Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35860 Brassica napus
A05p31040 Brassica napus
A09p28170 Brassica napus
Aa31LG8G5440 Aethionema arabicum
Aa31LG9G2970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3063 Anthoceros agrestis
Actinidia19766 Actinidia chinensis
Actinidia25078 Actinidia chinensis
Actinidia31035 Actinidia chinensis
Actinidia35539 Actinidia chinensis
Ah.04g161230 Amaranthus hybridus
Ah.11g047210 Amaranthus hybridus
AL3G31890 Arabidopsis lyrata
AL6G45200 Arabidopsis lyrata
Aqoxy2G02858 Aquilegia oxysepala
Aqoxy3G00373 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4N6YKT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A0V37P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BUM0G4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2QG3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FXRR0Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LM15HT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTC9PY Arachis hypogaea
AT3G18580 Arabidopsis thaliana
AT4G11060 Arabidopsis thaliana
ATR0743G103 Amborella trichopoda
ATR0787G175 Amborella trichopoda
Atru.chr2.119 Acer truncatum
Atru.chr9.728 Acer truncatum
AUR62000718 Chenopodium quinoa
AUR62005246 Chenopodium quinoa
AUR62032179 Chenopodium quinoa
AUR62036939 Chenopodium quinoa
BcaB01g02721 Brassica carinata
BcaB06g25906 Brassica carinata
BcaC04g21099 Brassica carinata
BcaC05g28599 Brassica carinata
BcaC09g48816 Brassica carinata
BolC1t04526H Brassica oleracea
BolC5t33432H Brassica oleracea
BolC9t56406H Brassica oleracea
BraA01t03665Z Brassica rapa
BraA05t21946Z Brassica rapa
BraA09t38380Z Brassica rapa
C01p45650 Brassica napus
C05p47020 Brassica napus
C09p35700 Brassica napus
CAN.G1273.25 Capsicum annuum
CAN.G578.2 Capsicum annuum
CANSAT11G1420 Cannabis sativa
CARHR093940 Cardamine hirsuta
CARHR255550 Cardamine hirsuta
Carub.0003s1836 Capsella rubella
Carub.0006s2983 Capsella rubella
Ca_25849_v3 Cicer arietinum L.
Ca_25850_v3 Cicer arietinum L.
Cc02_g34550 Coffea canephora
Cc04_g07640 Coffea canephora
CDE02G3361 Ceratophyllum demersum
CDE03G0322 Ceratophyllum demersum
CDE04G1152 Ceratophyllum demersum
CDE08G0605 Ceratophyllum demersum
Cfa019837 Carpinus fangiana
Ciclev10002449m.g Citrus clementina
Ciclev10022157m.g Citrus clementina
CiPaw.07G025600 Carya illinoinensis
CiPaw.08G158500 Carya illinoinensis
CiPaw.15G125100 Carya illinoinensis
ClCG03G017590 Citrullus lanatus
ClCG04G011320 Citrullus lanatus
COL.COLO4_03802 Corchorus olitorius
Cpa.g.sc13.67 Carica papaya
Cpa.g.sc48.128 Carica papaya
CsaV3_1G006450 Cucumis sativus L.
CsaV3_1G038450 Cucumis sativus L.
CSS0009700 Camellia sinensis var. sinensis
CSS0029797 Camellia sinensis var. sinensis
CSS0033355 Camellia sinensis var. sinensis
DCAR_003378 Daucus carota
DCAR_011552 Daucus carota
DCAR_022131 Daucus carota
DCAR_029838 Daucus carota
Dinv05263 Davidia involucrata
Dinv30851 Davidia involucrata
Dinv36892 Davidia involucrata
Dinv38598 Davidia involucrata
Duzib128G0923 Durio zibethinus
Duzib205G0631 Durio zibethinus
ECA246G0848 Erigeron canadensis
EL10Ac4g09868 Beta vulgaris
EL10Ac5g11239 Beta vulgaris
Eucgr.B00672 Eucalyptus grandis
Eucgr.B00678 Eucalyptus grandis
Eucgr.H03273 Eucalyptus grandis
FAN02G4538 Fragaria x ananassa
FAN05G3849 Fragaria x ananassa
FAN09G2269 Fragaria x ananassa
FvH4_4g00740 Fragaria vesca
FvH4_5g12820 Fragaria vesca
FvH4_6g07030 Fragaria vesca
Glyma.05G014200 Glycine max
Glyma.10G149700 Glycine max
Glyma.20G238600 Glycine max
Gohir.A07G040800 Gossypium hirsutum
Gohir.A08G207500 Gossypium hirsutum
Gohir.D07G045000 Gossypium hirsutum
Gohir.D08G224100 Gossypium hirsutum
Gorai.001G048000 Gossypium raimondii
Gorai.004G238000 Gossypium raimondii
GSVIVG01022737001 Vitis vinifera
GSVIVG01031193001 Vitis vinifera
HanXRQChr09g0249921 Helianthus annuus
HanXRQChr16g0502061 Helianthus annuus
HanXRQChr16g0507601 Helianthus annuus
Haze_04098 Corylus avellana
Haze_18587 Corylus avellana
Haze_18588 Corylus avellana
Hma1.2p1_0595F.1_g186040 Hydrangea macrophylla
Hma1.2p1_0595F.1_g186050 Hydrangea macrophylla
Hma1.2p1_1320F.1_g275300 Hydrangea macrophylla
HPP92_013965 Vanilla planifolia
HPP92_021349 Vanilla planifolia
HPP92_021354 Vanilla planifolia
Hund02528 Selenicereus undatus
Hund07120 Selenicereus undatus
Lalb_Chr06g0167581 Lupinus albus
Lalb_Chr13g0302421 Lupinus albus
Lj4g0009401 Lotus japonicus
Lj5g0023717 Lotus japonicus
Lj9A432T69 Lonicera japonica
Lj9P203T13 Lonicera japonica
Lsat_1_v5_gn_4_112141 Lactuca sativa
Manes.01G021700 Manihot esculenta
Manes.11G104600 Manihot esculenta
Mapoly0132s0028 Marchantia polymorpha
MBI16_g23745_MAGBIO Magnolia biondii
MD04G1196700 Malus domestica
MD06G1209800 Malus domestica
MD12G1209600 Malus domestica
MD14G1220600 Malus domestica
Medtr1g083740 Medicago truncatula
Medtr4g111750 Medicago truncatula
MELO3C002071.2 Cucumis melo
MELO3C015270.2 Cucumis melo
Migut.B01003 Erythranthe guttata
Migut.N02424 Erythranthe guttata
MSTRG.12406 Avicennia marina
MSTRG.17664 Avicennia marina
MSTRG.20400 Avicennia marina
Nitab4.5_0000208g0130 Nicotiana tabacum
Nitab4.5_0002612g0030 Nicotiana tabacum
Nitab4.5_0006132g0030 Nicotiana tabacum
Nitab4.5_0022030g0010 Nicotiana tabacum
Nn3g19136 Nelumbo nucifera
Nn4g23687 Nelumbo nucifera
Nn4g23688 Nelumbo nucifera
Nn4g25698 Nelumbo nucifera
Oeu020893.1 Olea europaea
Oeu027138.3 Olea europaea
Os01g0642900 Oryza sativa ssp. japonica
Os04g0363700 Oryza sativa ssp. japonica
Os05g0509700 Oryza sativa ssp. japonica
Peaxi162Scf00037g01814 Petunia axillaris
Peaxi162Scf00119g00121 Petunia axillaris
PGR031G0196 Punica granatum
PGR083G0096 Punica granatum
PGSC0003DMG400024729 Solanum tuberosum
Phvul.003G178400 Phaseolus vulgaris
Phvul.007G199200 Phaseolus vulgaris
Potri.012G058800 Populus trichocarpa
Potri.013G011800 Populus trichocarpa
Pp3c16_13590 Physcomitrium patens
Pp3c5_8750 Physcomitrium patens
Pp3c6_15160 Physcomitrium patens
Prupe.5G215900 Prunus persica
Prupe.6G317000 Prunus persica
Psat0s1958g0160 Pisum sativum
Psat5g107400 Pisum sativum
PSO017G6356 Papaver somniferum
PSO170G6291 Papaver somniferum
PSO302G0075 Papaver somniferum
PSO478G3794 Papaver somniferum
QL03p017844 Quercus lobata
QL10p023175 Quercus lobata
QL93p2009_0056 Quercus lobata
RcHm_v2.0_Chr1g0345881 Rosa chinensis
RcHm_v2.0_Chr3g0456561 Rosa chinensis
RcHm_v2.0_Chr4g0439671 Rosa chinensis
RcHm_v2.0_Chr7g0184411 Rosa chinensis
Rhsim05G0135700 Rhododendron simsii
Rhsim11G0092300 Rhododendron simsii
Sabra12G0041200 Salix brachista
Sabra13G0010300 Salix brachista
SalBow1G3552 Salvia bowleyana
SalBow3G0049 Salvia bowleyana
SalBow6G1600 Salvia bowleyana
SalBow7G4741 Salvia bowleyana
Sc04g0003790 Simmondsia chinensis
Sc06g0005800 Simmondsia chinensis
Sed0016028 Sechium edule
Sed0018825 Sechium edule
SEGI_18741 Sequoiadendron giganteum
SEGI_38419 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01949 Striga asiatica
SGA_v2.0_scaffold8G04328 Striga asiatica
SHI18084 Sapria himalayana
SMO119G0378 Selaginella moellendorffii
SMO236G0098 Selaginella moellendorffii
Solyc01g100080.3 Solanum lycopersicum
Solyc12g038370.2 Solanum lycopersicum
Sopen01g043610 Solanum pennellii
Sopen12g018510 Solanum pennellii
Sp3g16660 Schrenkiella parvula
Sp6g06390 Schrenkiella parvula
TAR365G0680 Trochodendron aralioides
TAR371G1106 Trochodendron aralioides
TAR636G3513 Trochodendron aralioides
THA.LOC104803364 Tarenaya hassleriana
THA.LOC104818738 Tarenaya hassleriana
THA.LOC104821851 Tarenaya hassleriana
Thecc.02G279000 Theobroma cacao
Thecc.03G026800 Theobroma cacao
Thecc.05G318800 Theobroma cacao
Thhalv10021489m.g Eutrema salsugineum
Thhalv10028973m.g Eutrema salsugineum
TPR.G17734 Trifolium pratense
TPR.G26792 Trifolium pratense
TWI15G0714 Tripterygium wilfordii
TWI56G0784 Tripterygium wilfordii
TWI81G1091 Tripterygium wilfordii
unitig_22.g5685 Utricularia gibba
unitig_747.g21338 Utricularia gibba
vmacro01534 Vaccinium macrocarpon
vmacro17685 Vaccinium macrocarpon
VMungo0720G1378 Vigna mungo
VMungo1215G0298 Vigna mungo
Zm00001eb158710 Zea mays
Zm00001eb292410 Zea mays

User provided reference genes

Program Settings