Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48240 Brassica napus
A07p17420 Brassica napus
A09p09950 Brassica napus
Aa31LG1G15080 Aethionema arabicum
Aa31LG9G12830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1266 Anthoceros agrestis
Actinidia19187 Actinidia chinensis
Actinidia29820 Actinidia chinensis
Actinidia35638 Actinidia chinensis
Actinidia38003 Actinidia chinensis
Ah.12g059770 Amaranthus hybridus
AL4G16940 Arabidopsis lyrata
AL8G18340 Arabidopsis lyrata
AL8G44970 Arabidopsis lyrata
Aqoxy6G01120 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5N80LZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.70U8WL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M187UJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MNH7P8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7MLFS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y5TTPR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z11J1Y Arachis hypogaea
AT2G25500 Arabidopsis thaliana
AT5G42770 Arabidopsis thaliana
AT5G66550 Arabidopsis thaliana
ATR0733G126 Amborella trichopoda
Atru.chr13.461 Acer truncatum
Atru.chr3.578 Acer truncatum
AUR62042160 Chenopodium quinoa
AUR62043364 Chenopodium quinoa
BcaB02g10015 Brassica carinata
BcaC02g10809 Brassica carinata
BcaC04g23134 Brassica carinata
BcaC06g31748 Brassica carinata
BcaC06g34717 Brassica carinata
BolC4t23993H Brassica oleracea
BolC7t43057H Brassica oleracea
BolC9t54071H Brassica oleracea
BraA06t27692Z Brassica rapa
BraA07t29463Z Brassica rapa
BraA09t36641Z Brassica rapa
C04p24930 Brassica napus
C07p25340 Brassica napus
C09p11810 Brassica napus
CAN.G1226.23 Capsicum annuum
CAN.G358.95 Capsicum annuum
CANSAT01G1026 Cannabis sativa
CARHR115920 Cardamine hirsuta
CARHR181730 Cardamine hirsuta
Carub.0002s0980 Capsella rubella
Carub.0004s0520 Capsella rubella
Carub.0008s0616 Capsella rubella
Carub.0008s2798 Capsella rubella
Ca_13370_v3 Cicer arietinum L.
Ca_22269_v3 Cicer arietinum L.
Ca_22282_v3 Cicer arietinum L.
CBR_g41481 Chara braunii
Cc07_g09540 Coffea canephora
Cc10_g02790 Coffea canephora
CDE01G0484 Ceratophyllum demersum
CDE04G2647 Ceratophyllum demersum
Cfa018160 Carpinus fangiana
Ciclev10002369m.g Citrus clementina
Ciclev10026398m.g Citrus clementina
CiPaw.01G038800 Carya illinoinensis
CiPaw.01G039400 Carya illinoinensis
CiPaw.16G059200 Carya illinoinensis
ClCG05G018940 Citrullus lanatus
COL.COLO4_22073 Corchorus olitorius
COL.COLO4_26303 Corchorus olitorius
Cpa.g.sc31.71 Carica papaya
Cpa.g.sc31.73 Carica papaya
Cpa.g.sc6.115 Carica papaya
Cre12.g514800 Chlamydomonas reinhardtii
CsaV3_3G045180 Cucumis sativus L.
CsaV3_4G005570 Cucumis sativus L.
CSS0010748 Camellia sinensis var. sinensis
CSS0014659 Camellia sinensis var. sinensis
CSS0030362 Camellia sinensis var. sinensis
CSS0033093 Camellia sinensis var. sinensis
CSS0043554 Camellia sinensis var. sinensis
DCAR_013821 Daucus carota
DCAR_017282 Daucus carota
DCAR_023404 Daucus carota
Dinv13531 Davidia involucrata
Dinv36088 Davidia involucrata
Dinv39423 Davidia involucrata
Duzib041G0567 Durio zibethinus
Duzib093G1715 Durio zibethinus
Duzib147G0991 Durio zibethinus
Duzib187G0235 Durio zibethinus
Duzib187G0471 Durio zibethinus
ECA238G1453 Erigeron canadensis
ECA247G3243 Erigeron canadensis
EL10Ac5g11710 Beta vulgaris
Eucgr.F01889 Eucalyptus grandis
Eucgr.I02441 Eucalyptus grandis
FAN19G0577 Fragaria x ananassa
FAN20G3057 Fragaria x ananassa
FAN23G1178 Fragaria x ananassa
FAN27G1124 Fragaria x ananassa
FAN28G1073 Fragaria x ananassa
FvH4_1g13260 Fragaria vesca
FvH4_2g39740 Fragaria vesca
Glyma.02G056700 Glycine max
Glyma.11G233651 Glycine max
Glyma.14G074402 Glycine max
Glyma.16G139500 Glycine max
Glyma.17G250900 Glycine max
Gohir.A02G165800 Gossypium hirsutum
Gohir.A03G078800 Gossypium hirsutum
Gohir.A05G259300 Gossypium hirsutum
Gohir.D02G094600 Gossypium hirsutum
Gohir.D03G014300 Gossypium hirsutum
Gohir.D05G261300 Gossypium hirsutum
Gorai.003G014500 Gossypium raimondii
Gorai.005G107900 Gossypium raimondii
Gorai.009G273200 Gossypium raimondii
GSVIVG01009717001 Vitis vinifera
GSVIVG01018955001 Vitis vinifera
HanXRQChr04g0105181 Helianthus annuus
HanXRQChr07g0192861 Helianthus annuus
Haze_15085 Corylus avellana
Haze_17958 Corylus avellana
Hma1.2p1_0203F.1_g086310 Hydrangea macrophylla
HPP92_011014 Vanilla planifolia
HPP92_024950 Vanilla planifolia
HPP92_026520 Vanilla planifolia
Lalb_Chr09g0333511 Lupinus albus
Lalb_Chr22g0354731 Lupinus albus
Lj1g0022804 Lotus japonicus
Lj4A39T63 Lonicera japonica
Lj4A787T16 Lonicera japonica
Lj4C201T14 Lonicera japonica
LjContig00448g0003607 Lotus japonicus
Lsat_1_v5_gn_1_18761 Lactuca sativa
Lsat_1_v5_gn_2_76281 Lactuca sativa
Manes.01G134300 Manihot esculenta
Manes.05G159100 Manihot esculenta
Mapoly0003s0236 Marchantia polymorpha
MBI02_g23404_MAGBIO Magnolia biondii
MCO15G276 Micromonas commoda
MD02G1147000 Malus domestica
MD08G1031100 Malus domestica
MD12G1040600 Malus domestica
MD15G1026600 Malus domestica
Medtr1g022295 Medicago truncatula
Medtr8g077570 Medicago truncatula
MELO3C003831.2 Cucumis melo
MELO3C016392.2 Cucumis melo
Migut.H00991 Erythranthe guttata
Migut.N00490 Erythranthe guttata
MSTRG.22302 Avicennia marina
MSTRG.2761 Avicennia marina
Nitab4.5_0000434g0220 Nicotiana tabacum
Nitab4.5_0001385g0130 Nicotiana tabacum
Nitab4.5_0002224g0040 Nicotiana tabacum
Nitab4.5_0004186g0060 Nicotiana tabacum
Nn1g04975 Nelumbo nucifera
Nn5g29622 Nelumbo nucifera
Oeu012879.1 Olea europaea
Oeu063756.1 Olea europaea
Os03g0229600 Oryza sativa ssp. japonica
Os03g0724700 Oryza sativa ssp. japonica
Os11g0549655 Oryza sativa ssp. japonica
Os11g0549695 Oryza sativa ssp. japonica
Peaxi162Scf00366g00019 Petunia axillaris
Peaxi162Scf00931g00118 Petunia axillaris
PGR031G1726 Punica granatum
PGR119G0611 Punica granatum
PGSC0003DMG400003503 Solanum tuberosum
PGSC0003DMG400003734 Solanum tuberosum
Phvul.001G014200 Phaseolus vulgaris
Phvul.003G253800 Phaseolus vulgaris
Potri.007G025000 Populus trichocarpa
Potri.014G196400 Populus trichocarpa
Pp3c12_5080 Physcomitrium patens
Pp3c3_22800 Physcomitrium patens
Prupe.1G378700 Prunus persica
Prupe.7G155200 Prunus persica
Psat4g093000 Pisum sativum
Psat6g008560 Pisum sativum
PSO541G6486 Papaver somniferum
PSO675G3638 Papaver somniferum
PSO675G5124 Papaver somniferum
PSO731G0024 Papaver somniferum
PSO764G0294 Papaver somniferum
QL02p008823 Quercus lobata
QL02p008833 Quercus lobata
QL06p046209 Quercus lobata
RcHm_v2.0_Chr2g0101501 Rosa chinensis
RcHm_v2.0_Chr6g0301121 Rosa chinensis
Rhsim06G0032800 Rhododendron simsii
Rhsim07G0240500 Rhododendron simsii
Rhsim08G0117500 Rhododendron simsii
Sabra07G0022100 Salix brachista
Sabra14G0145600 Salix brachista
SalBow1G6900 Salvia bowleyana
SalBow8G3813 Salvia bowleyana
SalBow8G4929 Salvia bowleyana
Sc02g0006070 Simmondsia chinensis
Sed0014841 Sechium edule
Sed0019320 Sechium edule
Sed0020758 Sechium edule
SEGI_03014 Sequoiadendron giganteum
SEGI_35545 Sequoiadendron giganteum
SGA_v2.0_scaffold189G40370 Striga asiatica
SGA_v2.0_scaffold489G52404 Striga asiatica
SMO118G0051 Selaginella moellendorffii
Solyc02g085290.3 Solanum lycopersicum
Solyc04g080440.4 Solanum lycopersicum
Sopen02g029980 Solanum pennellii
Sopen04g034030 Solanum pennellii
Sp2g07420 Schrenkiella parvula
Sp2g30160 Schrenkiella parvula
TAR376G0488 Trochodendron aralioides
TAR381G0260 Trochodendron aralioides
THA.LOC104821558 Tarenaya hassleriana
THA.LOC104821561 Tarenaya hassleriana
THA.LOC104821562 Tarenaya hassleriana
THA.LOC104822819 Tarenaya hassleriana
THA.LOC104826754 Tarenaya hassleriana
Thecc.01G035000 Theobroma cacao
Thecc.01G035200 Theobroma cacao
Thecc.08G027700 Theobroma cacao
Thhalv10003272m.g Eutrema salsugineum
Thhalv10004849m.g Eutrema salsugineum
TPR.G20174 Trifolium pratense
TPR.G24111 Trifolium pratense
TWI12G1359 Tripterygium wilfordii
TWI73G0687 Tripterygium wilfordii
unitig_21.g20158 Utricularia gibba
vmacro17830 Vaccinium macrocarpon
vmacro20101 Vaccinium macrocarpon
vmacro21646 Vaccinium macrocarpon
vmacro21647 Vaccinium macrocarpon
VMungo0251G1781 Vigna mungo
VMungo0647G2335 Vigna mungo
Zm00001eb009580 Zea mays
Zm00001eb113870 Zea mays
Zm00001eb215810 Zea mays

User provided reference genes

Program Settings