Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02570 Brassica napus
A07p41180 Brassica napus
Aa31LG4G5880 Aethionema arabicum
Aa31LG6G13090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.262 Anthoceros agrestis
Actinidia17459 Actinidia chinensis
Actinidia17460 Actinidia chinensis
Actinidia22997 Actinidia chinensis
Actinidia31011 Actinidia chinensis
Ah.02g124560 Amaranthus hybridus
Ah.05g171910 Amaranthus hybridus
AL2G35620 Arabidopsis lyrata
AL7G14870 Arabidopsis lyrata
Aqoxy6G02347 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1VZ0XU Arachis hypogaea
AT1G75640 Arabidopsis thaliana
AT4G36180 Arabidopsis thaliana
ATR0149G019 Amborella trichopoda
Atru.chr13.352 Acer truncatum
Atru.chr3.775 Acer truncatum
AUR62014420 Chenopodium quinoa
AUR62014421 Chenopodium quinoa
AUR62019156 Chenopodium quinoa
AUR62019157 Chenopodium quinoa
AUR62024010 Chenopodium quinoa
AUR62043928 Chenopodium quinoa
AUR62043929 Chenopodium quinoa
AUR62043930 Chenopodium quinoa
BcaC08g47057 Brassica carinata
BcaC08g47333 Brassica carinata
BcaNung00752 Brassica carinata
BolC1t00265H Brassica oleracea
BolC6t39998H Brassica oleracea
BraA01t00243Z Brassica rapa
BraA07t31653Z Brassica rapa
C01p02750 Brassica napus
C06p49600 Brassica napus
CAN.G1425.15 Capsicum annuum
CAN.G1425.16 Capsicum annuum
CAN.G2049.1 Capsicum annuum
CAN.G785.2 Capsicum annuum
CAN.G851.5 Capsicum annuum
CANSAT01G1701 Cannabis sativa
CARHR069040 Cardamine hirsuta
CARHR244590 Cardamine hirsuta
Carub.0002s2248 Capsella rubella
Carub.0007s0405 Capsella rubella
Ca_02058_v3 Cicer arietinum L.
Ca_07040_v3 Cicer arietinum L.
Ca_24903_v3 Cicer arietinum L.
Cc07_g10500 Coffea canephora
Cc10_g02060 Coffea canephora
CDE02G0833 Ceratophyllum demersum
CDE02G2747 Ceratophyllum demersum
CDE05G1118 Ceratophyllum demersum
CDE09G1388 Ceratophyllum demersum
Cfa006953 Carpinus fangiana
Cfa013910 Carpinus fangiana
Ciclev10000083m.g Citrus clementina
Ciclev10027574m.g Citrus clementina
CiPaw.07G056800 Carya illinoinensis
CiPaw.07G153700 Carya illinoinensis
ClCG01G020140 Citrullus lanatus
COL.COLO4_21953 Corchorus olitorius
COL.COLO4_26192 Corchorus olitorius
Cpa.g.sc140.25 Carica papaya
Cpa.g.sc6.224 Carica papaya
CsaV3_6G046910 Cucumis sativus L.
CSS0005274 Camellia sinensis var. sinensis
CSS0012511 Camellia sinensis var. sinensis
CSS0020599 Camellia sinensis var. sinensis
DCAR_009947 Daucus carota
DCAR_022443 Daucus carota
DCAR_025994 Daucus carota
Dinv31814 Davidia involucrata
Dinv33609 Davidia involucrata
Dinv40066 Davidia involucrata
Duzib093G0896 Durio zibethinus
Duzib187G1534 Durio zibethinus
Duzib264G1308 Durio zibethinus
ECA232G4021 Erigeron canadensis
ECA232G4129 Erigeron canadensis
EL10Ac1g00439 Beta vulgaris
EL10Ac1g00440 Beta vulgaris
Eucgr.F03308 Eucalyptus grandis
Eucgr.I02367 Eucalyptus grandis
FAN08G2518 Fragaria x ananassa
FAN13G2810 Fragaria x ananassa
FAN15G1598 Fragaria x ananassa
FAN18G3023 Fragaria x ananassa
FAN20G0377 Fragaria x ananassa
FAN27G3040 Fragaria x ananassa
FvH4_2g39080 Fragaria vesca
FvH4_5g31360 Fragaria vesca
Glyma.01G168100 Glycine max
Glyma.02G050300 Glycine max
Glyma.04G026700 Glycine max
Glyma.06G026600 Glycine max
Glyma.11G075200 Glycine max
Glyma.16G130400 Glycine max
Gohir.A02G169400 Gossypium hirsutum
Gohir.A05G257800 Gossypium hirsutum
Gohir.A06G006000 Gossypium hirsutum
Gohir.A06G006050 Gossypium hirsutum
Gohir.A11G177300 Gossypium hirsutum
Gohir.D03G010600 Gossypium hirsutum
Gohir.D05G259200 Gossypium hirsutum
Gohir.D06G001800 Gossypium hirsutum
Gohir.D11G185100 Gossypium hirsutum
Gorai.003G011000 Gossypium raimondii
Gorai.007G196700 Gossypium raimondii
Gorai.009G271000 Gossypium raimondii
Gorai.010G006200 Gossypium raimondii
GSVIVG01009829001 Vitis vinifera
GSVIVG01018814001 Vitis vinifera
HanXRQChr02g0055361 Helianthus annuus
HanXRQChr07g0207191 Helianthus annuus
HanXRQChr09g0260581 Helianthus annuus
HanXRQChr09g0269711 Helianthus annuus
HanXRQChr16g0501721 Helianthus annuus
Haze_03799 Corylus avellana
Haze_22589 Corylus avellana
Hma1.2p1_0743F.1_g211510 Hydrangea macrophylla
Hma1.2p1_0773F.1_g216210 Hydrangea macrophylla
HPP92_003290 Vanilla planifolia
HPP92_007356 Vanilla planifolia
Lalb_Chr16g0377581 Lupinus albus
Lalb_Chr22g0354461 Lupinus albus
Lj1g0024365 Lotus japonicus
Lj2C473T2 Lonicera japonica
Lj2C473T3 Lonicera japonica
Lj2g0015819 Lotus japonicus
Lj2P465T30 Lonicera japonica
Lj4C216T2 Lonicera japonica
Lj4P791T44 Lonicera japonica
Lsat_1_v5_gn_4_116021 Lactuca sativa
Lsat_1_v5_gn_4_152881 Lactuca sativa
Manes.02G102100 Manihot esculenta
Manes.05G151900 Manihot esculenta
Mapoly0081s0054 Marchantia polymorpha
MBI09_g27426_MAGBIO Magnolia biondii
MD08G1017600 Malus domestica
MD08G1017800 Malus domestica
MD15G1016500 Malus domestica
Medtr3g113140 Medicago truncatula
Medtr5g021670 Medicago truncatula
Medtr7g015910 Medicago truncatula
MELO3C007887.2 Cucumis melo
Migut.C00794 Erythranthe guttata
Migut.H01090 Erythranthe guttata
MSTRG.23419 Avicennia marina
MSTRG.24263 Avicennia marina
Nitab4.5_0000438g0020 Nicotiana tabacum
Nitab4.5_0002880g0050 Nicotiana tabacum
Nitab4.5_0005859g0010 Nicotiana tabacum
Nitab4.5_0005975g0010 Nicotiana tabacum
Nitab4.5_0011205g0020 Nicotiana tabacum
Nitab4.5_0029266g0010 Nicotiana tabacum
Nn1g05166 Nelumbo nucifera
Oeu035104.1 Olea europaea
Oeu036930.1 Olea europaea
Oeu046247.1 Olea europaea
Oeu052721.1 Olea europaea
Os04g0576900 Oryza sativa ssp. japonica
Peaxi162Scf00010g00022 Petunia axillaris
Peaxi162Scf00083g00094 Petunia axillaris
Peaxi162Scf00287g00133 Petunia axillaris
PGR031G2554 Punica granatum
PGR119G0835 Punica granatum
PGSC0003DMG400003551 Solanum tuberosum
PGSC0003DMG400003714 Solanum tuberosum
PGSC0003DMG400022565 Solanum tuberosum
Phvul.002G111100 Phaseolus vulgaris
Phvul.003G260300 Phaseolus vulgaris
Phvul.009G014500 Phaseolus vulgaris
Potri.002G027400 Populus trichocarpa
Potri.005G235100 Populus trichocarpa
Potri.007G014700 Populus trichocarpa
Pp3c11_18980 Physcomitrium patens
Pp3c22_21420 Physcomitrium patens
Pp3c7_3320 Physcomitrium patens
Prupe.1G370300 Prunus persica
Prupe.7G166100 Prunus persica
Psat2g155640 Pisum sativum
Psat5g014720 Pisum sativum
PSO170G3814 Papaver somniferum
QL02p010771 Quercus lobata
QL06p033775 Quercus lobata
RcHm_v2.0_Chr6g0302191 Rosa chinensis
RcHm_v2.0_Chr7g0226621 Rosa chinensis
Rhsim08G0034800 Rhododendron simsii
Rhsim10G0214000 Rhododendron simsii
Sabra02G0021600 Salix brachista
Sabra05G0181400 Salix brachista
Sabra07G0011900 Salix brachista
SalBow7G4754 Salvia bowleyana
Sc03g0003520 Simmondsia chinensis
Sc26g0003250 Simmondsia chinensis
Sed0022094 Sechium edule
SEGI_12506 Sequoiadendron giganteum
SEGI_19600 Sequoiadendron giganteum
SEGI_34667 Sequoiadendron giganteum
SGA_v2.0_scaffold79G25639 Striga asiatica
SMO235G0007 Selaginella moellendorffii
SMO347G0297 Selaginella moellendorffii
SMO351G0626 Selaginella moellendorffii
Solyc02g084370.2 Solanum lycopersicum
Solyc03g033610.1 Solanum lycopersicum
Solyc04g081080.1 Solanum lycopersicum
Sopen02g029080 Solanum pennellii
Sopen03g006390 Solanum pennellii
Sopen04g034700 Solanum pennellii
Sp5g30750 Schrenkiella parvula
Sp7g33930 Schrenkiella parvula
TAR376G0646 Trochodendron aralioides
TAR381G1667 Trochodendron aralioides
TAR625G0077 Trochodendron aralioides
TAR625G1546 Trochodendron aralioides
TAR628G1059 Trochodendron aralioides
THA.LOC104811398 Tarenaya hassleriana
THA.LOC104819763 Tarenaya hassleriana
Thecc.01G022000 Theobroma cacao
Thecc.08G038100 Theobroma cacao
Thhalv10018033m.g Eutrema salsugineum
Thhalv10024296m.g Eutrema salsugineum
TPR.G2402 Trifolium pratense
TPR.G30294 Trifolium pratense
TWI73G0111 Tripterygium wilfordii
vmacro21910 Vaccinium macrocarpon
vmacro23492 Vaccinium macrocarpon
VMungo0251G1479 Vigna mungo
VMungo1215G2003 Vigna mungo
VMungo1215G2322 Vigna mungo
VMungo1309G2578 Vigna mungo
Zm00001eb073370 Zea mays
Zm00001eb200690 Zea mays
Zm00001eb428530 Zea mays

User provided reference genes

Program Settings