Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31240 Brassica napus
A05p00480 Brassica napus
A09p01560 Brassica napus
A09p54440 Brassica napus
Aa31LG10G16390 Aethionema arabicum
Aa31LG1G28750 Aethionema arabicum
Aa31LG5G1740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1437 Anthoceros agrestis
Actinidia21005 Actinidia chinensis
Actinidia21411 Actinidia chinensis
Actinidia25842 Actinidia chinensis
Actinidia27611 Actinidia chinensis
Ah.02g112170 Amaranthus hybridus
Ah.11g049340 Amaranthus hybridus
AL1G11990 Arabidopsis lyrata
AL4G19520 Arabidopsis lyrata
AL4G47000 Arabidopsis lyrata
AL5G45320 Arabidopsis lyrata
AL6G51130 Arabidopsis lyrata
Aqoxy2G02786 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2IHJ4M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4335NN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LG3T8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4HK2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UJ0Y8W Arachis hypogaea
AT1G02650 Arabidopsis thaliana
AT2G47440 Arabidopsis thaliana
AT3G62570 Arabidopsis thaliana
AT4G02100 Arabidopsis thaliana
ATR0706G245 Amborella trichopoda
Atru.chr5.1035 Acer truncatum
AUR62011829 Chenopodium quinoa
AUR62024672 Chenopodium quinoa
BcaB01g02077 Brassica carinata
BcaB01g02420 Brassica carinata
BcaB02g08771 Brassica carinata
BcaB06g29437 Brassica carinata
BcaC01g06776 Brassica carinata
BcaC02g12579 Brassica carinata
BcaC02g12791 Brassica carinata
BcaC02g12792 Brassica carinata
BcaC04g24038 Brassica carinata
BcaC07g40732 Brassica carinata
BcaC07g42767 Brassica carinata
BcaNung06528 Brassica carinata
BolC3t16095H Brassica oleracea
BolC8t51311H Brassica oleracea
BolC9t53100H Brassica oleracea
BraA03t12304Z Brassica rapa
BraA05t19046Z Brassica rapa
BraA09t35815Z Brassica rapa
BraA09t40857Z Brassica rapa
C03p38080 Brassica napus
C04p00430 Brassica napus
C08p37330 Brassica napus
C09p01660 Brassica napus
CAN.G1280.24 Capsicum annuum
CAN.G362.45 Capsicum annuum
CANSAT25G3135 Cannabis sativa
CARHR142830 Cardamine hirsuta
CARHR172820 Cardamine hirsuta
CARHR249540 Cardamine hirsuta
Carub.0001s0170 Capsella rubella
Carub.0005s2922 Capsella rubella
Carub.0006s3512 Capsella rubella
Ca_09203_v3 Cicer arietinum L.
Ca_10291_v3 Cicer arietinum L.
Cc01_g21290 Coffea canephora
CDE01G0189 Ceratophyllum demersum
CDE02G1279 Ceratophyllum demersum
CDE08G1020 Ceratophyllum demersum
CDE12G0523 Ceratophyllum demersum
Cfa005816 Carpinus fangiana
Ciclev10019452m.g Citrus clementina
CiPaw.07G116100 Carya illinoinensis
CiPaw.08G090900 Carya illinoinensis
ClCG04G005660 Citrullus lanatus
ClCG09G005190 Citrullus lanatus
ClCG10G011310 Citrullus lanatus
COL.COLO4_23250 Corchorus olitorius
Cpa.g.sc18.24 Carica papaya
CsaV3_4G001140 Cucumis sativus L.
CsaV3_7G029880 Cucumis sativus L.
CSS0004585 Camellia sinensis var. sinensis
CSS0010263 Camellia sinensis var. sinensis
CSS0016763 Camellia sinensis var. sinensis
DCAR_002903 Daucus carota
DCAR_005770 Daucus carota
DCAR_012368 Daucus carota
DCAR_018311 Daucus carota
Dinv10082 Davidia involucrata
Dinv33108 Davidia involucrata
Duzib133G1453 Durio zibethinus
Duzib138G1762 Durio zibethinus
ECA236G5024 Erigeron canadensis
ECA247G2562 Erigeron canadensis
EL10As5g23509 Beta vulgaris
Eucgr.H01056 Eucalyptus grandis
Eucgr.K03539 Eucalyptus grandis
FAN04G1014 Fragaria x ananassa
FAN08G3321 Fragaria x ananassa
FAN18G4060 Fragaria x ananassa
FvH4_5g39440 Fragaria vesca
Glyma.02G013402 Glycine max
Glyma.03G218600 Glycine max
Glyma.10G014000 Glycine max
Glyma.19G215400 Glycine max
Gohir.A07G127700 Gossypium hirsutum
Gohir.A08G119100 Gossypium hirsutum
Gohir.A11G110100 Gossypium hirsutum
Gohir.A12G126100 Gossypium hirsutum
Gohir.D07G132100 Gossypium hirsutum
Gohir.D08G139800 Gossypium hirsutum
Gohir.D11G115300 Gossypium hirsutum
Gohir.D12G129600 Gossypium hirsutum
Gorai.001G143300 Gossypium raimondii
Gorai.004G143900 Gossypium raimondii
Gorai.007G123400 Gossypium raimondii
Gorai.008G140700 Gossypium raimondii
GSVIVG01028103001 Vitis vinifera
HanXRQChr06g0167841 Helianthus annuus
HanXRQChr10g0285371 Helianthus annuus
HanXRQChr15g0464171 Helianthus annuus
HanXRQChr15g0464991 Helianthus annuus
Haze_05022 Corylus avellana
Haze_05026 Corylus avellana
Hma1.2p1_0212F.1_g090020 Hydrangea macrophylla
HPP92_001160 Vanilla planifolia
HPP92_002053 Vanilla planifolia
Hund02935 Selenicereus undatus
Hund09620 Selenicereus undatus
Lalb_Chr02g0146761 Lupinus albus
Lalb_Chr04g0259921 Lupinus albus
Lalb_Chr04g0259931 Lupinus albus
Lalb_Chr06g0166811 Lupinus albus
Lalb_Chr15g0078311 Lupinus albus
Lalb_Chr18g0046781 Lupinus albus
Lalb_Chr21g0309531 Lupinus albus
Lj1A18T24 Lonicera japonica
Lj1g0007373 Lotus japonicus
Lj5g0008118 Lotus japonicus
Lsat_1_v5_gn_8_165980 Lactuca sativa
Lsat_1_v5_gn_9_3020 Lactuca sativa
Manes.01G226700 Manihot esculenta
Manes.05G002400 Manihot esculenta
Mapoly0004s0166 Marchantia polymorpha
MBI18_g28450_MAGBIO Magnolia biondii
MD03G1296600 Malus domestica
MD11G1316100 Malus domestica
Medtr1g038470 Medicago truncatula
Medtr1g087270 Medicago truncatula
Medtr3g102140 Medicago truncatula
Medtr7g109360 Medicago truncatula
Medtr8g064210 Medicago truncatula
Medtr8g064220 Medicago truncatula
MELO3C015933.2 Cucumis melo
MELO3C017924.2 Cucumis melo
Migut.D00091 Erythranthe guttata
MSTRG.18110 Avicennia marina
MSTRG.21678 Avicennia marina
Nitab4.5_0000363g0310 Nicotiana tabacum
Nitab4.5_0001301g0110 Nicotiana tabacum
Nitab4.5_0006144g0050 Nicotiana tabacum
Nitab4.5_0012124g0010 Nicotiana tabacum
Nn2g14179 Nelumbo nucifera
Nn3g21653 Nelumbo nucifera
Nn4g25636 Nelumbo nucifera
Nn4g26514 Nelumbo nucifera
Nn8g39725 Nelumbo nucifera
Oeu008462.1 Olea europaea
Oeu014949.1 Olea europaea
Oeu021389.1 Olea europaea
Oeu025545.1 Olea europaea
Oeu038014.1 Olea europaea
Oeu047389.1 Olea europaea
Oeu047390.1 Olea europaea
Os03g0304500 Oryza sativa ssp. japonica
Os07g0689800 Oryza sativa ssp. japonica
Peaxi162Scf00001g10217 Petunia axillaris
Peaxi162Scf00058g00294 Petunia axillaris
PGR044G1239 Punica granatum
PGR119G0920 Punica granatum
PGSC0003DMG400007302 Solanum tuberosum
PGSC0003DMG400009035 Solanum tuberosum
Phvul.001G212000 Phaseolus vulgaris
Phvul.007G215200 Phaseolus vulgaris
Potri.002G197300 Populus trichocarpa
Potri.014G122300 Populus trichocarpa
Prupe.8G270600 Prunus persica
Psat3g020200 Pisum sativum
Psat6g162280 Pisum sativum
PSO170G6339 Papaver somniferum
PSO357G0318 Papaver somniferum
QL12p020290 Quercus lobata
RcHm_v2.0_Chr7g0241751 Rosa chinensis
Rhsim01G0290100 Rhododendron simsii
Sabra02G0160200 Salix brachista
Sabra14G0090700 Salix brachista
SalBow2G3579 Salvia bowleyana
SalBow3G2453 Salvia bowleyana
Sc05g0000510 Simmondsia chinensis
Sed0009669 Sechium edule
Sed0009776 Sechium edule
Sed0026598 Sechium edule
SEGI_05541 Sequoiadendron giganteum
SEGI_29731 Sequoiadendron giganteum
SEGI_39845 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41124 Striga asiatica
SGA_v2.0_scaffold334G49059 Striga asiatica
SGA_v2.0_scaffold376G50273 Striga asiatica
SHI20092 Sapria himalayana
Solyc01g079580.3 Solanum lycopersicum
Solyc06g009670.3 Solanum lycopersicum
Sopen01g031360 Solanum pennellii
Sopen06g004310 Solanum pennellii
Sp4g29390 Schrenkiella parvula
Sp5g00930 Schrenkiella parvula
Sp6g01990 Schrenkiella parvula
TAR362G0654 Trochodendron aralioides
TAR633G1885 Trochodendron aralioides
THA.LOC104802196 Tarenaya hassleriana
THA.LOC104815921 Tarenaya hassleriana
THA.LOC104817463 Tarenaya hassleriana
Thecc.01G311400 Theobroma cacao
Thhalv10001383m.g Eutrema salsugineum
Thhalv10005872m.g Eutrema salsugineum
Thhalv10028558m.g Eutrema salsugineum
TPR.G19778 Trifolium pratense
TPR.G20289 Trifolium pratense
TWI18G0577 Tripterygium wilfordii
TWI36G0680 Tripterygium wilfordii
unitig_60.g25657 Utricularia gibba
unitig_62.g23909 Utricularia gibba
unitig_90.g27439 Utricularia gibba
vmacro15116 Vaccinium macrocarpon
VMungo0720G0363 Vigna mungo
VMungo1383G1878 Vigna mungo
Zm00001eb014470 Zea mays
Zm00001eb095400 Zea mays
Zm00001eb111830 Zea mays
Zm00001eb331390 Zea mays
Zm00001eb396300 Zea mays
Zm00001eb420810 Zea mays

User provided reference genes

Program Settings