Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16960 Brassica napus
A03p56210 Brassica napus
A10p10160 Brassica napus
Aa31LG3G8930 Aethionema arabicum
Aa31sc457G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1975 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.960 Anthoceros agrestis
Actinidia08578 Actinidia chinensis
Actinidia34158 Actinidia chinensis
Ah.07g206570 Amaranthus hybridus
AL7G27380 Arabidopsis lyrata
AL8G27050 Arabidopsis lyrata
Aqoxy7G00238 Aquilegia oxysepala
Aqoxy7G00239 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.71H07L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QUE4GP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4S514 Arachis hypogaea
AT4G25700 Arabidopsis thaliana
AT5G52570 Arabidopsis thaliana
ATR0661G510 Amborella trichopoda
ATR0733G233 Amborella trichopoda
Atru.chr1.359 Acer truncatum
Atru.chr9.2135 Acer truncatum
AUR62021124 Chenopodium quinoa
AUR62031420 Chenopodium quinoa
BcaB05g21968 Brassica carinata
BcaB08g35616 Brassica carinata
BcaC03g14517 Brassica carinata
BcaC04g20559 Brassica carinata
BcaC06g32788 Brassica carinata
BNapus_Darmor_BZH_scaffold_232p00040 Brassica napus
BolC1t02051H Brassica oleracea
BolC2t08089H Brassica oleracea
BolC7t45936H Brassica oleracea
BolC9t57093H Brassica oleracea
BraA01t01651Z Brassica rapa
BraA03t14691Z Brassica rapa
BraA10t43096Z Brassica rapa
C01p21240 Brassica napus
C07p54500 Brassica napus
C09p42130 Brassica napus
CAN.G126.43 Capsicum annuum
CAN.G204.19 Capsicum annuum
CANSAT21G2310 Cannabis sativa
CARHR233160 Cardamine hirsuta
CARHR265570 Cardamine hirsuta
Carub.0007s1525 Capsella rubella
Carub.0008s1271 Capsella rubella
Ca_10724_v3 Cicer arietinum L.
Ca_20711_v3 Cicer arietinum L.
Ca_22330_v3 Cicer arietinum L.
Ca_23801_v3 Cicer arietinum L.
CBR_g41300 Chara braunii
Cc02_g02380 Coffea canephora
CDE02G4537 Ceratophyllum demersum
CDE11G0768 Ceratophyllum demersum
CDE11G1108 Ceratophyllum demersum
Cfa012190 Carpinus fangiana
Cfa016286 Carpinus fangiana
Ciclev10005481m.g Citrus clementina
Ciclev10022121m.g Citrus clementina
CiPaw.05G262800 Carya illinoinensis
CiPaw.06G003500 Carya illinoinensis
CiPaw.11G131200 Carya illinoinensis
CiPaw.12G018600 Carya illinoinensis
ClCG01G002410 Citrullus lanatus
ClCG05G008380 Citrullus lanatus
COL.COLO4_08377 Corchorus olitorius
COL.COLO4_10056 Corchorus olitorius
Cpa.g.sc107.106 Carica papaya
Cre04.g215050 Chlamydomonas reinhardtii
CsaV3_3G017450 Cucumis sativus L.
CsaV3_5G002520 Cucumis sativus L.
CSS0044082 Camellia sinensis var. sinensis
DCAR_009395 Daucus carota
DCAR_014519 Daucus carota
DCAR_020269 Daucus carota
Dinv28388 Davidia involucrata
Dinv35252 Davidia involucrata
Dinv38910 Davidia involucrata
Duzib068G0221 Durio zibethinus
Duzib068G1134 Durio zibethinus
Duzib084G0918 Durio zibethinus
Duzib205G0922 Durio zibethinus
ECA232G2017 Erigeron canadensis
EL10Ac3g05423 Beta vulgaris
Eucgr.D01823 Eucalyptus grandis
Eucgr.K00294 Eucalyptus grandis
FAN03G2663 Fragaria x ananassa
FAN03G3019 Fragaria x ananassa
FAN04G2210 Fragaria x ananassa
FAN06G0668 Fragaria x ananassa
FAN06G4486 Fragaria x ananassa
FAN08G0505 Fragaria x ananassa
FAN10G0890 Fragaria x ananassa
FAN10G3798 Fragaria x ananassa
FAN13G3065 Fragaria x ananassa
FAN18G2332 Fragaria x ananassa
FvH4_5g03020 Fragaria vesca
FvH4_7g30220 Fragaria vesca
Glyma.09G132200 Glycine max
Glyma.10G231200 Glycine max
Glyma.16G179100 Glycine max
Glyma.20G162600 Glycine max
Gohir.A09G182700 Gossypium hirsutum
Gohir.A12G234100 Gossypium hirsutum
Gohir.A12G254300 Gossypium hirsutum
Gohir.D09G177400 Gossypium hirsutum
Gohir.D12G233200 Gossypium hirsutum
Gohir.D12G256600 Gossypium hirsutum
Gorai.006G199400 Gossypium raimondii
Gorai.008G249600 Gossypium raimondii
Gorai.008G274800 Gossypium raimondii
GSVIVG01019403001 Vitis vinifera
GSVIVG01028864001 Vitis vinifera
HanXRQChr15g0494071 Helianthus annuus
Haze_00042 Corylus avellana
Haze_00043 Corylus avellana
Haze_08828 Corylus avellana
Hma1.2p1_0274F.1_g110150 Hydrangea macrophylla
HPP92_003465 Vanilla planifolia
HPP92_022234 Vanilla planifolia
Hund04784 Selenicereus undatus
Lalb_Chr03g0034851 Lupinus albus
Lalb_Chr06g0161321 Lupinus albus
Lalb_Chr19g0130661 Lupinus albus
Lj1A1004T81 Lonicera japonica
Lj2g0019079 Lotus japonicus
Lj5g0005474 Lotus japonicus
Lsat_1_v5_gn_9_56521 Lactuca sativa
Manes.02G018300 Manihot esculenta
Manes.06G152200 Manihot esculenta
Manes.14G022700 Manihot esculenta
Mapoly0015s0152 Marchantia polymorpha
MBI04_g18152_MAGBIO Magnolia biondii
MBI04_g41503_MAGBIO Magnolia biondii
MBI07_g26349_MAGBIO Magnolia biondii
MBI11_g24495_MAGBIO Magnolia biondii
MCO15G484 Micromonas commoda
MD01G1208300 Malus domestica
MD06G1089200 Malus domestica
MD07G1278900 Malus domestica
Medtr1g100070 Medicago truncatula
Medtr6g048440 Medicago truncatula
MELO3C005704.2 Cucumis melo
MELO3C006938.2 Cucumis melo
Migut.F00293 Erythranthe guttata
Migut.F01086 Erythranthe guttata
MSTRG.27088 Avicennia marina
MSTRG.8476 Avicennia marina
Nitab4.5_0000084g0490 Nicotiana tabacum
Nitab4.5_0002269g0030 Nicotiana tabacum
Nitab4.5_0003140g0010 Nicotiana tabacum
Nitab4.5_0004854g0020 Nicotiana tabacum
Nitab4.5_0010460g0020 Nicotiana tabacum
Nitab4.5_0020188g0020 Nicotiana tabacum
Nn1g01633 Nelumbo nucifera
Oeu036902.1 Olea europaea
Oeu060467.1 Olea europaea
Oeu060468.1 Olea europaea
Os03g0125100 Oryza sativa ssp. japonica
Os04g0578400 Oryza sativa ssp. japonica
Os10g0533500 Oryza sativa ssp. japonica
Peaxi162Scf00444g00126 Petunia axillaris
Peaxi162Scf00618g00079 Petunia axillaris
PGR142G2206 Punica granatum
PGSC0003DMG400009501 Solanum tuberosum
PGSC0003DMG400010169 Solanum tuberosum
PGSC0003DMG400028897 Solanum tuberosum
Phvul.004G108900 Phaseolus vulgaris
Phvul.007G074200 Phaseolus vulgaris
Potri.001G100200 Populus trichocarpa
Potri.004G074000 Populus trichocarpa
Potri.017G145700 Populus trichocarpa
Pp3c18_8820 Physcomitrium patens
Pp3c19_16780 Physcomitrium patens
Pp3c21_16590 Physcomitrium patens
PRCOL_00003937 Prasinoderma coloniale
Prupe.2G300800 Prunus persica
Prupe.5G105100 Prunus persica
Prupe.5G133900 Prunus persica
Prupe.5G201800 Prunus persica
Prupe.6G049800 Prunus persica
Prupe.7G160800 Prunus persica
Psat0ss1860g0160 Pisum sativum
Psat6g196280 Pisum sativum
PSO478G4289 Papaver somniferum
PSO782G4593 Papaver somniferum
QL09p012910 Quercus lobata
QL12p032032 Quercus lobata
QL12p032045 Quercus lobata
QL93p0222_0008 Quercus lobata
RcHm_v2.0_Chr1g0378281 Rosa chinensis
RcHm_v2.0_Chr7g0196841 Rosa chinensis
Rhsim03G0191100 Rhododendron simsii
Rhsim09G0200600 Rhododendron simsii
Sabra03G0093900 Salix brachista
Sabra04G0048800 Salix brachista
Sabra17G0121800 Salix brachista
Sc13g0009170 Simmondsia chinensis
Sc19g0001230 Simmondsia chinensis
Sed0001830 Sechium edule
Sed0020922 Sechium edule
Sed0026940 Sechium edule
SEGI_01229 Sequoiadendron giganteum
SEGI_08448 Sequoiadendron giganteum
SEGI_13526 Sequoiadendron giganteum
SEGI_15696 Sequoiadendron giganteum
SEGI_16434 Sequoiadendron giganteum
SEGI_18427 Sequoiadendron giganteum
SEGI_21012 Sequoiadendron giganteum
SEGI_35990 Sequoiadendron giganteum
SEGI_40743 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05293 Striga asiatica
SGA_v2.0_scaffold60G21106 Striga asiatica
SMO266G0009 Selaginella moellendorffii
SMO270G0060 Selaginella moellendorffii
SMO297G0013 Selaginella moellendorffii
SMO334G0061 Selaginella moellendorffii
Solyc03g007960.3 Solanum lycopersicum
Solyc06g036260.3 Solanum lycopersicum
Sopen03g003900 Solanum pennellii
Sopen06g012040 Solanum pennellii
Sp6g14770 Schrenkiella parvula
Sp7g23740 Schrenkiella parvula
TAR374G0285 Trochodendron aralioides
TAR375G0737 Trochodendron aralioides
THA.LOC104800269 Tarenaya hassleriana
THA.LOC104811957 Tarenaya hassleriana
Thecc.03G184100 Theobroma cacao
Thecc.03G284900 Theobroma cacao
Thhalv10014816m.g Eutrema salsugineum
Thhalv10025794m.g Eutrema salsugineum
TPR.G33542 Trifolium pratense
TPR.G40771 Trifolium pratense
TPR.G40849 Trifolium pratense
TPR.G7766 Trifolium pratense
TWI14G0998 Tripterygium wilfordii
TWI39G0086 Tripterygium wilfordii
unitig_37.g12538 Utricularia gibba
vmacro06628 Vaccinium macrocarpon
vmacro09815 Vaccinium macrocarpon
VMungo0720G0823 Vigna mungo
Zm00001eb073250 Zea mays
Zm00001eb207240 Zea mays
Zm00001eb286830 Zea mays
Zm00001eb403700 Zea mays
Zm00001eb428470 Zea mays

User provided reference genes

Program Settings