Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16900 Brassica napus
A09p09580 Brassica napus
Aa31LG11G5530 Aethionema arabicum
Aa31LG1G15560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3274 Anthoceros agrestis
Actinidia16481 Actinidia chinensis
Actinidia31701 Actinidia chinensis
Ah.03g145010 Amaranthus hybridus
AL8G44330 Arabidopsis lyrata
Aqoxy5G01226 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.43A3FA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5ITW1B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6G54S4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7TC4IV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5JFP2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1IQ00 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MHSG3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZJ6HJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0XNQ4 Arachis hypogaea
AT5G67030 Arabidopsis thaliana
ATR0605G380 Amborella trichopoda
ATR1126G066 Amborella trichopoda
Atru.chr11.2692 Acer truncatum
Atru.chr3.325 Acer truncatum
AUR62001926 Chenopodium quinoa
AUR62003884 Chenopodium quinoa
BcaB02g09963 Brassica carinata
BcaB04g20078 Brassica carinata
BcaC04g23185 Brassica carinata
BcaC04g23187 Brassica carinata
BcaC04g23188 Brassica carinata
BcaC06g34781 Brassica carinata
BcaC07g42513 Brassica carinata
BolC7t42992H Brassica oleracea
BolC9t54020H Brassica oleracea
BraA07t29416Z Brassica rapa
BraA09t36606Z Brassica rapa
C07p24710 Brassica napus
C09p11330 Brassica napus
CAN.G660.9 Capsicum annuum
CANSAT01G1312 Cannabis sativa
CARHR036590 Cardamine hirsuta
CARHR126560 Cardamine hirsuta
CARHR217720 Cardamine hirsuta
CARHR280630 Cardamine hirsuta
Carub.0008s2747 Capsella rubella
Ca_22162_v3 Cicer arietinum L.
Ca_24768_v3 Cicer arietinum L.
CBR_g2783 Chara braunii
CBR_g38560 Chara braunii
CBR_g49055 Chara braunii
Cc07_g06010 Coffea canephora
CDE10G0029 Ceratophyllum demersum
Cfa001619 Carpinus fangiana
Cfa004025 Carpinus fangiana
Cfa021655 Carpinus fangiana
Cfa023657 Carpinus fangiana
Cfa025044 Carpinus fangiana
Cfa025425 Carpinus fangiana
Cfa025840 Carpinus fangiana
Cfa027020 Carpinus fangiana
Ciclev10025089m.g Citrus clementina
Ciclev10027323m.g Citrus clementina
CiPaw.01G017900 Carya illinoinensis
ClCG02G012500 Citrullus lanatus
COL.COLO4_11419 Corchorus olitorius
Cpa.g.sc55.146 Carica papaya
Cre02.g082550 Chlamydomonas reinhardtii
Cre12.g493700 Chlamydomonas reinhardtii
Cre12.g531250 Chlamydomonas reinhardtii
CsaV3_2G016630 Cucumis sativus L.
CSS0022842 Camellia sinensis var. sinensis
CSS0031288 Camellia sinensis var. sinensis
CSS0041624 Camellia sinensis var. sinensis
DCAR_015695 Daucus carota
DCAR_025735 Daucus carota
Dinv05186 Davidia involucrata
Dinv05450 Davidia involucrata
Dinv30763 Davidia involucrata
Dinv32074 Davidia involucrata
Dinv39845 Davidia involucrata
Dinv39846 Davidia involucrata
Dinv43928 Davidia involucrata
Duzib128G1671 Durio zibethinus
Duzib147G1525 Durio zibethinus
Duzib187G0827 Durio zibethinus
ECA236G1248 Erigeron canadensis
ECA246G0578 Erigeron canadensis
EL10Ac6g15742 Beta vulgaris
Eucgr.I00922 Eucalyptus grandis
Eucgr.I00923 Eucalyptus grandis
FAN19G0778 Fragaria x ananassa
FAN23G1030 Fragaria x ananassa
FAN26G1304 Fragaria x ananassa
FAN28G1157 Fragaria x ananassa
FvH4_1g16080 Fragaria vesca
Glyma.01G186202 Glycine max
Glyma.09G000600 Glycine max
Glyma.11G055700 Glycine max
Glyma.12G240501 Glycine max
Glyma.17G174500 Glycine max
Gohir.A11G192600 Gossypium hirsutum
Gohir.D11G199300 Gossypium hirsutum
Gorai.007G213500 Gossypium raimondii
GSVIVG01001372001 Vitis vinifera
GSVIVG01022128001 Vitis vinifera
HanXRQChr04g0117341 Helianthus annuus
HanXRQChr12g0378831 Helianthus annuus
Haze_15395 Corylus avellana
Haze_15396 Corylus avellana
Hma1.2p1_0017F.1_g011360 Hydrangea macrophylla
HPP92_010971 Vanilla planifolia
Hund16322 Selenicereus undatus
Lalb_Chr00c02g0404101 Lupinus albus
Lalb_Chr01g0008141 Lupinus albus
Lalb_Chr16g0378561 Lupinus albus
Lj2g0007356 Lotus japonicus
Lj3g0027459 Lotus japonicus
Lj4C149T12 Lonicera japonica
Lj4g0006017 Lotus japonicus
Lj9A623T47 Lonicera japonica
Lj9A623T48 Lonicera japonica
Lsat_1_v5_gn_3_90761 Lactuca sativa
Lsat_1_v5_gn_9_111181 Lactuca sativa
Manes.10G150700 Manihot esculenta
Manes.13G124100 Manihot esculenta
Mapoly0028s0084 Marchantia polymorpha
MBI01_g01345_MAGBIO Magnolia biondii
MBI01_g33890_MAGBIO Magnolia biondii
MBI03_g13473_MAGBIO Magnolia biondii
MCO01G125 Micromonas commoda
MCO01G680 Micromonas commoda
MCO04G264 Micromonas commoda
MCO08G194 Micromonas commoda
MCO13G205 Micromonas commoda
MCO13G643 Micromonas commoda
MCO16G227 Micromonas commoda
MD02G1172400 Malus domestica
MD02G1318300 Malus domestica
MD07G1003000 Malus domestica
MD15G1284500 Malus domestica
Medtr3g465900 Medicago truncatula
Medtr4g022850 Medicago truncatula
Medtr4g134870 Medicago truncatula
Medtr5g017300 Medicago truncatula
Medtr5g017350 Medicago truncatula
Medtr5g017370 Medicago truncatula
MELO3C020872.2 Cucumis melo
Migut.B01363 Erythranthe guttata
Migut.B01365 Erythranthe guttata
Migut.H00431 Erythranthe guttata
Migut.K00348 Erythranthe guttata
Migut.K00767 Erythranthe guttata
MSTRG.23744 Avicennia marina
MSTRG.2882 Avicennia marina
Nitab4.5_0002016g0120 Nicotiana tabacum
Nitab4.5_0002440g0040 Nicotiana tabacum
Nn4g23554 Nelumbo nucifera
Nn5g30293 Nelumbo nucifera
Oeu018405.1 Olea europaea
Oeu031955.2 Olea europaea
Os04g0448900 Oryza sativa ssp. japonica
Os04g0448950 Oryza sativa ssp. japonica
Peaxi162Scf00450g00316 Petunia axillaris
PGR004G0880 Punica granatum
PGSC0003DMG400004020 Solanum tuberosum
Phvul.002G018700 Phaseolus vulgaris
Phvul.003G243800 Phaseolus vulgaris
Phvul.011G214600 Phaseolus vulgaris
Potri.001G229100 Populus trichocarpa
Potri.005G138400 Populus trichocarpa
Potri.007G044300 Populus trichocarpa
Potri.009G023001 Populus trichocarpa
Pp3c12_10330 Physcomitrium patens
Pp3c23_5410 Physcomitrium patens
Pp3c3_7450 Physcomitrium patens
Pp3c4_13840 Physcomitrium patens
Pp3c5_21230 Physcomitrium patens
PRCOL_00000700 Prasinoderma coloniale
PRCOL_00002608 Prasinoderma coloniale
PRCOL_00004396 Prasinoderma coloniale
PRCOL_00004442 Prasinoderma coloniale
Prupe.2G004400 Prunus persica
Prupe.2G004500 Prunus persica
Prupe.7G133100 Prunus persica
Psat0s1281g0080 Pisum sativum
Psat2g167360 Pisum sativum
PSO170G1040 Papaver somniferum
PSO210G3686 Papaver somniferum
PSO384G3105 Papaver somniferum
QL04p000093 Quercus lobata
QL04p003128 Quercus lobata
QL06p041333 Quercus lobata
QL07p005912 Quercus lobata
RcHm_v2.0_Chr2g0105701 Rosa chinensis
RcHm_v2.0_Chr2g0138261 Rosa chinensis
RcHm_v2.0_Chr5g0062961 Rosa chinensis
RcHm_v2.0_Chr5g0062971 Rosa chinensis
RcHm_v2.0_Chr5g0062981 Rosa chinensis
Rhsim10G0117200 Rhododendron simsii
Sabra05G0112100 Salix brachista
Sabra07G0039100 Salix brachista
Sabra16G0136700 Salix brachista
SalBow1G5413 Salvia bowleyana
SalBow5G1901 Salvia bowleyana
Sc07g0000780 Simmondsia chinensis
Sed0019988 Sechium edule
Sed0023782 Sechium edule
Sed0027368 Sechium edule
SEGI_14380 Sequoiadendron giganteum
SEGI_30203 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07306 Striga asiatica
SGA_v2.0_scaffold260G45879 Striga asiatica
SMO134G0128 Selaginella moellendorffii
SMO337G0071 Selaginella moellendorffii
Solyc02g090890.4 Solanum lycopersicum
Sopen02g035540 Solanum pennellii
Sp2g29640 Schrenkiella parvula
TAR376G0016 Trochodendron aralioides
TAR376G0143 Trochodendron aralioides
TAR628G0235 Trochodendron aralioides
TAR628G1519 Trochodendron aralioides
TAR633G2681 Trochodendron aralioides
THA.LOC104819235 Tarenaya hassleriana
Thecc.01G056500 Theobroma cacao
Thhalv10002747m.g Eutrema salsugineum
Thhalv10003769m.g Eutrema salsugineum
TPR.G19064 Trifolium pratense
TPR.G30693 Trifolium pratense
TPR.G30697 Trifolium pratense
TWI09G0920 Tripterygium wilfordii
unitig_27.g25327 Utricularia gibba
vmacro05340 Vaccinium macrocarpon
vmacro13619 Vaccinium macrocarpon
VMungo0251G0371 Vigna mungo
VMungo1127G0209 Vigna mungo
VMungo1215G2613 Vigna mungo
Zm00001eb081460 Zea mays
Zm00001eb081470 Zea mays
Zm00001eb320290 Zea mays
Zm00001eb423570 Zea mays

User provided reference genes

Program Settings