Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11920 Brassica napus
A09p38610 Brassica napus
Aa31LG7G9860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2454 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2857 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2355 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1563 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1789 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2438 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3439 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4412 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5300 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1481 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1622 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1782 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1789 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2450 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2669 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2688 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.358 Anthoceros agrestis
Actinidia09645 Actinidia chinensis
Actinidia20715 Actinidia chinensis
Actinidia30638 Actinidia chinensis
Ah.03g136080 Amaranthus hybridus
AL1G40740 Arabidopsis lyrata
Aqoxy5G02276 Aquilegia oxysepala
Aqoxy5G03341 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8GYA0C Arachis hypogaea
AT1G27340 Arabidopsis thaliana
ATR0559G214 Amborella trichopoda
ATR0561G142 Amborella trichopoda
ATR0584G262 Amborella trichopoda
Atru.chr11.2338 Acer truncatum
AUR62005631 Chenopodium quinoa
AUR62028917 Chenopodium quinoa
BcaB03g12074 Brassica carinata
BcaC05g26549 Brassica carinata
BcaC05g26739 Brassica carinata
BcaC05g26740 Brassica carinata
BcaC08g44294 Brassica carinata
BolC5t31323H Brassica oleracea
BolC7t42293H Brassica oleracea
BraA07t28977Z Brassica rapa
BraA09t39366Z Brassica rapa
C05p26040 Brassica napus
C07p17870 Brassica napus
CAN.G70.10 Capsicum annuum
CANSAT01G2827 Cannabis sativa
CARHR026910 Cardamine hirsuta
CARHR026920 Cardamine hirsuta
Carub.0001s2587 Capsella rubella
Ca_16451_v3 Cicer arietinum L.
Cc11_g17010 Coffea canephora
Ciclev10031436m.g Citrus clementina
CiPaw.05G108500 Carya illinoinensis
CiPaw.06G103600 Carya illinoinensis
ClCG06G001130 Citrullus lanatus
COL.COLO4_20416 Corchorus olitorius
Cpa.g.sc43.69 Carica papaya
CsaV3_6G007070 Cucumis sativus L.
CSS0001428 Camellia sinensis var. sinensis
CSS0014036 Camellia sinensis var. sinensis
CSS0036768 Camellia sinensis var. sinensis
DCAR_026456 Daucus carota
Dinv10947 Davidia involucrata
Dinv17569 Davidia involucrata
Duzib248G0261 Durio zibethinus
Duzib251G0128 Durio zibethinus
Duzib268G1054 Durio zibethinus
ECA233G5207 Erigeron canadensis
ECA246G0607 Erigeron canadensis
EL10Ac6g13516 Beta vulgaris
Eucgr.H04635 Eucalyptus grandis
FAN07G0920 Fragaria x ananassa
FAN12G0247 Fragaria x ananassa
FAN17G0774 Fragaria x ananassa
FvH4_4g23620 Fragaria vesca
Glyma.05G147900 Glycine max
Glyma.08G104800 Glycine max
Glyma.11G251600 Glycine max
Glyma.18G005400 Glycine max
Gohir.A01G154500 Gossypium hirsutum
Gohir.A03G125400 Gossypium hirsutum
Gohir.D01G146700 Gossypium hirsutum
Gohir.D02G148200 Gossypium hirsutum
Gorai.002G182600 Gossypium raimondii
Gorai.005G165900 Gossypium raimondii
GSVIVG01010498001 Vitis vinifera
HanXRQChr05g0128691 Helianthus annuus
HanXRQChr08g0207911 Helianthus annuus
HanXRQChr12g0361241 Helianthus annuus
Haze_12431 Corylus avellana
HPP92_007010 Vanilla planifolia
Hund06095 Selenicereus undatus
Hund25470 Selenicereus undatus
Lalb_Chr07g0187081 Lupinus albus
Lalb_Chr23g0278141 Lupinus albus
Lj3P1070T8 Lonicera japonica
Lj4g0005095 Lotus japonicus
Lsat_1_v5_gn_3_30801 Lactuca sativa
Lsat_1_v5_gn_8_147861 Lactuca sativa
Manes.12G010000 Manihot esculenta
Manes.13G010700 Manihot esculenta
Mapoly0001s0182 Marchantia polymorpha
Mapoly0002s0187 Marchantia polymorpha
Mapoly0003s0155 Marchantia polymorpha
Mapoly0004s0242 Marchantia polymorpha
Mapoly0005s0140 Marchantia polymorpha
Mapoly0006s0115 Marchantia polymorpha
Mapoly0006s0116 Marchantia polymorpha
Mapoly0008s0053 Marchantia polymorpha
Mapoly0014s0188 Marchantia polymorpha
Mapoly0019s0019 Marchantia polymorpha
Mapoly0025s0090 Marchantia polymorpha
Mapoly0026s0133 Marchantia polymorpha
Mapoly0027s0129 Marchantia polymorpha
Mapoly0045s0085 Marchantia polymorpha
Mapoly0048s0061 Marchantia polymorpha
Mapoly0063s0077 Marchantia polymorpha
Mapoly0063s0081 Marchantia polymorpha
Mapoly0081s0012 Marchantia polymorpha
Mapoly0081s0013 Marchantia polymorpha
Mapoly0083s0066 Marchantia polymorpha
Mapoly0083s0085 Marchantia polymorpha
Mapoly0101s0058 Marchantia polymorpha
Mapoly0110s0044 Marchantia polymorpha
Mapoly0114s0043 Marchantia polymorpha
Mapoly0114s0044 Marchantia polymorpha
Mapoly0125s0029 Marchantia polymorpha
Mapoly0138s0031 Marchantia polymorpha
Mapoly0170s0023 Marchantia polymorpha
MapolyY_A0023 Marchantia polymorpha
MBI07_g18750_MAGBIO Magnolia biondii
MD13G1120600 Malus domestica
Medtr1g033280 Medicago truncatula
Medtr1g033310 Medicago truncatula
Medtr3g085160 Medicago truncatula
MELO3C022422.2 Cucumis melo
Migut.K00952 Erythranthe guttata
MSTRG.498 Avicennia marina
MSTRG.8011 Avicennia marina
Nitab4.5_0002317g0020 Nicotiana tabacum
Nitab4.5_0004914g0010 Nicotiana tabacum
Nn3g16449 Nelumbo nucifera
Nn4g22302 Nelumbo nucifera
Nn5g28167 Nelumbo nucifera
Nn8g38694 Nelumbo nucifera
Oeu004454.1 Olea europaea
Oeu006522.1 Olea europaea
Oeu035470.1 Olea europaea
Oeu049142.1 Olea europaea
Oeu056664.3 Olea europaea
Os01g0923900 Oryza sativa ssp. japonica
Peaxi162Scf00128g00136 Petunia axillaris
Peaxi162Scf00518g00033 Petunia axillaris
PGR119G2572 Punica granatum
PGSC0003DMG400034305 Solanum tuberosum
Phvul.001G262700 Phaseolus vulgaris
Phvul.L002546 Phaseolus vulgaris
Potri.001G057100 Populus trichocarpa
Potri.003G171300 Populus trichocarpa
Pp3c11_15444 Physcomitrium patens
Pp3c11_5570 Physcomitrium patens
Pp3c11_5571 Physcomitrium patens
Pp3c14_15830 Physcomitrium patens
Pp3c14_19228 Physcomitrium patens
Pp3c14_23730 Physcomitrium patens
Pp3c14_9030 Physcomitrium patens
Pp3c15_11120 Physcomitrium patens
Pp3c15_17390 Physcomitrium patens
Pp3c16_10660 Physcomitrium patens
Pp3c16_24050 Physcomitrium patens
Pp3c19_17170 Physcomitrium patens
Pp3c1_27000 Physcomitrium patens
Pp3c1_41170 Physcomitrium patens
Pp3c1_8490 Physcomitrium patens
Pp3c22_14550 Physcomitrium patens
Pp3c24_18510 Physcomitrium patens
Pp3c24_8170 Physcomitrium patens
Pp3c25_11890 Physcomitrium patens
Pp3c25_9030 Physcomitrium patens
Pp3c26_380 Physcomitrium patens
Pp3c26_4850 Physcomitrium patens
Pp3c2_350 Physcomitrium patens
Pp3c3_27650 Physcomitrium patens
Pp3c3_32280 Physcomitrium patens
Pp3c3_5460 Physcomitrium patens
Pp3c4_21230 Physcomitrium patens
Pp3c5_26310 Physcomitrium patens
Pp3c7_1090 Physcomitrium patens
Pp3c7_9930 Physcomitrium patens
Pp3c9_20960 Physcomitrium patens
Pp3c9_6080 Physcomitrium patens
Prupe.1G224600 Prunus persica
Psat5g096960 Pisum sativum
PSO017G6955 Papaver somniferum
PSO478G1885 Papaver somniferum
QL03p052448 Quercus lobata
RcHm_v2.0_Chr4g0430081 Rosa chinensis
Rhsim02G0109800 Rhododendron simsii
Rhsim12G0092200 Rhododendron simsii
Sabra01G0041300 Salix brachista
Sabra03G0125400 Salix brachista
SalBow2G0967 Salvia bowleyana
Sc11g0000420 Simmondsia chinensis
Sc14g0009090 Simmondsia chinensis
Sed0014031 Sechium edule
Sed0016657 Sechium edule
SEGI_03954 Sequoiadendron giganteum
SEGI_05332 Sequoiadendron giganteum
SEGI_08151 Sequoiadendron giganteum
SEGI_08933 Sequoiadendron giganteum
SEGI_17583 Sequoiadendron giganteum
SEGI_38976 Sequoiadendron giganteum
SEGI_41126 Sequoiadendron giganteum
SGA_v2.0_scaffold46G17476 Striga asiatica
SMO116G0047 Selaginella moellendorffii
SMO116G0409 Selaginella moellendorffii
SMO347G0268 Selaginella moellendorffii
SMO361G0323 Selaginella moellendorffii
SMO367G0569 Selaginella moellendorffii
SMO367G1056 Selaginella moellendorffii
Solyc05g015520.3 Solanum lycopersicum
Sopen12g034970 Solanum pennellii
Sp1g23570 Schrenkiella parvula
TAR371G1123 Trochodendron aralioides
TAR624G1292 Trochodendron aralioides
TAR629G1933 Trochodendron aralioides
THA.LOC104807128 Tarenaya hassleriana
THA.LOC104807136 Tarenaya hassleriana
THA.LOC104825498 Tarenaya hassleriana
Thecc.02G206300 Theobroma cacao
Thhalv10007553m.g Eutrema salsugineum
TPR.G17783 Trifolium pratense
TPR.G34562 Trifolium pratense
TWI36G1321 Tripterygium wilfordii
TWI75G0386 Tripterygium wilfordii
unitig_22.g6404 Utricularia gibba
unitig_699.g19960 Utricularia gibba
unitig_747.g21123 Utricularia gibba
unitig_8.g3134 Utricularia gibba
vmacro16104 Vaccinium macrocarpon
VMungo0251G0428 Vigna mungo
VMungo1383G2061 Vigna mungo
Zm00001eb143020 Zea mays
Zm00001eb364210 Zea mays

User provided reference genes

Program Settings