Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia04757 Actinidia chinensis
Actinidia04758 Actinidia chinensis
Actinidia04759 Actinidia chinensis
Actinidia10641 Actinidia chinensis
Actinidia17782 Actinidia chinensis
Actinidia17783 Actinidia chinensis
Actinidia27492 Actinidia chinensis
Actinidia29536 Actinidia chinensis
Actinidia29537 Actinidia chinensis
Actinidia29538 Actinidia chinensis
Ah.05g168020 Amaranthus hybridus
Ah.05g168030 Amaranthus hybridus
Ah.05g168050 Amaranthus hybridus
Ah.05g168060 Amaranthus hybridus
Ah.05g177050 Amaranthus hybridus
Aqoxy5G02058 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea
ATR0820G076 Amborella trichopoda
Atru.chr13.2082 Acer truncatum
AUR62014500 Chenopodium quinoa
AUR62014501 Chenopodium quinoa
AUR62026683 Chenopodium quinoa
AUR62026684 Chenopodium quinoa
AUR62026685 Chenopodium quinoa
AUR62026686 Chenopodium quinoa
AUR62035549 Chenopodium quinoa
AUR62038034 Chenopodium quinoa
AUR62038035 Chenopodium quinoa
AUR62038037 Chenopodium quinoa
AUR62038038 Chenopodium quinoa
AUR62040592 Chenopodium quinoa
AUR62040594 Chenopodium quinoa
AUR62040595 Chenopodium quinoa
AUR62040599 Chenopodium quinoa
CAN.G264.1 Capsicum annuum
CAN.G264.2 Capsicum annuum
CAN.G264.3 Capsicum annuum
CAN.G264.4 Capsicum annuum
Ca_12311_v3 Cicer arietinum L.
Ca_23081_v3 Cicer arietinum L.
Cc10_g14940 Coffea canephora
Cc10_g14960 Coffea canephora
Cfa018310 Carpinus fangiana
Ciclev10002644m.g Citrus clementina
Ciclev10002747m.g Citrus clementina
Ciclev10002749m.g Citrus clementina
CiPaw.15G015000 Carya illinoinensis
CiPaw.15G015100 Carya illinoinensis
CiPaw.16G010900 Carya illinoinensis
ClCG08G002100 Citrullus lanatus
COL.COLO4_29858 Corchorus olitorius
COL.COLO4_29859 Corchorus olitorius
Cpa.g.sc21.214 Carica papaya
CsaV3_6G002580 Cucumis sativus L.
CSS0043717 Camellia sinensis var. sinensis
Dinv25878 Davidia involucrata
Dinv41066 Davidia involucrata
Duzib093G1472 Durio zibethinus
Duzib116G0596 Durio zibethinus
EL10Ac1g00648 Beta vulgaris
EL10Ac1g01569 Beta vulgaris
EL10Ac1g01570 Beta vulgaris
EL10Ac1g01572 Beta vulgaris
EL10Ac1g01573 Beta vulgaris
EL10Ac1g01574 Beta vulgaris
EL10Ac1g01576 Beta vulgaris
EL10Ac1g01577 Beta vulgaris
Eucgr.D00723 Eucalyptus grandis
Eucgr.E02058 Eucalyptus grandis
Eucgr.E02061 Eucalyptus grandis
Eucgr.E02063 Eucalyptus grandis
Eucgr.E02064 Eucalyptus grandis
Eucgr.E02065 Eucalyptus grandis
Eucgr.E02066 Eucalyptus grandis
Eucgr.E02067 Eucalyptus grandis
Eucgr.E02068 Eucalyptus grandis
Eucgr.E02069 Eucalyptus grandis
Eucgr.E02070 Eucalyptus grandis
Eucgr.E02071 Eucalyptus grandis
Eucgr.F02697 Eucalyptus grandis
Eucgr.F04219 Eucalyptus grandis
Eucgr.L02884 Eucalyptus grandis
FAN15G0525 Fragaria x ananassa
FAN24G2761 Fragaria x ananassa
FvH4_2g13410 Fragaria vesca
Glyma.10G224300 Glycine max
Glyma.16G166600 Glycine max
Glyma.20G167500 Glycine max
GSVIVG01034550001 Vitis vinifera
Haze_17769 Corylus avellana
Haze_17772 Corylus avellana
Haze_17773 Corylus avellana
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla
HPP92_005745 Vanilla planifolia
HPP92_009298 Vanilla planifolia
Hund17173 Selenicereus undatus
Hund26690 Selenicereus undatus
Hund26910 Selenicereus undatus
Lalb_Chr02g0141411 Lupinus albus
Lalb_Chr03g0035371 Lupinus albus
Lalb_Chr19g0130221 Lupinus albus
Lj2g0004069 Lotus japonicus
Lj5g0010855 Lotus japonicus
Lsat_1_v5_gn_9_41200 Lactuca sativa
Manes.02G180800 Manihot esculenta
Manes.02G181000 Manihot esculenta
Manes.18G093201 Manihot esculenta
MBI07_g22283_MAGBIO Magnolia biondii
MBI09_g02187_MAGBIO Magnolia biondii
MBI09_g20569_MAGBIO Magnolia biondii
MBI09_g23867_MAGBIO Magnolia biondii
MBI09_g23868_MAGBIO Magnolia biondii
MD05G1028100 Malus domestica
MD10G1029000 Malus domestica
MD10G1029100 Malus domestica
Medtr0583s0010 Medicago truncatula
Medtr1g098680 Medicago truncatula
Medtr6g037220 Medicago truncatula
MELO3C025026.2 Cucumis melo
Migut.C00980 Erythranthe guttata
Migut.C00982 Erythranthe guttata
Migut.C00983 Erythranthe guttata
Migut.I00192 Erythranthe guttata
Migut.N01982 Erythranthe guttata
Migut.N01983 Erythranthe guttata
Migut.N02014 Erythranthe guttata
Migut.N02015 Erythranthe guttata
MSTRG.1094 Avicennia marina
MSTRG.25309 Avicennia marina
Nitab4.5_0001187g0070 Nicotiana tabacum
Nitab4.5_0001187g0080 Nicotiana tabacum
Nitab4.5_0001187g0090 Nicotiana tabacum
Nitab4.5_0002764g0010 Nicotiana tabacum
Nitab4.5_0002764g0050 Nicotiana tabacum
Nn5g28772 Nelumbo nucifera
Oeu046047.1 Olea europaea
Oeu046050.1 Olea europaea
Os01g0959100 Oryza sativa ssp. japonica
Os01g0959200 Oryza sativa ssp. japonica
Os01g0963600 Oryza sativa ssp. japonica
Os02g0543000 Oryza sativa ssp. japonica
Os11g0167800 Oryza sativa ssp. japonica
Peaxi162Scf00599g00009 Petunia axillaris
Peaxi162Scf00599g00115 Petunia axillaris
Peaxi162Scf01294g00118 Petunia axillaris
PGR042G1359 Punica granatum
PGR044G2207 Punica granatum
PGR044G2425 Punica granatum
PGSC0003DMG400006661 Solanum tuberosum
PGSC0003DMG400006662 Solanum tuberosum
PGSC0003DMG400006663 Solanum tuberosum
PGSC0003DMG400024093 Solanum tuberosum
Phvul.004G094600 Phaseolus vulgaris
Potri.005G193600 Populus trichocarpa
Potri.005G193800 Populus trichocarpa
Potri.005G193901 Populus trichocarpa
Prupe.6G160200 Prunus persica
Prupe.8G034100 Prunus persica
Prupe.8G034200 Prunus persica
Psat1g101880 Pisum sativum
Psat6g192400 Pisum sativum
QL02p029925 Quercus lobata
QL02p029929 Quercus lobata
QL02p038867 Quercus lobata
RcHm_v2.0_Chr6g0274981 Rosa chinensis
Rhsim11G0084200 Rhododendron simsii
Rhsim11G0084300 Rhododendron simsii
Rhsim11G0084400 Rhododendron simsii
Rhsim11G0084500 Rhododendron simsii
Rhsim11G0084600 Rhododendron simsii
Rhsim11G0084700 Rhododendron simsii
Rhsim11G0084800 Rhododendron simsii
Rhsim11G0084900 Rhododendron simsii
Rhsim11G0085000 Rhododendron simsii
Rhsim11G0085100 Rhododendron simsii
Rhsim11G0085200 Rhododendron simsii
Rhsim13G0015600 Rhododendron simsii
Rhsim13G0037600 Rhododendron simsii
Sc02g0003910 Simmondsia chinensis
Sc20g0003600 Simmondsia chinensis
Sc26g0002490 Simmondsia chinensis
Sc26g0002500 Simmondsia chinensis
Sc26g0002520 Simmondsia chinensis
Sc26g0002530 Simmondsia chinensis
Sc26g0003520 Simmondsia chinensis
Sed0017062 Sechium edule
SEGI_08871 Sequoiadendron giganteum
SEGI_09931 Sequoiadendron giganteum
SEGI_17221 Sequoiadendron giganteum
SEGI_23588 Sequoiadendron giganteum
SEGI_40905 Sequoiadendron giganteum
SGA_v2.0_scaffold195G40794 Striga asiatica
SMO351G0439 Selaginella moellendorffii
Solyc04g071580.3 Solanum lycopersicum
Solyc04g071590.3 Solanum lycopersicum
Solyc04g071600.3 Solanum lycopersicum
Solyc04g071610.4 Solanum lycopersicum
Sopen04g027560 Solanum pennellii
Sopen04g027570 Solanum pennellii
Sopen04g027580 Solanum pennellii
Sopen04g027590 Solanum pennellii
Sopen04g027610 Solanum pennellii
TAR381G0478 Trochodendron aralioides
TAR381G0746 Trochodendron aralioides
TAR381G1351 Trochodendron aralioides
TAR625G0538 Trochodendron aralioides
TAR625G0963 Trochodendron aralioides
THA.LOC104809205 Tarenaya hassleriana
Thecc.08G154600 Theobroma cacao
TPR.G22164 Trifolium pratense
TPR.G31183 Trifolium pratense
TWI34G0242 Tripterygium wilfordii
TWI34G0839 Tripterygium wilfordii
TWI34G1982 Tripterygium wilfordii
unitig_747.g21665 Utricularia gibba
vmacro01460 Vaccinium macrocarpon
vmacro01464 Vaccinium macrocarpon
vmacro01467 Vaccinium macrocarpon
vmacro01468 Vaccinium macrocarpon
vmacro01469 Vaccinium macrocarpon
vmacro02689 Vaccinium macrocarpon
vmacro02690 Vaccinium macrocarpon
vmacro02691 Vaccinium macrocarpon
vmacro12405 Vaccinium macrocarpon
vmacro12406 Vaccinium macrocarpon
vmacro23419 Vaccinium macrocarpon
vmacro23421 Vaccinium macrocarpon
vmacro23422 Vaccinium macrocarpon
VMungo0464G0511 Vigna mungo
Zm00001eb083180 Zea mays
Zm00001eb091920 Zea mays
Zm00001eb243310 Zea mays
Zm00001eb263060 Zea mays
Zm00001eb362480 Zea mays
Zm00001eb407710 Zea mays

User provided reference genes

Program Settings