_16791 Corylus avellana
Hma1.2p1_0301F.1_g118540 Hydrangea macrophylla
Hma1.2p1_2339F.1_g320270 Hydrangea macrophylla
HPP92_007388 Vanilla planifolia
HPP92_014445 Vanilla planifolia
HPP92_014446 Vanilla planifolia
Hund17034 Selenicereus undatus
Hund21926 Selenicereus undatus
Hund27370 Selenicereus undatus
Lalb_Chr05g0217751 Lupinus albus
Lalb_Chr06g0171011 Lupinus albus
Lalb_Chr07g0189971 Lupinus albus
Lalb_Chr11g0071731 Lupinus albus
Lj1A982T79 Lonicera japonica
Lj1P584T26 Lonicera japonica
Lj3g0009112 Lotus japonicus
Lj4g0016274 Lotus japonicus
Lj7P531T44 Lonicera japonica
Lsat_1_v5_gn_6_23480 Lactuca sativa
Lsat_1_v5_gn_7_9500 Lactuca sativa
Manes.12G002200 Manihot esculenta
Manes.13G001600 Manihot esculenta
Manes.13G153600 Manihot esculenta
Mapoly0009s0023 Marchantia polymorpha
MBI12_g20405_MAGBIO Magnolia biondii
MBI12_g35692_MAGBIO Magnolia biondii
MBI12_g47648_MAGBIO Magnolia biondii
MD04G1247900 Malus domestica
MD07G1118800 Malus domestica
MD12G1262600 Malus domestica
Medtr4g025390 Medicago truncatula
Medtr4g025400 Medicago truncatula
Medtr4g093535 Medicago truncatula
MELO3C010023.2 Cucumis melo
MELO3C022491.2 Cucumis melo
Migut.F02097 Erythranthe guttata
Migut.K00928 Erythranthe guttata
Migut.K01510 Erythranthe guttata
Migut.N00011 Erythranthe guttata
MSTRG.21747 Avicennia marina
MSTRG.9243 Avicennia marina
Nitab4.5_0000725g0150 Nicotiana tabacum
Nitab4.5_0000751g0140 Nicotiana tabacum
Nitab4.5_0000819g0040 Nicotiana tabacum
Nitab4.5_0002818g0010 Nicotiana tabacum
Nn6g34072 Nelumbo nucifera
Nn6g34074 Nelumbo nucifera
Oeu002667.1 Olea europaea
Oeu014621.1 Olea europaea
Oeu062040.1 Olea europaea
Os02g0233333 Oryza sativa ssp. japonica
Os03g0852600 Oryza sativa ssp. japonica
Os09g0287500 Oryza sativa ssp. japonica
Peaxi162Scf00017g01719 Petunia axillaris
Peaxi162Scf00253g00513 Petunia axillaris
PGR042G0353 Punica granatum
PGR102G3352 Punica granatum
PGSC0003DMG400017600 Solanum tuberosum
Phvul.002G212700 Phaseolus vulgaris
Phvul.010G081000 Phaseolus vulgaris
Potri.002G146000 Populus trichocarpa
Potri.008G076900 Populus trichocarpa
Pp3c11_23050 Physcomitrium patens
Prupe.2G142000 Prunus persica
Prupe.6G364400 Prunus persica
Psat7g101080 Pisum sativum
Psat7g231040 Pisum sativum
PSO063G1762 Papaver somniferum
PSO478G1875 Papaver somniferum
PSO754G0063 Papaver somniferum
PSO782G1564 Papaver somniferum
QL08p052874 Quercus lobata
QL10p015946 Quercus lobata
RcHm_v2.0_Chr1g0349701 Rosa chinensis
RcHm_v2.0_Chr3g0447501 Rosa chinensis
Rhsim01G0149500 Rhododendron simsii
Rhsim09G0192700 Rhododendron simsii
Sabra02G0113700 Salix brachista
Sabra08G0057300 Salix brachista
Sabra10G0138700 Salix brachista
SalBow1G3438 Salvia bowleyana
SalBow1G3450 Salvia bowleyana
SalBow5G2812 Salvia bowleyana
Sc16g0010580 Simmondsia chinensis
Sc23g0003710 Simmondsia chinensis
Sed0003908 Sechium edule
Sed0011845 Sechium edule
SEGI_08732 Sequoiadendron giganteum
SEGI_25888 Sequoiadendron giganteum
SGA_v2.0_scaffold236G43735 Striga asiatica
SGA_v2.0_scaffold62G21489 Striga asiatica
SMO171G0068 Selaginella moellendorffii
SMO287G0015 Selaginella moellendorffii
SMO353G0155 Selaginella moellendorffii
SMO353G0424 Selaginella moellendorffii
Solyc03g063060.3 Solanum lycopersicum
Solyc10g085930.3 Solanum lycopersicum
Sopen03g015350 Solanum pennellii
Sopen10g035310 Solanum pennellii
Sp5g05760 Schrenkiella parvula
Sp5g20150 Schrenkiella parvula
TAR375G0253 Trochodendron aralioides
TAR633G0717 Trochodendron aralioides
THA.LOC104803252 Tarenaya hassleriana
THA.LOC104821969 Tarenaya hassleriana
Thecc.05G188200 Theobroma cacao
Thecc.08G173300 Theobroma cacao
Thhalv10006407m.g Eutrema salsugineum
Thhalv10019157m.g Eutrema salsugineum
TPR.G2829 Trifolium pratense
TPR.G7584 Trifolium pratense
TWI14G0905 Tripterygium wilfordii
TWI36G0830 Tripterygium wilfordii
TWI59G1030 Tripterygium wilfordii
unitig_26.g10613 Utricularia gibba
unitig_46.g18569 Utricularia gibba
vmacro09893 Vaccinium macrocarpon
vmacro19820 Vaccinium macrocarpon
vmacro21024 Vaccinium macrocarpon
VMungo0251G0018 Vigna mungo
VMungo0331G1685 Vigna mungo
Zm00001eb210610 Zea mays
Zm00001eb213480 Zea mays

User provided reference genes

Program Settings