Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03980 Brassica napus
A02p03990 Brassica napus
A03p13490 Brassica napus
A04p23660 Brassica napus
A06p22060 Brassica napus
Aa31LG1G13250 Aethionema arabicum
Aa31LG4G13810 Aethionema arabicum
Actinidia37069 Actinidia chinensis
Ah.08g223190 Amaranthus hybridus
Ah.08g223200 Amaranthus hybridus
Ah.08g223210 Amaranthus hybridus
AL5G22430 Arabidopsis lyrata
AL5G22450 Arabidopsis lyrata
AL5G22460 Arabidopsis lyrata
AL6G33310 Arabidopsis lyrata
Aqoxy2G01042 Aquilegia oxysepala
Aqoxy4G02708 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FY23RQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JG5ZXS Arachis hypogaea
AT3G44300 Arabidopsis thaliana
AT3G44310 Arabidopsis thaliana
AT3G44320 Arabidopsis thaliana
AT5G22300 Arabidopsis thaliana
ATR0081G064 Amborella trichopoda
ATR0579G014 Amborella trichopoda
ATR0772G120 Amborella trichopoda
ATR0772G147 Amborella trichopoda
ATR0772G149 Amborella trichopoda
Atru.chr3.3159 Acer truncatum
AUR62001530 Chenopodium quinoa
AUR62020252 Chenopodium quinoa
BcaB01g01174 Brassica carinata
BcaB01g04397 Brassica carinata
BcaB01g04398 Brassica carinata
BcaB05g22734 Brassica carinata
BcaB06g28397 Brassica carinata
BcaB06g28466 Brassica carinata
BcaB06g28467 Brassica carinata
BcaC01g02029 Brassica carinata
BcaC01g06421 Brassica carinata
BcaC03g13874 Brassica carinata
BcaC03g18535 Brassica carinata
BcaC07g40459 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00740 Brassica napus
BolC2t06793H Brassica oleracea
BolC2t07149H Brassica oleracea
BolC3t14010H Brassica oleracea
BolC3t19195H Brassica oleracea
BolC4t27514H Brassica oleracea
BraA02t05362Z Brassica rapa
BraA02t05651Z Brassica rapa
BraA03t10656Z Brassica rapa
BraA04t17891Z Brassica rapa
BraA06t25296Z Brassica rapa
C02p08790 Brassica napus
C02p10810 Brassica napus
C03p15790 Brassica napus
C03p69350 Brassica napus
C04p60110 Brassica napus
CAN.G745.22 Capsicum annuum
CAN.G745.28 Capsicum annuum
CANSAT25G2714 Cannabis sativa
CANSAT64G1713 Cannabis sativa
CARHR059830 Cardamine hirsuta
CARHR104570 Cardamine hirsuta
CARHR164570 Cardamine hirsuta
CARHR191250 Cardamine hirsuta
Carub.0005s1002 Capsella rubella
Carub.0005s1003 Capsella rubella
Carub.0006s2004 Capsella rubella
Carub.0007s2680 Capsella rubella
Ca_19445_v3 Cicer arietinum L.
CBR_g36715 Chara braunii
Cc01_g08760 Coffea canephora
CDE04G3244 Ceratophyllum demersum
CDE07G0890 Ceratophyllum demersum
Cfa009980 Carpinus fangiana
Cfa016654 Carpinus fangiana
Cfa021703 Carpinus fangiana
Cfa022699 Carpinus fangiana
Ciclev10020864m.g Citrus clementina
Ciclev10028755m.g Citrus clementina
CiPaw.10G013400 Carya illinoinensis
CiPaw.13G132500 Carya illinoinensis
CiPaw.13G132600 Carya illinoinensis
ClCG01G011750 Citrullus lanatus
COL.COLO4_29655 Corchorus olitorius
Cpa.g.sc104.84 Carica papaya
Cpa.g.sc195.34 Carica papaya
CsaV3_1G015110 Cucumis sativus L.
CSS0003071 Camellia sinensis var. sinensis
CSS0025669 Camellia sinensis var. sinensis
CSS0027967 Camellia sinensis var. sinensis
CSS0031098 Camellia sinensis var. sinensis
Dinv22806 Davidia involucrata
Dinv22808 Davidia involucrata
Duzib093G0355 Durio zibethinus
Duzib150G0663 Durio zibethinus
Duzib168G1289 Durio zibethinus
Duzib170G0571 Durio zibethinus
ECA240G0368 Erigeron canadensis
EL10Ac7g16327 Beta vulgaris
Eucgr.B01705 Eucalyptus grandis
Eucgr.J00529 Eucalyptus grandis
Eucgr.J00530 Eucalyptus grandis
Eucgr.J01565 Eucalyptus grandis
Eucgr.L02100 Eucalyptus grandis
FAN11G3565 Fragaria x ananassa
FAN16G3412 Fragaria x ananassa
FAN21G3754 Fragaria x ananassa
FAN25G2876 Fragaria x ananassa
FvH4_3g25810 Fragaria vesca
Glyma.11G180900 Glycine max
Glyma.12G092300 Glycine max
Gohir.A04G060600 Gossypium hirsutum
Gohir.A07G111450 Gossypium hirsutum
Gohir.D04G096000 Gossypium hirsutum
Gohir.D07G115200 Gossypium hirsutum
Gorai.001G123400 Gossypium raimondii
Gorai.009G398700 Gossypium raimondii
GSVIVG01011519001 Vitis vinifera
GSVIVG01022690001 Vitis vinifera
GSVIVG01022699001 Vitis vinifera
GSVIVG01022702001 Vitis vinifera
GSVIVG01022705001 Vitis vinifera
GSVIVG01022712001 Vitis vinifera
GSVIVG01022714001 Vitis vinifera
GSVIVG01022715001 Vitis vinifera
GSVIVG01022719001 Vitis vinifera
GSVIVG01022720001 Vitis vinifera
GSVIVG01022721001 Vitis vinifera
GSVIVG01022723001 Vitis vinifera
GSVIVG01036073001 Vitis vinifera
GSVIVG01036074001 Vitis vinifera
GSVIVG01036075001 Vitis vinifera
HanXRQChr03g0091481 Helianthus annuus
HanXRQChr12g0364281 Helianthus annuus
HanXRQChr13g0420411 Helianthus annuus
Haze_19664 Corylus avellana
Haze_23339 Corylus avellana
HPP92_012650 Vanilla planifolia
Hund18781 Selenicereus undatus
Hund18782 Selenicereus undatus
Lalb_Chr03g0028301 Lupinus albus
Lj2A971G34 Lonicera japonica
Lj2A971G35 Lonicera japonica
Lj3g0013127 Lotus japonicus
Lj3g0016839 Lotus japonicus
Lj3g0020064 Lotus japonicus
Lsat_1_v5_gn_3_117240 Lactuca sativa
Manes.04G000700 Manihot esculenta
Manes.09G051000 Manihot esculenta
Manes.11G164700 Manihot esculenta
Mapoly0038s0103 Marchantia polymorpha
Mapoly0069s0046 Marchantia polymorpha
Mapoly0150s0021 Marchantia polymorpha
MBI17_g11951_MAGBIO Magnolia biondii
MBI17_g34508_MAGBIO Magnolia biondii
MD03G1150700 Malus domestica
MD11G1170100 Malus domestica
Medtr2064s0010 Medicago truncatula
Medtr4g052380 Medicago truncatula
Medtr4g052390 Medicago truncatula
MELO3C025585.2 Cucumis melo
Migut.D02426 Erythranthe guttata
MSTRG.21025 Avicennia marina
Nitab4.5_0001135g0040 Nicotiana tabacum
Nitab4.5_0001135g0050 Nicotiana tabacum
Nitab4.5_0003516g0030 Nicotiana tabacum
Nitab4.5_0003516g0040 Nicotiana tabacum
Nitab4.5_0004370g0060 Nicotiana tabacum
Nn2g14241 Nelumbo nucifera
Nn2g15500 Nelumbo nucifera
Nn6g34793 Nelumbo nucifera
Nn7g36100 Nelumbo nucifera
Oeu031467.1 Olea europaea
Os02g0635000 Oryza sativa ssp. japonica
Os02g0635200 Oryza sativa ssp. japonica
Peaxi162Scf00224g00516 Petunia axillaris
PGR119G0094 Punica granatum
PGR119G2521 Punica granatum
PGSC0003DMG400026329 Solanum tuberosum
Phvul.011G096700 Phaseolus vulgaris
Potri.004G199600 Populus trichocarpa
Potri.006G207700 Populus trichocarpa
Potri.009G161001 Populus trichocarpa
Potri.016G074200 Populus trichocarpa
Pp3c21_15520 Physcomitrium patens
Prupe.6G137600 Prunus persica
Prupe.7G100200 Prunus persica
Psat7g186680 Pisum sativum
PSO339G2264 Papaver somniferum
PSO339G2912 Papaver somniferum
PSO384G1444 Papaver somniferum
PSO384G4067 Papaver somniferum
QL01p011757 Quercus lobata
QL01p011767 Quercus lobata
QL01p011774 Quercus lobata
QL07p037999 Quercus lobata
QL10p058044 Quercus lobata
QL10p058095 Quercus lobata
QL93p1999_0039 Quercus lobata
RcHm_v2.0_Chr5g0047031 Rosa chinensis
Rhsim01G0202900 Rhododendron simsii
Sabra04G0134800 Salix brachista
Sabra06G0159800 Salix brachista
Sabra16G0076800 Salix brachista
Sabra16G0079900 Salix brachista
SalBow3G2689 Salvia bowleyana
SalBow3G4101 Salvia bowleyana
SalBow6G4975 Salvia bowleyana
Sc06g0007130 Simmondsia chinensis
Sc06g0007140 Simmondsia chinensis
Sc12g0004700 Simmondsia chinensis
Sc12g0004710 Simmondsia chinensis
Sed0027695 Sechium edule
SEGI_37198 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07102 Striga asiatica
SGA_v2.0_scaffold1783G54038 Striga asiatica
SGA_v2.0_scaffold7G03993 Striga asiatica
SMO114G0037 Selaginella moellendorffii
Solyc11g068730.2 Solanum lycopersicum
Sopen11g027440 Solanum pennellii
Sp2g02540 Schrenkiella parvula
Sp5g16960 Schrenkiella parvula
Sp5g16970 Schrenkiella parvula
Sp6g22940 Schrenkiella parvula
TAR633G2089 Trochodendron aralioides
TAR633G2179 Trochodendron aralioides
TAR633G2341 Trochodendron aralioides
THA.LOC104810929 Tarenaya hassleriana
Thecc.05G099000 Theobroma cacao
Thecc.09G277600 Theobroma cacao
Thhalv10010499m.g Eutrema salsugineum
Thhalv10010504m.g Eutrema salsugineum
Thhalv10013949m.g Eutrema salsugineum
Thhalv10023557m.g Eutrema salsugineum
TPR.G17206 Trifolium pratense
TWI75G0194 Tripterygium wilfordii
TWI77G0963 Tripterygium wilfordii
TWI79G0289 Tripterygium wilfordii
unitig_0.g1471 Utricularia gibba
vmacro14335 Vaccinium macrocarpon
vmacro14336 Vaccinium macrocarpon
vmacro14337 Vaccinium macrocarpon
VMungo1127G1590 Vigna mungo
Zm00001eb185550 Zea mays
Zm00001eb248290 Zea mays

User provided reference genes

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