Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25210 Brassica napus
A03p25220 Brassica napus
A05p00840 Brassica napus
A05p25940 Brassica napus
A06p06900 Brassica napus
A08p34080 Brassica napus
A09p65140 Brassica napus
Aa31LG1G4670 Aethionema arabicum
Actinidia01627 Actinidia chinensis
Ah.11g046920 Amaranthus hybridus
AL1G21000 Arabidopsis lyrata
AL1G60310 Arabidopsis lyrata
AL3G34220 Arabidopsis lyrata
AL3G34230 Arabidopsis lyrata
AL4G43690 Arabidopsis lyrata
AL4G44540 Arabidopsis lyrata
AL4G44550 Arabidopsis lyrata
AL5G29530 Arabidopsis lyrata
AL5G29610 Arabidopsis lyrata
AL5G42780 Arabidopsis lyrata
AL5G42790 Arabidopsis lyrata
AL5G43650 Arabidopsis lyrata
AL5G43680 Arabidopsis lyrata
AL5G43690 Arabidopsis lyrata
AL5G43820 Arabidopsis lyrata
AL5G43830 Arabidopsis lyrata
AL5G44690 Arabidopsis lyrata
AL5G44780 Arabidopsis lyrata
AL5G44790 Arabidopsis lyrata
AL73U10010 Arabidopsis lyrata
AL7G38410 Arabidopsis lyrata
Aqoxy3G01338 Aquilegia oxysepala
Aqoxy6G00055 Aquilegia oxysepala
Aqoxy6G01599 Aquilegia oxysepala
Aqoxy7G00279 Aquilegia oxysepala
Aqoxy7G01216 Aquilegia oxysepala
AT1G10270 Arabidopsis thaliana
AT3G60960 Arabidopsis thaliana
AT3G60980 Arabidopsis thaliana
AT5G28340 Arabidopsis thaliana
AT5G28380 Arabidopsis thaliana
ATR1089G152 Amborella trichopoda
Atru.chr13.1188 Acer truncatum
Atru.chr6.351 Acer truncatum
Atru.chr6.402 Acer truncatum
AUR62000337 Chenopodium quinoa
BcaB01g03268 Brassica carinata
BcaB02g07363 Brassica carinata
BcaB02g09551 Brassica carinata
BcaB08g37339 Brassica carinata
BcaC01g05123 Brassica carinata
BcaC01g05124 Brassica carinata
BcaC01g05125 Brassica carinata
BcaC01g05126 Brassica carinata
BcaC01g05127 Brassica carinata
BcaC01g05129 Brassica carinata
BcaC01g05136 Brassica carinata
BcaC01g05137 Brassica carinata
BcaC01g05138 Brassica carinata
BcaC02g09004 Brassica carinata
BcaC02g12597 Brassica carinata
BcaC02g12609 Brassica carinata
BcaC02g12622 Brassica carinata
BcaC02g12824 Brassica carinata
BcaC04g21472 Brassica carinata
BcaC04g21473 Brassica carinata
BcaC05g24908 Brassica carinata
BcaC06g33523 Brassica carinata
BcaC06g33535 Brassica carinata
BcaC07g38540 Brassica carinata
BcaC07g41827 Brassica carinata
BcaC08g45154 Brassica carinata
BcaC08g45156 Brassica carinata
BcaC09g48563 Brassica carinata
BcaNung04658 Brassica carinata
BcaNung04659 Brassica carinata
BolC1t04813H Brassica oleracea
BolC3t15357H Brassica oleracea
BolC3t15358H Brassica oleracea
BolC4t21716H Brassica oleracea
BolC4t21737H Brassica oleracea
BolC4t21754H Brassica oleracea
BolC4t25520H Brassica oleracea
BolC5t29589H Brassica oleracea
BolC6t37944H Brassica oleracea
BolC7t45363H Brassica oleracea
BolC8t48989H Brassica oleracea
BolC8t51240H Brassica oleracea
BolC9t55996H Brassica oleracea
BolC9t55997H Brassica oleracea
BraA01t03859Z Brassica rapa
BraA03t11721Z Brassica rapa
BraA03t11722Z Brassica rapa
BraA05t19087Z Brassica rapa
BraA06t23906Z Brassica rapa
BraA08t35321Z Brassica rapa
BraA09t41857Z Brassica rapa
C01p48210 Brassica napus
C01p48580 Brassica napus
C03p30080 Brassica napus
C03p30090 Brassica napus
C04p01010 Brassica napus
C04p39550 Brassica napus
C05p08380 Brassica napus
C06p27760 Brassica napus
C07p48550 Brassica napus
C08p13530 Brassica napus
C08p36570 Brassica napus
C08p49080 Brassica napus
C09p31380 Brassica napus
C09p31390 Brassica napus
CAN.G855.39 Capsicum annuum
CANSAT80G1108 Cannabis sativa
CARHR010370 Cardamine hirsuta
CARHR140100 Cardamine hirsuta
CARHR170480 Cardamine hirsuta
CARHR170890 Cardamine hirsuta
CARHR170900 Cardamine hirsuta
CARHR263970 Cardamine hirsuta
CARHR265210 Cardamine hirsuta
Carub.0001s0966 Capsella rubella
Carub.0004s2572 Capsella rubella
Carub.0004s2841 Capsella rubella
Carub.0004s2842 Capsella rubella
Carub.0005s2723 Capsella rubella
Carub.0005s2724 Capsella rubella
Carub.0005s2841 Capsella rubella
Carub.0005s2842 Capsella rubella
Carub.0006s2574 Capsella rubella
Carub.0006s2575 Capsella rubella
Carub.0007s2495 Capsella rubella
Carub.0201s0001 Capsella rubella
Carub.0201s0002 Capsella rubella
Ca_17359_v3 Cicer arietinum L.
Cc02_g23470 Coffea canephora
CDE05G3421 Ceratophyllum demersum
Cfa004457 Carpinus fangiana
Ciclev10000271m.g Citrus clementina
CiPaw.05G002300 Carya illinoinensis
ClCG10G007350 Citrullus lanatus
COL.COLO4_19503 Corchorus olitorius
Cpa.g.sc113.4 Carica papaya
CsaV3_2G036260 Cucumis sativus L.
CSS0030972 Camellia sinensis var. sinensis
DCAR_003286 Daucus carota
DCAR_022278 Daucus carota
Dinv29621 Davidia involucrata
Dinv29670 Davidia involucrata
Duzib128G0132 Durio zibethinus
ECA236G2567 Erigeron canadensis
ECA236G4782 Erigeron canadensis
EL10Ac6g14013 Beta vulgaris
Eucgr.I02789 Eucalyptus grandis
FAN04G1220 Fragaria x ananassa
FAN08G2274 Fragaria x ananassa
FAN18G3010 Fragaria x ananassa
FvH4_5g27880 Fragaria vesca
Glyma.12G164700 Glycine max
Glyma.16G001000 Glycine max
Gohir.A05G405100 Gossypium hirsutum
Gohir.D04G010450 Gossypium hirsutum
Gohir.D04G010500 Gossypium hirsutum
Gorai.012G012400 Gossypium raimondii
GSVIVG01023159001 Vitis vinifera
HanXRQChr06g0180791 Helianthus annuus
HanXRQChr08g0228491 Helianthus annuus
Haze_10006 Corylus avellana
Hma1.2p1_0052F.1_g029920 Hydrangea macrophylla
Hma1.2p1_0062F.1_g034310 Hydrangea macrophylla
Hma1.2p1_0604F.1_g187753 Hydrangea macrophylla
HPP92_001276 Vanilla planifolia
HPP92_003447 Vanilla planifolia
Hund15406 Selenicereus undatus
Lalb_Chr18g0061131 Lupinus albus
Lj4g0012938 Lotus japonicus
Lj6g0026509 Lotus japonicus
Lj9A281T41 Lonicera japonica
Lsat_1_v5_gn_5_91740 Lactuca sativa
Lsat_1_v5_gn_7_77221 Lactuca sativa
Manes.07G028200 Manihot esculenta
MBI16_g21730_MAGBIO Magnolia biondii
MD08G1246600 Malus domestica
MD15G1441500 Malus domestica
Medtr2g005340 Medicago truncatula
Medtr7g069230 Medicago truncatula
Medtr7g069270 Medicago truncatula
Medtr7g069290 Medicago truncatula
Medtr7g069300 Medicago truncatula
Medtr7g069310 Medicago truncatula
Medtr8g102650 Medicago truncatula
MELO3C021840.2 Cucumis melo
Migut.N00859 Erythranthe guttata
Migut.N00860 Erythranthe guttata
MSTRG.5190 Avicennia marina
Nitab4.5_0001057g0030 Nicotiana tabacum
Nitab4.5_0001129g0060 Nicotiana tabacum
Nn8g41098 Nelumbo nucifera
Oeu000151.1 Olea europaea
Oeu002155.1 Olea europaea
Oeu044734.1 Olea europaea
Os05g0365500 Oryza sativa ssp. japonica
Peaxi162Scf00011g01628 Petunia axillaris
PGR142G0082 Punica granatum
PGSC0003DMG400024905 Solanum tuberosum
Phvul.006G221100 Phaseolus vulgaris
Potri.003G002950 Populus trichocarpa
Potri.004G227800 Populus trichocarpa
Prupe.1G583600 Prunus persica
Psat7g131880 Pisum sativum
PSO339G5268 Papaver somniferum
PSO384G0639 Papaver somniferum
QL02p102471 Quercus lobata
QL02p103093 Quercus lobata
QL07p020316 Quercus lobata
RcHm_v2.0_Chr3g0472581 Rosa chinensis
RcHm_v2.0_Chr7g0220071 Rosa chinensis
Rhsim05G0116200 Rhododendron simsii
Rhsim05G0174700 Rhododendron simsii
Sabra01G0172800 Salix brachista
Sc06g0000730 Simmondsia chinensis
Sc19g0003420 Simmondsia chinensis
Sed0018539 Sechium edule
SEGI_21063 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29546 Striga asiatica
Solyc01g103160.3 Solanum lycopersicum
Sopen01g045570 Solanum pennellii
Sp1g08860 Schrenkiella parvula
TAR376G0418 Trochodendron aralioides
TAR628G0533 Trochodendron aralioides
THA.LOC104823675 Tarenaya hassleriana
THA.LOC104823676 Tarenaya hassleriana
Thecc.10G188300 Theobroma cacao
Thhalv10006738m.g Eutrema salsugineum
Thhalv10023497m.g Eutrema salsugineum
Thhalv10023949m.g Eutrema salsugineum
TPR.G17149 Trifolium pratense
TPR.G23485 Trifolium pratense
TPR.G26202 Trifolium pratense
TPR.G40676 Trifolium pratense
TWI63G1692 Tripterygium wilfordii
unitig_699.g19842 Utricularia gibba
unitig_699.g19843 Utricularia gibba
unitig_699.g19844 Utricularia gibba
VMungo0540G0272 Vigna mungo
Zm00001eb047560 Zea mays

User provided reference genes

Program Settings