Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33250 Brassica napus
A03p42420 Brassica napus
A05p27020 Brassica napus
Aa31LG8G8340 Aethionema arabicum
Actinidia05119 Actinidia chinensis
Actinidia09707 Actinidia chinensis
Actinidia27214 Actinidia chinensis
AL3G35830 Arabidopsis lyrata
Aqoxy4G01970 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53UQ7J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C24T6R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJQ6C2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JLE0C4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M85TWM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQ6SJP Arachis hypogaea
AT3G21710 Arabidopsis thaliana
ATR0697G184 Amborella trichopoda
Atru.chr2.3239 Acer truncatum
Atru.chr6.3164 Acer truncatum
AUR62008775 Chenopodium quinoa
AUR62020528 Chenopodium quinoa
AUR62025052 Chenopodium quinoa
AUR62025464 Chenopodium quinoa
AUR62037135 Chenopodium quinoa
AUR62043226 Chenopodium quinoa
BcaB04g19182 Brassica carinata
BcaB04g20571 Brassica carinata
BcaB06g26277 Brassica carinata
BcaC01g03489 Brassica carinata
BcaC05g28139 Brassica carinata
BcaC09g49107 Brassica carinata
BolC1t04204H Brassica oleracea
BolC3t17475H Brassica oleracea
BolC5t32905H Brassica oleracea
BraA01t03443Z Brassica rapa
BraA03t13394Z Brassica rapa
BraA05t21588Z Brassica rapa
C01p42460 Brassica napus
C03p51900 Brassica napus
C05p41700 Brassica napus
CAN.G1151.1 Capsicum annuum
CANSAT64G1541 Cannabis sativa
CARHR097660 Cardamine hirsuta
Carub.0003s2176 Capsella rubella
Ca_26241_v3 Cicer arietinum L.
Cc05_g04910 Coffea canephora
Cc05_g13390 Coffea canephora
Cfa014424 Carpinus fangiana
Cfa020399 Carpinus fangiana
Ciclev10009727m.g Citrus clementina
Ciclev10018295m.g Citrus clementina
CiPaw.02G060800 Carya illinoinensis
CiPaw.02G061000 Carya illinoinensis
CiPaw.03G161600 Carya illinoinensis
CiPaw.04G116900 Carya illinoinensis
CiPaw.11G185600 Carya illinoinensis
CiPaw.11G185800 Carya illinoinensis
CiPaw.12G127500 Carya illinoinensis
ClCG02G001830 Citrullus lanatus
ClCG02G008550 Citrullus lanatus
ClCG05G014610 Citrullus lanatus
COL.COLO4_09606 Corchorus olitorius
COL.COLO4_27687 Corchorus olitorius
Cpa.g.c34122 Carica papaya
CsaV3_2G035090 Cucumis sativus L.
CsaV3_3G023230 Cucumis sativus L.
CsaV3_7G003710 Cucumis sativus L.
CSS0004659 Camellia sinensis var. sinensis
CSS0028377 Camellia sinensis var. sinensis
DCAR_010032 Daucus carota
DCAR_019769 Daucus carota
DCAR_021181 Daucus carota
Dinv02736 Davidia involucrata
Dinv22289 Davidia involucrata
Dinv39698 Davidia involucrata
Dinv40727 Davidia involucrata
Duzib213G0532 Durio zibethinus
Duzib251G0618 Durio zibethinus
Duzib268G1153 Durio zibethinus
ECA233G0087 Erigeron canadensis
ECA246G4222 Erigeron canadensis
EL10Ac9g20666 Beta vulgaris
Eucgr.A01716 Eucalyptus grandis
Eucgr.F00971 Eucalyptus grandis
Eucgr.F03440 Eucalyptus grandis
FAN02G4078 Fragaria x ananassa
FAN05G4571 Fragaria x ananassa
FAN09G0250 Fragaria x ananassa
FAN14G0905 Fragaria x ananassa
FAN21G2316 Fragaria x ananassa
FAN25G2313 Fragaria x ananassa
FvH4_3g22010 Fragaria vesca
FvH4_6g43420 Fragaria vesca
Glyma.06G271700 Glycine max
Glyma.06G303502 Glycine max
Glyma.12G100400 Glycine max
Glyma.12G133300 Glycine max
Glyma.12G194600 Glycine max
Glyma.12G212900 Glycine max
Glyma.13G288700 Glycine max
Glyma.13G308000 Glycine max
Gohir.A01G076300 Gossypium hirsutum
Gohir.A12G156600 Gossypium hirsutum
Gohir.A13G140400 Gossypium hirsutum
Gohir.D01G063800 Gossypium hirsutum
Gohir.D02G134300 Gossypium hirsutum
Gohir.D12G159433 Gossypium hirsutum
Gohir.D13G087600 Gossypium hirsutum
Gohir.D13G145200 Gossypium hirsutum
Gorai.002G084300 Gossypium raimondii
Gorai.005G150200 Gossypium raimondii
Gorai.008G172600 Gossypium raimondii
Gorai.013G100100 Gossypium raimondii
Gorai.013G163000 Gossypium raimondii
GSVIVG01001985001 Vitis vinifera
GSVIVG01030606001 Vitis vinifera
HanXRQChr05g0159181 Helianthus annuus
HanXRQChr15g0496381 Helianthus annuus
Haze_09635 Corylus avellana
Haze_12882 Corylus avellana
Hma1.2p1_0249F.1_g102340 Hydrangea macrophylla
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla
HPP92_004138 Vanilla planifolia
Hund01143 Selenicereus undatus
Lalb_Chr01g0005591 Lupinus albus
Lalb_Chr03g0028801 Lupinus albus
Lalb_Chr14g0367581 Lupinus albus
Lalb_Chr19g0134811 Lupinus albus
Lalb_Chr19g0135751 Lupinus albus
Lalb_Chr24g0393141 Lupinus albus
Lj1A758T10 Lonicera japonica
Lj1A867G31 Lonicera japonica
Lj3g0002811 Lotus japonicus
Lj3g0014799 Lotus japonicus
Lsat_1_v5_gn_5_5060 Lactuca sativa
Lsat_1_v5_gn_8_128540 Lactuca sativa
Manes.03G127850 Manihot esculenta
Manes.08G076650 Manihot esculenta
Manes.12G075700 Manihot esculenta
Manes.13G071601 Manihot esculenta
Manes.15G075000 Manihot esculenta
MBI02_g23957_MAGBIO Magnolia biondii
MBI18_g03004_MAGBIO Magnolia biondii
MD03G1209200 Malus domestica
MD09G1107000 Malus domestica
MD11G1224000 Malus domestica
MD17G1094800 Malus domestica
Medtr2g083300 Medicago truncatula
Medtr2g088590 Medicago truncatula
Medtr4g046870 Medicago truncatula
MELO3C018090.2 Cucumis melo
MELO3C018808.2 Cucumis melo
MELO3C019247.2 Cucumis melo
Migut.H01224 Erythranthe guttata
MSTRG.12286 Avicennia marina
MSTRG.14152 Avicennia marina
Nitab4.5_0000006g0090 Nicotiana tabacum
Nitab4.5_0000896g0010 Nicotiana tabacum
Nitab4.5_0001176g0060 Nicotiana tabacum
Nitab4.5_0001884g0020 Nicotiana tabacum
Nitab4.5_0002083g0020 Nicotiana tabacum
Nitab4.5_0002229g0220 Nicotiana tabacum
Nitab4.5_0002342g0040 Nicotiana tabacum
Nitab4.5_0003509g0040 Nicotiana tabacum
Nitab4.5_0015723g0010 Nicotiana tabacum
Nn1g03606 Nelumbo nucifera
Nn1g07065 Nelumbo nucifera
Oeu020128.1 Olea europaea
Oeu027251.1 Olea europaea
Oeu036754.1 Olea europaea
Oeu041933.1 Olea europaea
Os07g0524000 Oryza sativa ssp. japonica
Peaxi162Scf00007g01016 Petunia axillaris
Peaxi162Scf00407g00210 Petunia axillaris
Peaxi162Scf00462g00005 Petunia axillaris
Peaxi162Scf00932g00218 Petunia axillaris
PGR042G0859 Punica granatum
PGR083G2810 Punica granatum
PGSC0003DMG400005270 Solanum tuberosum
PGSC0003DMG400008737 Solanum tuberosum
PGSC0003DMG400014397 Solanum tuberosum
PGSC0003DMG400025494 Solanum tuberosum
Phvul.005G093000 Phaseolus vulgaris
Phvul.005G114400 Phaseolus vulgaris
Phvul.011G105200 Phaseolus vulgaris
Phvul.011G136900 Phaseolus vulgaris
Potri.001G419400 Populus trichocarpa
Potri.002G230300 Populus trichocarpa
Potri.011G135700 Populus trichocarpa
Potri.014G151900 Populus trichocarpa
Prupe.3G218700 Prunus persica
Prupe.4G205800 Prunus persica
Psat5g251520 Pisum sativum
Psat5g264560 Pisum sativum
Psat7g153320 Pisum sativum
PSO210G5289 Papaver somniferum
PSO541G2462 Papaver somniferum
PSO675G7460 Papaver somniferum
QL08p012603 Quercus lobata
QL08p033485 Quercus lobata
RcHm_v2.0_Chr2g0159761 Rosa chinensis
Rhsim06G0159700 Rhododendron simsii
RhsimUnG0010900 Rhododendron simsii
Sabra02G0175700 Salix brachista
Sabra11G0121900 Salix brachista
Sabra14G0115500 Salix brachista
Sabra16G0285000 Salix brachista
SalBow1G8286 Salvia bowleyana
Sc01g0004150 Simmondsia chinensis
Sc03g0008840 Simmondsia chinensis
Sc12g0002340 Simmondsia chinensis
Sed0000680 Sechium edule
Sed0016321 Sechium edule
Sed0021551 Sechium edule
Solyc07g052460.3 Solanum lycopersicum
Solyc10g006430.3 Solanum lycopersicum
Solyc12g005820.3 Solanum lycopersicum
Sopen05g027000 Solanum pennellii
Sopen07g026090 Solanum pennellii
Sopen10g002380 Solanum pennellii
Sopen12g001770 Solanum pennellii
Sp3g19720 Schrenkiella parvula
TAR624G1330 Trochodendron aralioides
TAR626G0168 Trochodendron aralioides
TAR627G0783 Trochodendron aralioides
THA.LOC104808493 Tarenaya hassleriana
Thecc.02G312900 Theobroma cacao
Thecc.07G046400 Theobroma cacao
Thhalv10021505m.g Eutrema salsugineum
TPR.G19979 Trifolium pratense
TPR.G4201 Trifolium pratense
TPR.G4595 Trifolium pratense
TWI36G0639 Tripterygium wilfordii
TWI38G1873 Tripterygium wilfordii
TWI38G2122 Tripterygium wilfordii
TWI39G1011 Tripterygium wilfordii
vmacro12218 Vaccinium macrocarpon
VMungo0971G0001 Vigna mungo
VMungo1080G0378 Vigna mungo
VMungo1080G0677 Vigna mungo
VMungo1127G2104 Vigna mungo
Zm00001eb322970 Zea mays

User provided reference genes

Program Settings