Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16930 Brassica napus
A02p11710 Brassica napus
A02p11720 Brassica napus
A03p56200 Brassica napus
Aa31LG3G8920 Aethionema arabicum
Actinidia08576 Actinidia chinensis
Actinidia31838 Actinidia chinensis
Actinidia34155 Actinidia chinensis
Ah.07g206590 Amaranthus hybridus
Ah.13g069150 Amaranthus hybridus
AL7G27390 Arabidopsis lyrata
AL7G27410 Arabidopsis lyrata
AL8G27020 Arabidopsis lyrata
Aqoxy7G00243 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea
AT4G25670 Arabidopsis thaliana
AT4G25690 Arabidopsis thaliana
AT5G52550 Arabidopsis thaliana
ATR0661G020 Amborella trichopoda
Atru.chr1.379 Acer truncatum
Atru.ctg97_1.16 Acer truncatum
Atru.ctg97_1.17 Acer truncatum
AUR62021127 Chenopodium quinoa
AUR62031417 Chenopodium quinoa
BcaB03g12482 Brassica carinata
BcaB03g14963 Brassica carinata
BcaB05g21966 Brassica carinata
BcaC03g14518 Brassica carinata
BcaC06g32789 Brassica carinata
BcaNung07307 Brassica carinata
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus
BolC1t02046H Brassica oleracea
BolC1t02047H Brassica oleracea
BolC1t02049H Brassica oleracea
BolC1t02050H Brassica oleracea
BolC2t08091H Brassica oleracea
BolC7t45935H Brassica oleracea
BraA01t01645Z Brassica rapa
BraA01t01646Z Brassica rapa
BraA01t01648Z Brassica rapa
BraA01t01649Z Brassica rapa
BraA02t06236Z Brassica rapa
BraA02t06237Z Brassica rapa
BraA03t14690Z Brassica rapa
BraA04t18134Z Brassica rapa
C01p21210 Brassica napus
C02p19530 Brassica napus
C02p19540 Brassica napus
CAN.G126.12 Capsicum annuum
CAN.G126.13 Capsicum annuum
CAN.G204.16 Capsicum annuum
CAN.G204.17 Capsicum annuum
CANSAT11G0421 Cannabis sativa
CARHR233110 Cardamine hirsuta
CARHR233120 Cardamine hirsuta
CARHR233140 Cardamine hirsuta
CARHR233150 Cardamine hirsuta
CARHR265540 Cardamine hirsuta
Carub.0007s1526 Capsella rubella
Carub.0007s1527 Capsella rubella
Carub.0007s1529 Capsella rubella
Carub.0007s1530 Capsella rubella
Carub.0008s1268 Capsella rubella
Carub.0008s1269 Capsella rubella
Ca_10728_v3 Cicer arietinum L.
Cc02_g02410 Coffea canephora
Cc02_g02420 Coffea canephora
Cfa016283 Carpinus fangiana
Ciclev10005857m.g Citrus clementina
CiPaw.06G003100 Carya illinoinensis
CiPaw.06G003200 Carya illinoinensis
CiPaw.06G003300 Carya illinoinensis
CiPaw.06G003400 Carya illinoinensis
CiPaw.12G018300 Carya illinoinensis
CiPaw.12G018400 Carya illinoinensis
ClCG05G008340 Citrullus lanatus
ClCG05G008350 Citrullus lanatus
COL.COLO4_10060 Corchorus olitorius
Cpa.g.sc107.104 Carica papaya
CsaV3_3G017430 Cucumis sativus L.
CSS0001563 Camellia sinensis var. sinensis
CSS0004722 Camellia sinensis var. sinensis
CSS0012099 Camellia sinensis var. sinensis
CSS0020125 Camellia sinensis var. sinensis
CSS0021117 Camellia sinensis var. sinensis
CSS0026204 Camellia sinensis var. sinensis
CSS0034926 Camellia sinensis var. sinensis
CSS0038907 Camellia sinensis var. sinensis
DCAR_009393 Daucus carota
DCAR_020268 Daucus carota
Dinv28390 Davidia involucrata
Dinv35249 Davidia involucrata
Duzib068G1050 Durio zibethinus
Duzib084G1013 Durio zibethinus
Duzib205G1365 Durio zibethinus
ECA232G1618 Erigeron canadensis
ECA238G2131 Erigeron canadensis
EL10Ac3g05428 Beta vulgaris
Eucgr.A02748 Eucalyptus grandis
FAN01G0089 Fragaria x ananassa
FAN03G0192 Fragaria x ananassa
FAN03G0359 Fragaria x ananassa
FAN03G0781 Fragaria x ananassa
FAN06G3328 Fragaria x ananassa
FAN10G0429 Fragaria x ananassa
FAN10G3196 Fragaria x ananassa
FvH4_7g30190 Fragaria vesca
Glyma.09G132500 Glycine max
Glyma.09G132600 Glycine max
Glyma.10G231251 Glycine max
Glyma.10G231300 Glycine max
Glyma.16G179250 Glycine max
Glyma.16G179300 Glycine max
Glyma.20G162500 Glycine max
Glyma.20G162551 Glycine max
Gohir.A08G098200 Gossypium hirsutum
Gohir.A09G182600 Gossypium hirsutum
Gohir.A11G011900 Gossypium hirsutum
Gohir.A11G012000 Gossypium hirsutum
Gohir.A12G255400 Gossypium hirsutum
Gohir.A12G255500 Gossypium hirsutum
Gohir.D08G109800 Gossypium hirsutum
Gohir.D09G177200 Gossypium hirsutum
Gohir.D09G177300 Gossypium hirsutum
Gohir.D11G011100 Gossypium hirsutum
Gohir.D11G011200 Gossypium hirsutum
Gohir.D12G256800 Gossypium hirsutum
Gohir.D12G256900 Gossypium hirsutum
Gorai.004G117400 Gossypium raimondii
Gorai.006G199200 Gossypium raimondii
Gorai.006G199300 Gossypium raimondii
Gorai.007G012600 Gossypium raimondii
Gorai.008G275000 Gossypium raimondii
Gorai.008G275100 Gossypium raimondii
GSVIVG01028866001 Vitis vinifera
HanXRQChr14g0462531 Helianthus annuus
Haze_00039 Corylus avellana
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla
HPP92_008924 Vanilla planifolia
HPP92_022210 Vanilla planifolia
HPP92_022228 Vanilla planifolia
HPP92_022231 Vanilla planifolia
Lalb_Chr02g0141231 Lupinus albus
Lalb_Chr02g0141241 Lupinus albus
Lalb_Chr03g0034811 Lupinus albus
Lalb_Chr03g0034821 Lupinus albus
Lalb_Chr06g0161301 Lupinus albus
Lalb_Chr06g0161311 Lupinus albus
Lalb_Chr21g0305221 Lupinus albus
Lalb_Chr21g0305231 Lupinus albus
Lj1P1004T73 Lonicera japonica
Lj5g0008853 Lotus japonicus
Lj8C18T8 Lonicera japonica
Lsat_1_v5_gn_2_131301 Lactuca sativa
Lsat_1_v5_gn_9_56481 Lactuca sativa
Manes.06G152100 Manihot esculenta
Manes.06G152150 Manihot esculenta
Manes.14G022900 Manihot esculenta
Manes.14G023000 Manihot esculenta
MBI11_g04751_MAGBIO Magnolia biondii
MD01G1207900 Malus domestica
MD01G1208000 Malus domestica
MD07G1278500 Malus domestica
MD07G1278600 Malus domestica
Medtr1g100090 Medicago truncatula
MELO3C006940.2 Cucumis melo
Migut.F00296 Erythranthe guttata
Migut.F01087 Erythranthe guttata
MSTRG.27090 Avicennia marina
MSTRG.74 Avicennia marina
MSTRG.8713 Avicennia marina
Nitab4.5_0000084g0400 Nicotiana tabacum
Nitab4.5_0000084g0420 Nicotiana tabacum
Nitab4.5_0000248g0010 Nicotiana tabacum
Nitab4.5_0000572g0140 Nicotiana tabacum
Nitab4.5_0003825g0080 Nicotiana tabacum
Nitab4.5_0003825g0100 Nicotiana tabacum
Nn1g01625 Nelumbo nucifera
Nn1g01626 Nelumbo nucifera
Nn1g08525 Nelumbo nucifera
Oeu036905.1 Olea europaea
Oeu045362.1 Olea europaea
Oeu060465.1 Olea europaea
Os02g0104200 Oryza sativa ssp. japonica
Os06g0106900 Oryza sativa ssp. japonica
Peaxi162Scf00444g00016 Petunia axillaris
Peaxi162Scf00444g00118 Petunia axillaris
Peaxi162Scf00618g00726 Petunia axillaris
PGR042G3073 Punica granatum
PGSC0003DMG400010167 Solanum tuberosum
PGSC0003DMG400028898 Solanum tuberosum
Phvul.004G109000 Phaseolus vulgaris
Potri.004G079900 Populus trichocarpa
Potri.004G080000 Populus trichocarpa
Potri.017G143215 Populus trichocarpa
Potri.017G143300 Populus trichocarpa
Prupe.2G300400 Prunus persica
Prupe.2G300500 Prunus persica
Prupe.7G027400 Prunus persica
Psat6g196360 Pisum sativum
PSO478G4817 Papaver somniferum
PSO782G2858 Papaver somniferum
QL09p012962 Quercus lobata
RcHm_v2.0_Chr1g0378241 Rosa chinensis
Rhsim03G0190700 Rhododendron simsii
Rhsim09G0200400 Rhododendron simsii
Sabra04G0053100 Salix brachista
Sabra06G0007800 Salix brachista
Sabra17G0120100 Salix brachista
SalBow4G1512 Salvia bowleyana
Sc19g0001290 Simmondsia chinensis
Sed0001656 Sechium edule
Sed0011382 Sechium edule
SEGI_15574 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05296 Striga asiatica
SGA_v2.0_scaffold113G31691 Striga asiatica
SGA_v2.0_scaffold60G21104 Striga asiatica
Solyc03g007990.2 Solanum lycopersicum
Solyc06g036250.2 Solanum lycopersicum
Sopen03g003930 Solanum pennellii
Sopen06g012030 Solanum pennellii
Sp7g23710 Schrenkiella parvula
Sp7g23730 Schrenkiella parvula
TAR374G0609 Trochodendron aralioides
TAR375G0840 Trochodendron aralioides
THA.LOC104800271 Tarenaya hassleriana
THA.LOC104811959 Tarenaya hassleriana
Thecc.03G183700 Theobroma cacao
Thecc.03G183800 Theobroma cacao
Thhalv10026278m.g Eutrema salsugineum
Thhalv10027473m.g Eutrema salsugineum
TPR.G21560 Trifolium pratense
TPR.G7753 Trifolium pratense
TWI14G0525 Tripterygium wilfordii
TWI23G0387 Tripterygium wilfordii
TWI39G0102 Tripterygium wilfordii
unitig_0.g2470 Utricularia gibba
unitig_37.g11969 Utricularia gibba
vmacro06629 Vaccinium macrocarpon
vmacro09817 Vaccinium macrocarpon
VMungo0251G0932 Vigna mungo
VMungo0464G0591 Vigna mungo
VMungo0720G1018 Vigna mungo
Zm00001eb229390 Zea mays

User provided reference genes

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