Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10830 Brassica napus
A03p32950 Brassica napus
A10p11190 Brassica napus
Aa31LG5G10000 Aethionema arabicum
Aa31LG9G16900 Aethionema arabicum
Actinidia18105 Actinidia chinensis
Actinidia26314 Actinidia chinensis
Actinidia36291 Actinidia chinensis
AL3G11800 Arabidopsis lyrata
AL7G51680 Arabidopsis lyrata
AL8G28870 Arabidopsis lyrata
Aqoxy3G00629 Aquilegia oxysepala
Aqoxy5G03086 Aquilegia oxysepala
Aqoxy6G00630 Aquilegia oxysepala
Aqoxy6G02621 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNJ358 Arachis hypogaea
AT3G02480 Arabidopsis thaliana
AT5G38760 Arabidopsis thaliana
AT5G53820 Arabidopsis thaliana
Atru.chr10.1869 Acer truncatum
AUR62008938 Chenopodium quinoa
BcaB08g35740 Brassica carinata
BcaC01g04444 Brassica carinata
BcaC01g04554 Brassica carinata
BcaC03g14385 Brassica carinata
BcaC09g47705 Brassica carinata
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus
BolC1t05900H Brassica oleracea
BolC1t05901H Brassica oleracea
BolC2t07926H Brassica oleracea
BolC3t16273H Brassica oleracea
BolC9t57265H Brassica oleracea
BraA02t06145Z Brassica rapa
BraA03t12463Z Brassica rapa
BraA10t43210Z Brassica rapa
BraSC141t45633Z Brassica rapa
C02p17950 Brassica napus
C03p40070 Brassica napus
C09p43800 Brassica napus
CAN.G497.26 Capsicum annuum
CAN.G497.27 Capsicum annuum
CAN.G890.56 Capsicum annuum
CARHR076460 Cardamine hirsuta
CARHR266960 Cardamine hirsuta
CARHR288730 Cardamine hirsuta
Carub.0003s0158 Capsella rubella
Carub.0007s3711 Capsella rubella
Carub.0008s1411 Capsella rubella
Ca_06717_v3 Cicer arietinum L.
Ca_06720_v3 Cicer arietinum L.
Ca_20747_v3 Cicer arietinum L.
Ca_20748_v3 Cicer arietinum L.
Cc00_g21590 Coffea canephora
Cc07_g04790 Coffea canephora
Cfa007988 Carpinus fangiana
Cfa007996 Carpinus fangiana
Cfa018418 Carpinus fangiana
Cfa020560 Carpinus fangiana
Ciclev10013625m.g Citrus clementina
Ciclev10013788m.g Citrus clementina
CiPaw.03G007000 Carya illinoinensis
CiPaw.04G005400 Carya illinoinensis
CiPaw.04G005500 Carya illinoinensis
Cpa.g.sc188.25 Carica papaya
Cpa.g.sc188.26 Carica papaya
CsaV3_5G004610 Cucumis sativus L.
CsaV3_5G004620 Cucumis sativus L.
CsaV3_5G038870 Cucumis sativus L.
CsaV3_5G038880 Cucumis sativus L.
CSS0040391 Camellia sinensis var. sinensis
CSS0045706 Camellia sinensis var. sinensis
CSS0047860 Camellia sinensis var. sinensis
Dinv33894 Davidia involucrata
Dinv33895 Davidia involucrata
Dinv34873 Davidia involucrata
Dinv36852 Davidia involucrata
Dinv38615 Davidia involucrata
Duzib133G1224 Durio zibethinus
Duzib138G1180 Durio zibethinus
Duzib268G0192 Durio zibethinus
EL10Ac2g04705 Beta vulgaris
Eucgr.I02095 Eucalyptus grandis
Eucgr.J01446 Eucalyptus grandis
FAN02G0494 Fragaria x ananassa
FAN05G0873 Fragaria x ananassa
FAN05G4367 Fragaria x ananassa
FAN09G3043 Fragaria x ananassa
FAN09G4276 Fragaria x ananassa
FAN09G4825 Fragaria x ananassa
FvH4_6g45800 Fragaria vesca
FvH4_6g45802 Fragaria vesca
Glyma.08G255700 Glycine max
Glyma.13G050051 Glycine max
Glyma.13G050100 Glycine max
Glyma.18G278600 Glycine max
Glyma.19G040000 Glycine max
GSVIVG01008194001 Vitis vinifera
GSVIVG01036482001 Vitis vinifera
GSVIVG01036492001 Vitis vinifera
HanXRQChr07g0200111 Helianthus annuus
HanXRQChr09g0263341 Helianthus annuus
HanXRQChr14g0448071 Helianthus annuus
Haze_14075 Corylus avellana
Haze_14086 Corylus avellana
Haze_17643 Corylus avellana
Hma1.2p1_0588F.1_g184450 Hydrangea macrophylla
Hma1.2p1_0588F.1_g184500 Hydrangea macrophylla
Hund13793 Selenicereus undatus
Lalb_Chr02g0158511 Lupinus albus
Lalb_Chr04g0258241 Lupinus albus
Lalb_Chr04g0258251 Lupinus albus
Lalb_Chr06g0174781 Lupinus albus
Lalb_Chr17g0336681 Lupinus albus
Lj1g0022638 Lotus japonicus
Lsat_1_v5_gn_2_86260 Lactuca sativa
Lsat_1_v5_gn_4_175141 Lactuca sativa
MD09G1079600 Malus domestica
MD17G1070100 Malus domestica
Medtr6g016575 Medicago truncatula
Medtr7g018280 Medicago truncatula
Medtr7g019290 Medicago truncatula
Medtr7g020780 Medicago truncatula
Medtr7g109750 Medicago truncatula
MELO3C005500.2 Cucumis melo
MELO3C005501.2 Cucumis melo
MELO3C022078.2 Cucumis melo
MELO3C022079.2 Cucumis melo
MELO3C022081.2 Cucumis melo
MELO3C033537.2 Cucumis melo
Migut.H00555 Erythranthe guttata
Migut.H00561 Erythranthe guttata
Migut.K00873 Erythranthe guttata
Migut.N00988 Erythranthe guttata
Migut.N00991 Erythranthe guttata
Nitab4.5_0000612g0030 Nicotiana tabacum
Nitab4.5_0001324g0010 Nicotiana tabacum
Nitab4.5_0003384g0010 Nicotiana tabacum
Nitab4.5_0006224g0060 Nicotiana tabacum
Nitab4.5_0006524g0010 Nicotiana tabacum
Nitab4.5_0012845g0030 Nicotiana tabacum
Nitab4.5_0015566g0010 Nicotiana tabacum
Oeu032858.1 Olea europaea
Oeu049338.1 Olea europaea
Peaxi162Scf00019g00065 Petunia axillaris
Peaxi162Scf00479g00055 Petunia axillaris
Peaxi162Scf00479g00065 Petunia axillaris
Peaxi162Scf00479g00423 Petunia axillaris
Peaxi162Scf00479g00427 Petunia axillaris
Peaxi162Scf01056g00020 Petunia axillaris
PGR042G1695 Punica granatum
PGR042G3018 Punica granatum
PGSC0003DMG400001534 Solanum tuberosum
PGSC0003DMG400010052 Solanum tuberosum
PGSC0003DMG400018773 Solanum tuberosum
Phvul.004G046900 Phaseolus vulgaris
Phvul.004G047000 Phaseolus vulgaris
Phvul.004G047100 Phaseolus vulgaris
Phvul.004G047200 Phaseolus vulgaris
Phvul.004G047300 Phaseolus vulgaris
Phvul.008G022300 Phaseolus vulgaris
Phvul.008G022400 Phaseolus vulgaris
Potri.004G106350 Populus trichocarpa
Potri.004G107100 Populus trichocarpa
Potri.004G107500 Populus trichocarpa
Potri.004G107600 Populus trichocarpa
Potri.004G107800 Populus trichocarpa
Potri.004G107900 Populus trichocarpa
Potri.017G108300 Populus trichocarpa
Potri.017G108350 Populus trichocarpa
Potri.017G108400 Populus trichocarpa
Potri.017G108500 Populus trichocarpa
Prupe.3G244100 Prunus persica
Prupe.3G244200 Prunus persica
Prupe.3G244300 Prunus persica
Prupe.3G244400 Prunus persica
Prupe.3G244500 Prunus persica
Prupe.3G244600 Prunus persica
Prupe.3G244700 Prunus persica
Psat1g063880 Pisum sativum
Psat3g146000 Pisum sativum
Psat3g191840 Pisum sativum
PSO017G1587 Papaver somniferum
PSO017G6817 Papaver somniferum
PSO478G1110 Papaver somniferum
PSO478G1863 Papaver somniferum
RcHm_v2.0_Chr2g0163981 Rosa chinensis
RcHm_v2.0_Chr2g0163991 Rosa chinensis
RcHm_v2.0_Chr2g0164011 Rosa chinensis
Rhsim08G0081200 Rhododendron simsii
Rhsim08G0081300 Rhododendron simsii
Sabra04G0074500 Salix brachista
Sabra04G0074600 Salix brachista
Sabra04G0074800 Salix brachista
Sabra04G0075800 Salix brachista
Sabra17G0090900 Salix brachista
Sabra17G0091100 Salix brachista
SalBow1G4481 Salvia bowleyana
SalBow1G5754 Salvia bowleyana
SalBow1G7560 Salvia bowleyana
Sc10g0001460 Simmondsia chinensis
Sc11g0008050 Simmondsia chinensis
Sc11g0008060 Simmondsia chinensis
Sed0007664 Sechium edule
Sed0008680 Sechium edule
Sed0011149 Sechium edule
Sed0012567 Sechium edule
Sed0018450 Sechium edule
Sed0018699 Sechium edule
Sed0026183 Sechium edule
Sed0026500 Sechium edule
Solyc02g065640.3 Solanum lycopersicum
Solyc02g082990.4 Solanum lycopersicum
Solyc02g089570.3 Solanum lycopersicum
Solyc02g089580.3 Solanum lycopersicum
Solyc02g089590.3 Solanum lycopersicum
Solyc03g046320.4 Solanum lycopersicum
Sopen02g015850 Solanum pennellii
Sopen02g027770 Solanum pennellii
Sopen02g034300 Solanum pennellii
Sopen02g034310 Solanum pennellii
Sopen03g009840 Solanum pennellii
Sp3g01520 Schrenkiella parvula
Sp6g15890 Schrenkiella parvula
SpUn0185_0020 Schrenkiella parvula
THA.LOC109116088 Tarenaya hassleriana
THA.LOC109116670 Tarenaya hassleriana
THA.LOC109116986 Tarenaya hassleriana
THA.LOC109117084 Tarenaya hassleriana
Thecc.04G145300 Theobroma cacao
Thecc.04G146000 Theobroma cacao
Thhalv10015216m.g Eutrema salsugineum
Thhalv10028020m.g Eutrema salsugineum
TWI32G0493 Tripterygium wilfordii
TWI34G1371 Tripterygium wilfordii
vmacro18087 Vaccinium macrocarpon
vmacro18088 Vaccinium macrocarpon
vmacro18089 Vaccinium macrocarpon

User provided reference genes

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