Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28420 Brassica napus
Aa31LG5G16090 Aethionema arabicum
Aa31LG9G11280 Aethionema arabicum
Actinidia03886 Actinidia chinensis
Actinidia03994 Actinidia chinensis
Actinidia03995 Actinidia chinensis
Actinidia22193 Actinidia chinensis
Actinidia37749 Actinidia chinensis
Ah.07g197790 Amaranthus hybridus
AL3G16330 Arabidopsis lyrata
AL6G44850 Arabidopsis lyrata
Aqoxy1G00651 Aquilegia oxysepala
Aqoxy7G00042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0FNG65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MUI8UY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3RAPG Arachis hypogaea
AT3G05675 Arabidopsis thaliana
AT4G10800 Arabidopsis thaliana
ATR0757G155 Amborella trichopoda
ATR0772G218 Amborella trichopoda
Atru.chr8.1349 Acer truncatum
Atru.chr9.1914 Acer truncatum
Atru.chr9.1915 Acer truncatum
AUR62007031 Chenopodium quinoa
AUR62019895 Chenopodium quinoa
AUR62030731 Chenopodium quinoa
AUR62036371 Chenopodium quinoa
BcaB01g01540 Brassica carinata
BcaB04g19245 Brassica carinata
BcaB04g19247 Brassica carinata
BcaC04g21079 Brassica carinata
BcaC04g21080 Brassica carinata
BolC3t16448H Brassica oleracea
BolC3t16449H Brassica oleracea
BolC9t56430H Brassica oleracea
BraA09t38406Z Brassica rapa
C03p41690 Brassica napus
C09p35980 Brassica napus
CAN.G282.13 Capsicum annuum
CAN.G574.4 Capsicum annuum
CAN.G88.13 Capsicum annuum
CANSAT21G1641 Cannabis sativa
CANSAT64G2938 Cannabis sativa
CARHR080120 Cardamine hirsuta
CARHR255800 Cardamine hirsuta
Carub.0003s0501 Capsella rubella
Carub.0006s2957 Capsella rubella
Ca_09060_v3 Cicer arietinum L.
Ca_14215_v3 Cicer arietinum L.
Ca_26366_v3 Cicer arietinum L.
Cc00_g24110 Coffea canephora
Cc06_g06610 Coffea canephora
Cc08_g16580 Coffea canephora
CDE02G3339 Ceratophyllum demersum
CDE04G0085 Ceratophyllum demersum
CDE12G0790 Ceratophyllum demersum
Cfa020035 Carpinus fangiana
Ciclev10011740m.g Citrus clementina
Ciclev10020226m.g Citrus clementina
CiPaw.10G018000 Carya illinoinensis
CiPaw.11G114700 Carya illinoinensis
CiPaw.12G079100 Carya illinoinensis
ClCG01G001620 Citrullus lanatus
ClCG04G005150 Citrullus lanatus
COL.COLO4_10768 Corchorus olitorius
COL.COLO4_29569 Corchorus olitorius
Cpa.g.c33464 Carica papaya
Cpa.g.c35773 Carica papaya
Cpa.g.sc104.26 Carica papaya
Cpa.g.sc15.32 Carica papaya
Cpa.g.sc15.33 Carica papaya
Cpa.g.sc210.6 Carica papaya
CsaV3_4G013470 Cucumis sativus L.
CsaV3_5G001780 Cucumis sativus L.
CSS0009458 Camellia sinensis var. sinensis
CSS0036805 Camellia sinensis var. sinensis
DCAR_006495 Daucus carota
Dinv03435 Davidia involucrata
Dinv09786 Davidia involucrata
Dinv12341 Davidia involucrata
Duzib084G0225 Durio zibethinus
Duzib093G2181 Durio zibethinus
Duzib205G0689 Durio zibethinus
ECA233G4705 Erigeron canadensis
ECA246G1766 Erigeron canadensis
EL10Ac5g12463 Beta vulgaris
EL10Ac5g12973 Beta vulgaris
Eucgr.A02587 Eucalyptus grandis
Eucgr.D01699 Eucalyptus grandis
FAN02G0504 Fragaria x ananassa
FAN04G1202 Fragaria x ananassa
FAN05G2473 Fragaria x ananassa
FAN05G2646 Fragaria x ananassa
FAN07G0927 Fragaria x ananassa
FAN08G2803 Fragaria x ananassa
FAN09G3527 Fragaria x ananassa
FAN12G2865 Fragaria x ananassa
FAN14G2618 Fragaria x ananassa
FAN17G1400 Fragaria x ananassa
FAN18G0892 Fragaria x ananassa
FAN18G2335 Fragaria x ananassa
FAN22G2270 Fragaria x ananassa
FvH4_4g07840 Fragaria vesca
FvH4_5g11380 Fragaria vesca
FvH4_6g20360 Fragaria vesca
Glyma.03G202400 Glycine max
Glyma.04G126600 Glycine max
Glyma.06G312400 Glycine max
Glyma.19G199400 Glycine max
Gohir.A04G057700 Gossypium hirsutum
Gohir.A12G238800 Gossypium hirsutum
Gohir.D04G091500 Gossypium hirsutum
Gohir.D12G239900 Gossypium hirsutum
Gorai.008G257000 Gossypium raimondii
Gorai.009G396800 Gossypium raimondii
GSVIVG01011145001 Vitis vinifera
GSVIVG01019622001 Vitis vinifera
HanXRQChr02g0053241 Helianthus annuus
HanXRQChr17g0534361 Helianthus annuus
HanXRQChr17g0534481 Helianthus annuus
Haze_09131 Corylus avellana
Haze_20175 Corylus avellana
Haze_20179 Corylus avellana
Hma1.2p1_0079F.1_g041773 Hydrangea macrophylla
Hma1.2p1_0079F.1_g041790 Hydrangea macrophylla
Hma1.2p1_0456F.1_g156480 Hydrangea macrophylla
HPP92_000996 Vanilla planifolia
HPP92_022373 Vanilla planifolia
Hund11362 Selenicereus undatus
Hund14962 Selenicereus undatus
Lalb_Chr01g0017861 Lupinus albus
Lalb_Chr15g0079271 Lupinus albus
Lj1g0018446 Lotus japonicus
Lj2E159T0 Lonicera japonica
Lj2P159T18 Lonicera japonica
Lj3A423G40 Lonicera japonica
Lj3A423T50 Lonicera japonica
Lj3C422T5 Lonicera japonica
Lj3C423T16 Lonicera japonica
Lj3C423T18 Lonicera japonica
Lj3C423T19 Lonicera japonica
Lj3C423T20 Lonicera japonica
Lj3C423T6 Lonicera japonica
Lj3g0025610 Lotus japonicus
Lsat_1_v5_gn_6_33500 Lactuca sativa
Manes.09G045700 Manihot esculenta
Manes.10G065100 Manihot esculenta
Mapoly0850s0001 Marchantia polymorpha
MBI04_g36400_MAGBIO Magnolia biondii
MBI12_g10424_MAGBIO Magnolia biondii
MD06G1114200 Malus domestica
MD12G1049200 Malus domestica
MD14G1048100 Malus domestica
MD14G1135500 Malus domestica
Medtr3g011800 Medicago truncatula
Medtr7g106330 Medicago truncatula
MELO3C005775.2 Cucumis melo
MELO3C008785.2 Cucumis melo
Migut.L01829 Erythranthe guttata
MSTRG.26606 Avicennia marina
Nitab4.5_0000077g0070 Nicotiana tabacum
Nitab4.5_0000384g0010 Nicotiana tabacum
Nitab4.5_0001730g0040 Nicotiana tabacum
Nitab4.5_0003163g0080 Nicotiana tabacum
Nn3g21271 Nelumbo nucifera
Nn6g34680 Nelumbo nucifera
Nn6g34681 Nelumbo nucifera
Nn6g34682 Nelumbo nucifera
Oeu013551.1 Olea europaea
Oeu042076.1 Olea europaea
Os06g0129200 Oryza sativa ssp. japonica
Os07g0668800 Oryza sativa ssp. japonica
Peaxi162Scf00349g00063 Petunia axillaris
Peaxi162Scf00910g00220 Petunia axillaris
PGR031G2734 Punica granatum
PGSC0003DMG400021355 Solanum tuberosum
PGSC0003DMG400032128 Solanum tuberosum
Phvul.001G195900 Phaseolus vulgaris
Phvul.005G013400 Phaseolus vulgaris
Potri.001G086100 Populus trichocarpa
Potri.003G144700 Populus trichocarpa
Potri.006G202900 Populus trichocarpa
Potri.016G069566 Populus trichocarpa
Potri.016G069632 Populus trichocarpa
Pp3c20_1690 Physcomitrium patens
Pp3c23_20080 Physcomitrium patens
Pp3c24_16440 Physcomitrium patens
Pp3c8_21540 Physcomitrium patens
Prupe.5G127000 Prunus persica
Prupe.7G094200 Prunus persica
Psat3g028440 Pisum sativum
Psat5g224800 Pisum sativum
PSO063G4504 Papaver somniferum
PSO135G0011 Papaver somniferum
PSO339G0847 Papaver somniferum
PSO384G0833 Papaver somniferum
PSO384G1255 Papaver somniferum
PSO782G0568 Papaver somniferum
QL02p028873 Quercus lobata
QL07p036606 Quercus lobata
RcHm_v2.0_Chr3g0475971 Rosa chinensis
RcHm_v2.0_Chr7g0186491 Rosa chinensis
Rhsim02G0250100 Rhododendron simsii
Rhsim10G0140600 Rhododendron simsii
Sabra01G0062400 Salix brachista
Sabra03G0105300 Salix brachista
Sabra06G0156000 Salix brachista
SalBow5G2621 Salvia bowleyana
Sc01g0005360 Simmondsia chinensis
Sc01g0010530 Simmondsia chinensis
Sed0008026 Sechium edule
Sed0026465 Sechium edule
SEGI_32450 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14017 Striga asiatica
SMO304G0015 Selaginella moellendorffii
Solyc01g005670.3 Solanum lycopersicum
Solyc01g007060.3 Solanum lycopersicum
Sopen01g001680 Solanum pennellii
Sopen01g003040 Solanum pennellii
Sp3g04550 Schrenkiella parvula
Sp6g06700 Schrenkiella parvula
TAR369G0763 Trochodendron aralioides
TAR374G1250 Trochodendron aralioides
THA.LOC104815194 Tarenaya hassleriana
THA.LOC104816643 Tarenaya hassleriana
Thecc.03G224100 Theobroma cacao
Thecc.05G105100 Theobroma cacao
Thhalv10020747m.g Eutrema salsugineum
Thhalv10028868m.g Eutrema salsugineum
Thhalv10029255m.g Eutrema salsugineum
TPR.G24701 Trifolium pratense
TPR.G30406 Trifolium pratense
TPR.G31298 Trifolium pratense
TWI15G0059 Tripterygium wilfordii
TWI74G0042 Tripterygium wilfordii
unitig_578.g16357 Utricularia gibba
unitig_8.g4977 Utricularia gibba
vmacro12836 Vaccinium macrocarpon
VMungo1080G0036 Vigna mungo
VMungo1383G3695 Vigna mungo
Zm00001eb320450 Zea mays
Zm00001eb378460 Zea mays

User provided reference genes

Program Settings