Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29620 Brassica napus
Aa31LG5G6610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2164 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3515 Anthoceros agrestis
Actinidia01090 Actinidia chinensis
Actinidia22650 Actinidia chinensis
AL6G47100 Arabidopsis lyrata
AL8G26330 Arabidopsis lyrata
Aqoxy1G04103 Aquilegia oxysepala
Aqoxy3G02062 Aquilegia oxysepala
Aqoxy4G00074 Aquilegia oxysepala
Aqoxy6G01250 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.04ACRJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0A7D8K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.87TYSS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AI6U0B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CW63DQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NVJ6TJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TFH4LI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZ89S9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WE98Q3 Arachis hypogaea
AT4G12240 Arabidopsis thaliana
AT5G52010 Arabidopsis thaliana
ATR0724G074 Amborella trichopoda
ATR0733G121 Amborella trichopoda
Atru.chr13.732 Acer truncatum
Atru.chr9.1426 Acer truncatum
Atru.chr9.1427 Acer truncatum
AUR62010506 Chenopodium quinoa
AUR62017395 Chenopodium quinoa
BcaB01g02653 Brassica carinata
BcaB01g04176 Brassica carinata
BcaC01g04600 Brassica carinata
BcaC01g06151 Brassica carinata
BolC3t14264H Brassica oleracea
BolC3t15897H Brassica oleracea
BraA03t10883Z Brassica rapa
BraA03t12156Z Brassica rapa
C03p18730 Brassica napus
C03p35890 Brassica napus
CAN.G1231.24 Capsicum annuum
CAN.G1238.11 Capsicum annuum
CAN.G1511.5 Capsicum annuum
CANSAT56G1697 Cannabis sativa
CARHR254000 Cardamine hirsuta
CARHR264940 Cardamine hirsuta
Carub.0006s3137 Capsella rubella
Carub.0008s1210 Capsella rubella
Ca_07312_v3 Cicer arietinum L.
Ca_13157_v3 Cicer arietinum L.
Ca_13277_v3 Cicer arietinum L.
Ca_16433_v3 Cicer arietinum L.
CBR_g49431 Chara braunii
Cc00_g06080 Coffea canephora
Cc08_g13190 Coffea canephora
Cc10_g04730 Coffea canephora
CDE05G2706 Ceratophyllum demersum
Cfa012804 Carpinus fangiana
Cfa018060 Carpinus fangiana
Ciclev10001303m.g Citrus clementina
Ciclev10020688m.g Citrus clementina
Ciclev10029853m.g Citrus clementina
Ciclev10029957m.g Citrus clementina
Ciclev10030369m.g Citrus clementina
Ciclev10030466m.g Citrus clementina
CiPaw.11G147900 Carya illinoinensis
CiPaw.16G039800 Carya illinoinensis
ClCG05G020090 Citrullus lanatus
ClCG10G003100 Citrullus lanatus
COL.COLO4_26557 Corchorus olitorius
Cpa.g.sc21.168 Carica papaya
Cpa.g.sc29.96 Carica papaya
Cre11.g481115 Chlamydomonas reinhardtii
CsaV3_3G003140 Cucumis sativus L.
CsaV3_4G034630 Cucumis sativus L.
CSS0016149 Camellia sinensis var. sinensis
CSS0024091 Camellia sinensis var. sinensis
CSS0031440 Camellia sinensis var. sinensis
DCAR_012788 Daucus carota
DCAR_027077 Daucus carota
Dinv39083 Davidia involucrata
Dinv39283 Davidia involucrata
Duzib041G0113 Durio zibethinus
Duzib205G1708 Durio zibethinus
ECA232G3166 Erigeron canadensis
ECA233G3943 Erigeron canadensis
EL10Ac8g20443 Beta vulgaris
Eucgr.E00472 Eucalyptus grandis
FAN04G0284 Fragaria x ananassa
FAN08G0098 Fragaria x ananassa
FAN13G2596 Fragaria x ananassa
FAN15G1624 Fragaria x ananassa
FAN18G1569 Fragaria x ananassa
FAN20G2526 Fragaria x ananassa
FAN23G0470 Fragaria x ananassa
FAN24G3143 Fragaria x ananassa
FAN27G1147 Fragaria x ananassa
FvH4_2g34000 Fragaria vesca
FvH4_5g00630 Fragaria vesca
Glyma.11G253400 Glycine max
Glyma.14G084900 Glycine max
Glyma.17G239900 Glycine max
Glyma.18G003600 Glycine max
Gohir.A06G020600 Gossypium hirsutum
Gohir.A11G213100 Gossypium hirsutum
Gohir.D06G019000 Gossypium hirsutum
Gohir.D11G210100 Gossypium hirsutum
Gorai.003G099900 Gossypium raimondii
Gorai.007G225400 Gossypium raimondii
Gorai.010G022000 Gossypium raimondii
HanXRQChr09g0266771 Helianthus annuus
HanXRQChr13g0404681 Helianthus annuus
HanXRQChr13g0404691 Helianthus annuus
HanXRQChr13g0404781 Helianthus annuus
HanXRQChr13g0413381 Helianthus annuus
Haze_08609 Corylus avellana
Haze_18049 Corylus avellana
Hma1.2p1_1176F.1_g264220 Hydrangea macrophylla
HPP92_010375 Vanilla planifolia
HPP92_026430 Vanilla planifolia
HPP92_026431 Vanilla planifolia
Hund14646 Selenicereus undatus
Lalb_Chr08g0230551 Lupinus albus
Lalb_Chr22g0355011 Lupinus albus
Lj3g0022076 Lotus japonicus
Lj4C62T10 Lonicera japonica
Lj5g0009773 Lotus japonicus
Lj8P572T6 Lonicera japonica
Lsat_1_v5_gn_4_127200 Lactuca sativa
Lsat_1_v5_gn_6_71681 Lactuca sativa
Manes.02G096400 Manihot esculenta
Manes.05G176100 Manihot esculenta
Mapoly0048s0102 Marchantia polymorpha
Mapoly0049s0076 Marchantia polymorpha
Mapoly0085s0068 Marchantia polymorpha
MBI04_g26966_MAGBIO Magnolia biondii
MD08G1095900 Malus domestica
MD09G1283800 Malus domestica
MD15G1078700 Malus domestica
MD15G1078800 Malus domestica
Medtr1g015930 Medicago truncatula
Medtr1g019050 Medicago truncatula
Medtr3g084750 Medicago truncatula
MELO3C013980.2 Cucumis melo
MELO3C016779.2 Cucumis melo
Migut.C00545 Erythranthe guttata
Migut.D02404 Erythranthe guttata
Migut.D02420 Erythranthe guttata
MSTRG.1064 Avicennia marina
MSTRG.18780 Avicennia marina
Nitab4.5_0000171g0090 Nicotiana tabacum
Nitab4.5_0001989g0060 Nicotiana tabacum
Nitab4.5_0009809g0010 Nicotiana tabacum
Nitab4.5_0012614g0010 Nicotiana tabacum
Nn1g04774 Nelumbo nucifera
Nn4g26369 Nelumbo nucifera
Nn5g30367 Nelumbo nucifera
Oeu009776.1 Olea europaea
Oeu035582.1 Olea europaea
Os04g0464600 Oryza sativa ssp. japonica
Os06g0166200 Oryza sativa ssp. japonica
Peaxi162Scf00120g01119 Petunia axillaris
PGR031G2094 Punica granatum
PGR042G2998 Punica granatum
PGSC0003DMG400000998 Solanum tuberosum
PGSC0003DMG400001519 Solanum tuberosum
Phvul.001G023900 Phaseolus vulgaris
Phvul.001G264600 Phaseolus vulgaris
Potri.003G114700 Populus trichocarpa
Potri.014G025100 Populus trichocarpa
Pp3c10_1440 Physcomitrium patens
Pp3c23_7520 Physcomitrium patens
Pp3c2_19390 Physcomitrium patens
Prupe.1G431900 Prunus persica
Prupe.2G054400 Prunus persica
Prupe.2G054600 Prunus persica
Prupe.5G079100 Prunus persica
Psat0s3398g0320 Pisum sativum
Psat0s5486g0080 Pisum sativum
Psat3g027320 Pisum sativum
Psat5g100480 Pisum sativum
Psat6g021240 Pisum sativum
PSO339G2077 Papaver somniferum
PSO541G4569 Papaver somniferum
PSO675G6143 Papaver somniferum
QL02p004196 Quercus lobata
QL05p029977 Quercus lobata
QL08p053469 Quercus lobata
QL09p007888 Quercus lobata
QL12p015077 Quercus lobata
RcHm_v2.0_Chr6g0308381 Rosa chinensis
RcHm_v2.0_Chr7g0201631 Rosa chinensis
Rhsim06G0053200 Rhododendron simsii
Rhsim07G0101800 Rhododendron simsii
Sabra03G0079500 Salix brachista
Sabra14G0017100 Salix brachista
SalBow1G1997 Salvia bowleyana
SalBow5G0262 Salvia bowleyana
SalBow5G3978 Salvia bowleyana
SalBow6G0019 Salvia bowleyana
SalBow6G6144 Salvia bowleyana
SalBow7G1742 Salvia bowleyana
SalBow7G3944 Salvia bowleyana
Sc01g0009230 Simmondsia chinensis
Sc02g0007390 Simmondsia chinensis
Sed0011330 Sechium edule
Sed0026639 Sechium edule
SEGI_05062 Sequoiadendron giganteum
SEGI_20592 Sequoiadendron giganteum
SEGI_36271 Sequoiadendron giganteum
SGA_v2.0_scaffold324G48664 Striga asiatica
SGA_v2.0_scaffold7G03989 Striga asiatica
SHI10380 Sapria himalayana
SMO164G0064 Selaginella moellendorffii
SMO172G0037 Selaginella moellendorffii
SMO353G0301 Selaginella moellendorffii
Solyc11g150100.1 Solanum lycopersicum
Sopen02g027430 Solanum pennellii
Sopen11g002170 Solanum pennellii
Sp6g05320 Schrenkiella parvula
Sp6g14250 Schrenkiella parvula
TAR375G0682 Trochodendron aralioides
TAR381G0369 Trochodendron aralioides
TAR625G1424 Trochodendron aralioides
THA.LOC104806346 Tarenaya hassleriana
Thecc.03G261300 Theobroma cacao
Thecc.08G002900 Theobroma cacao
Thhalv10016089m.g Eutrema salsugineum
Thhalv10028747m.g Eutrema salsugineum
TPR.G18085 Trifolium pratense
TPR.G3802 Trifolium pratense
TWI56G0433 Tripterygium wilfordii
unitig_37.g12950 Utricularia gibba
unitig_746.g26609 Utricularia gibba
vmacro14044 Vaccinium macrocarpon
vmacro17465 Vaccinium macrocarpon
vmacro21497 Vaccinium macrocarpon
VMungo0647G2496 Vigna mungo
VMungo1383G0048 Vigna mungo
Zm00001eb080470 Zea mays
Zm00001eb271500 Zea mays

User provided reference genes

Program Settings