Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p22180 Brassica napus
Actinidia08734 Actinidia chinensis
Actinidia18697 Actinidia chinensis
Actinidia28266 Actinidia chinensis
Actinidia34297 Actinidia chinensis
Ah.07g205490 Amaranthus hybridus
Ah.07g205500 Amaranthus hybridus
Ah.13g071250 Amaranthus hybridus
Ah.13g071280 Amaranthus hybridus
AL6G28260 Arabidopsis lyrata
Aqoxy3G02055 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7S2350 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C27XEM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QIP5TL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QNZF80 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5MZ8J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VUM9KL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZD4NBX Arachis hypogaea
AT5G17210 Arabidopsis thaliana
ATR0829G057 Amborella trichopoda
Atru.chr12.2014 Acer truncatum
AUR62000882 Chenopodium quinoa
AUR62000883 Chenopodium quinoa
AUR62000884 Chenopodium quinoa
AUR62005090 Chenopodium quinoa
AUR62005091 Chenopodium quinoa
AUR62005094 Chenopodium quinoa
AUR62005916 Chenopodium quinoa
AUR62006075 Chenopodium quinoa
AUR62006077 Chenopodium quinoa
AUR62019417 Chenopodium quinoa
AUR62019418 Chenopodium quinoa
AUR62019419 Chenopodium quinoa
AUR62028148 Chenopodium quinoa
AUR62032044 Chenopodium quinoa
AUR62035550 Chenopodium quinoa
BcaB08g36798 Brassica carinata
BcaC03g18539 Brassica carinata
BcaC04g18822 Brassica carinata
BcaNung00413 Brassica carinata
BcaNung00417 Brassica carinata
BcaNung00420 Brassica carinata
BcaNung00421 Brassica carinata
BolC9t58833H Brassica oleracea
BraA10t44277Z Brassica rapa
C09p59970 Brassica napus
CAN.G303.71 Capsicum annuum
CANSAT21G1003 Cannabis sativa
CARHR196000 Cardamine hirsuta
Carub.0006s1540 Capsella rubella
Ca_04933_v3 Cicer arietinum L.
Cc02_g00430 Coffea canephora
CDE01G0571 Ceratophyllum demersum
CDE02G0938 Ceratophyllum demersum
Cfa015897 Carpinus fangiana
Ciclev10013225m.g Citrus clementina
CiPaw.05G236700 Carya illinoinensis
CiPaw.06G020000 Carya illinoinensis
CiPaw.06G020100 Carya illinoinensis
ClCG01G005010 Citrullus lanatus
ClCG07G017290 Citrullus lanatus
COL.COLO4_06390 Corchorus olitorius
Cpa.g.sc39.54 Carica papaya
CsaV3_4G004490 Cucumis sativus L.
CsaV3_5G005270 Cucumis sativus L.
CSS0022427 Camellia sinensis var. sinensis
CSS0046349 Camellia sinensis var. sinensis
DCAR_002473 Daucus carota
DCAR_004229 Daucus carota
DCAR_010549 Daucus carota
DCAR_014571 Daucus carota
DCAR_020399 Daucus carota
Dinv17268 Davidia involucrata
Dinv29175 Davidia involucrata
Duzib106G1872 Durio zibethinus
Duzib128G0634 Durio zibethinus
Duzib177G0623 Durio zibethinus
ECA233G1225 Erigeron canadensis
ECA233G3407 Erigeron canadensis
ECA240G0598 Erigeron canadensis
ECA240G0959 Erigeron canadensis
EL10Ac3g05101 Beta vulgaris
EL10Ac3g05261 Beta vulgaris
EL10Ac3g05264 Beta vulgaris
EL10Ac4g09322 Beta vulgaris
Eucgr.A02959 Eucalyptus grandis
Eucgr.G01794 Eucalyptus grandis
Eucgr.K00096 Eucalyptus grandis
Eucgr.K00098 Eucalyptus grandis
Eucgr.L02108 Eucalyptus grandis
FAN03G3363 Fragaria x ananassa
FvH4_7g33561 Fragaria vesca
Glyma.11G092900 Glycine max
Glyma.12G019200 Glycine max
Gohir.A02G139200 Gossypium hirsutum
Gohir.A08G223350 Gossypium hirsutum
Gohir.A08G223400 Gossypium hirsutum
Gohir.A08G223432 Gossypium hirsutum
Gohir.A08G223464 Gossypium hirsutum
Gohir.A08G223480 Gossypium hirsutum
Gohir.D03G049900 Gossypium hirsutum
Gohir.D08G243601 Gossypium hirsutum
Gohir.D08G243701 Gossypium hirsutum
Gohir.D08G243801 Gossypium hirsutum
Gohir.D08G243901 Gossypium hirsutum
Gohir.D08G244001 Gossypium hirsutum
Gorai.003G051400 Gossypium raimondii
Gorai.004G259500 Gossypium raimondii
Gorai.004G259600 Gossypium raimondii
Gorai.004G259700 Gossypium raimondii
Gorai.004G259800 Gossypium raimondii
Gorai.004G259900 Gossypium raimondii
Gorai.004G260000 Gossypium raimondii
GSVIVG01024453001 Vitis vinifera
HanXRQChr02g0047711 Helianthus annuus
HanXRQChr03g0086951 Helianthus annuus
HanXRQChr03g0087531 Helianthus annuus
HanXRQChr07g0186991 Helianthus annuus
HanXRQChr07g0206601 Helianthus annuus
HanXRQChr10g0304371 Helianthus annuus
HanXRQChr10g0304381 Helianthus annuus
HanXRQChr10g0304401 Helianthus annuus
HanXRQChr15g0491051 Helianthus annuus
HanXRQChr15g0491061 Helianthus annuus
Haze_00589 Corylus avellana
Hma1.2p1_0758F.1_g213570 Hydrangea macrophylla
HPP92_022723 Vanilla planifolia
Hund09768 Selenicereus undatus
Hund21088 Selenicereus undatus
Hund26176 Selenicereus undatus
Hund26177 Selenicereus undatus
Lalb_Chr19g0139871 Lupinus albus
Lj1A1032G30 Lonicera japonica
Lj3A890T57 Lonicera japonica
Lj3g0016389 Lotus japonicus
Lsat_1_v5_gn_0_46680 Lactuca sativa
Lsat_1_v5_gn_6_10480 Lactuca sativa
Lsat_1_v5_gn_6_10520 Lactuca sativa
Lsat_1_v5_gn_6_10560 Lactuca sativa
Lsat_1_v5_gn_6_88500 Lactuca sativa
Lsat_1_v5_gn_6_89321 Lactuca sativa
Lsat_1_v5_gn_6_89361 Lactuca sativa
Manes.08G164700 Manihot esculenta
Mapoly0007s0269 Marchantia polymorpha
MBI04_g21136_MAGBIO Magnolia biondii
MD01G1233300 Malus domestica
MD01G1233400 Malus domestica
MD07G1305500 Malus domestica
Medtr4g077250 Medicago truncatula
MELO3C005433.2 Cucumis melo
MELO3C017618.2 Cucumis melo
Migut.F00954 Erythranthe guttata
Nitab4.5_0000021g0320 Nicotiana tabacum
Nitab4.5_0005081g0090 Nicotiana tabacum
Nn1g02013 Nelumbo nucifera
Nn3g19275 Nelumbo nucifera
Os05g0433400 Oryza sativa ssp. japonica
Os05g0433800 Oryza sativa ssp. japonica
Os05g0434600 Oryza sativa ssp. japonica
Os05g0434800 Oryza sativa ssp. japonica
Os05g0435100 Oryza sativa ssp. japonica
Os05g0435300 Oryza sativa ssp. japonica
Os06g0114700 Oryza sativa ssp. japonica
Peaxi162Scf00133g00916 Petunia axillaris
Peaxi162Scf01650g00038 Petunia axillaris
PGR031G0062 Punica granatum
PGR042G3857 Punica granatum
PGSC0003DMG400000568 Solanum tuberosum
Phvul.011G021600 Phaseolus vulgaris
Potri.019G048300 Populus trichocarpa
Pp3c24_9440 Physcomitrium patens
Pp3c3_2300 Physcomitrium patens
Prupe.2G323600 Prunus persica
Psat7g171160 Pisum sativum
PSO063G1513 Papaver somniferum
PSO063G1725 Papaver somniferum
PSO478G1873 Papaver somniferum
PSO478G3060 Papaver somniferum
PSO478G3227 Papaver somniferum
PSO478G4335 Papaver somniferum
PSO478G4953 Papaver somniferum
PSO478G5071 Papaver somniferum
PSO782G3995 Papaver somniferum
PSO782G4484 Papaver somniferum
PSO782G4969 Papaver somniferum
QL09p025880 Quercus lobata
QL09p025907 Quercus lobata
QL09p025922 Quercus lobata
QL09p025978 Quercus lobata
QL09p025989 Quercus lobata
RcHm_v2.0_Chr1g0383821 Rosa chinensis
Rhsim03G0220000 Rhododendron simsii
Rhsim03G0220100 Rhododendron simsii
Rhsim03G0220200 Rhododendron simsii
Rhsim03G0220300 Rhododendron simsii
Rhsim03G0220400 Rhododendron simsii
Rhsim09G0212000 Rhododendron simsii
Sabra13G0071600 Salix brachista
Sabra19G0057500 Salix brachista
SalBow2G3364 Salvia bowleyana
SalBow4G1237 Salvia bowleyana
Sc13g0010780 Simmondsia chinensis
Sc19g0000260 Simmondsia chinensis
Sc19g0001530 Simmondsia chinensis
Sc19g0001540 Simmondsia chinensis
Sed0007308 Sechium edule
Sed0019983 Sechium edule
Sed0024454 Sechium edule
SEGI_02210 Sequoiadendron giganteum
SEGI_02441 Sequoiadendron giganteum
SEGI_02785 Sequoiadendron giganteum
SEGI_10725 Sequoiadendron giganteum
SEGI_15207 Sequoiadendron giganteum
SEGI_17153 Sequoiadendron giganteum
SEGI_18520 Sequoiadendron giganteum
SEGI_27585 Sequoiadendron giganteum
SEGI_35621 Sequoiadendron giganteum
SEGI_36138 Sequoiadendron giganteum
SEGI_38688 Sequoiadendron giganteum
SEGI_40370 Sequoiadendron giganteum
SGA_v2.0_scaffold50G18432 Striga asiatica
SMO201G0204 Selaginella moellendorffii
Solyc03g096860.3 Solanum lycopersicum
Sopen03g027610 Solanum pennellii
Sp6g27020 Schrenkiella parvula
TAR374G1715 Trochodendron aralioides
TAR629G2358 Trochodendron aralioides
THA.LOC104820872 Tarenaya hassleriana
Thecc.05G207400 Theobroma cacao
Thhalv10014664m.g Eutrema salsugineum
TPR.G29504 Trifolium pratense
TWI34G1962 Tripterygium wilfordii
unitig_578.g16665 Utricularia gibba
vmacro06491 Vaccinium macrocarpon
vmacro06492 Vaccinium macrocarpon
vmacro06493 Vaccinium macrocarpon
vmacro06494 Vaccinium macrocarpon
vmacro06495 Vaccinium macrocarpon
vmacro06496 Vaccinium macrocarpon
vmacro06497 Vaccinium macrocarpon
vmacro10181 Vaccinium macrocarpon
VMungo1127G1411 Vigna mungo
Zm00001eb026060 Zea mays
Zm00001eb289190 Zea mays
Zm00001eb348630 Zea mays
Zm00001eb378900 Zea mays

User provided reference genes

Program Settings