Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01690 Brassica napus
A09p68560 Brassica napus
Aa31LG6G14140 Aethionema arabicum
Aa31LG9G13170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.141 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.160 Anthoceros agrestis
Actinidia12014 Actinidia chinensis
Actinidia12015 Actinidia chinensis
Actinidia22662 Actinidia chinensis
Actinidia22663 Actinidia chinensis
Actinidia25198 Actinidia chinensis
Actinidia33352 Actinidia chinensis
Actinidia36459 Actinidia chinensis
Ah.02g125730 Amaranthus hybridus
Ah.03g146050 Amaranthus hybridus
AL1G12120 Arabidopsis lyrata
AL7G13564 Arabidopsis lyrata
Aqoxy5G01141 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3R5SIR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LZ7NGX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PHSA4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VAI4HB Arachis hypogaea
AT1G02740 Arabidopsis thaliana
AT4G37280 Arabidopsis thaliana
ATR0736G213 Amborella trichopoda
Atru.chr13.766 Acer truncatum
Atru.chr13.768 Acer truncatum
Atru.chr3.245 Acer truncatum
AUR62003942 Chenopodium quinoa
AUR62038257 Chenopodium quinoa
BcaC07g42305 Brassica carinata
BcaC07g42403 Brassica carinata
BcaC07g42404 Brassica carinata
BcaNung02534 Brassica carinata
BolC1t00178H Brassica oleracea
BolC3t20200H Brassica oleracea
BolC8t52832H Brassica oleracea
BraA01t00160Z Brassica rapa
BraA09t42199Z Brassica rapa
C01p01850 Brassica napus
C01p01860 Brassica napus
C03p79480 Brassica napus
C03p79490 Brassica napus
C08p53170 Brassica napus
CAN.G1621.7 Capsicum annuum
CAN.G370.8 Capsicum annuum
CANSAT25G1175 Cannabis sativa
CANSAT25G3002 Cannabis sativa
CARHR002040 Cardamine hirsuta
CARHR245670 Cardamine hirsuta
Carub.0001s0184 Capsella rubella
Carub.0007s0301 Capsella rubella
Ca_01078_v3 Cicer arietinum L.
Ca_15927_v3 Cicer arietinum L.
Ca_28705_v3 Cicer arietinum L.
CBR_g29291 Chara braunii
Cc07_g06470 Coffea canephora
Cc10_g05170 Coffea canephora
Cc10_g05180 Coffea canephora
CDE04G1693 Ceratophyllum demersum
CDE04G3118 Ceratophyllum demersum
CDE06G0383 Ceratophyllum demersum
Cfa018044 Carpinus fangiana
Cfa025312 Carpinus fangiana
Ciclev10001792m.g Citrus clementina
Ciclev10026104m.g Citrus clementina
CiPaw.02G005900 Carya illinoinensis
CiPaw.15G050600 Carya illinoinensis
ClCG01G017100 Citrullus lanatus
ClCG05G020270 Citrullus lanatus
COL.COLO4_07366 Corchorus olitorius
COL.COLO4_11487 Corchorus olitorius
Cpa.g.sc21.141 Carica papaya
Cpa.g.sc6.94 Carica papaya
Cre16.g692400 Chlamydomonas reinhardtii
CsaV3_4G034740 Cucumis sativus L.
CsaV3_6G043580 Cucumis sativus L.
CSS0024021 Camellia sinensis var. sinensis
CSS0038061 Camellia sinensis var. sinensis
DCAR_010851 Daucus carota
Dinv26870 Davidia involucrata
Dinv30036 Davidia involucrata
Dinv39260 Davidia involucrata
Duzib093G2105 Durio zibethinus
Duzib147G0609 Durio zibethinus
Duzib187G1145 Durio zibethinus
ECA232G1505 Erigeron canadensis
ECA238G0306 Erigeron canadensis
EL10Ac6g15687 Beta vulgaris
EL10As7g23791 Beta vulgaris
Eucgr.F00003 Eucalyptus grandis
Eucgr.I00786 Eucalyptus grandis
FAN15G1867 Fragaria x ananassa
FAN19G1412 Fragaria x ananassa
FAN19G2167 Fragaria x ananassa
FAN20G2575 Fragaria x ananassa
FAN23G0486 Fragaria x ananassa
FAN23G1420 Fragaria x ananassa
FAN26G1262 Fragaria x ananassa
FAN26G2597 Fragaria x ananassa
FAN27G2631 Fragaria x ananassa
FAN28G0140 Fragaria x ananassa
FAN28G0483 Fragaria x ananassa
FAN28G2079 Fragaria x ananassa
FAN28G2798 Fragaria x ananassa
FvH4_1g16800 Fragaria vesca
FvH4_2g33880 Fragaria vesca
Glyma.04G042700 Glycine max
Glyma.05G099000 Glycine max
Glyma.06G043300 Glycine max
Glyma.17G166700 Glycine max
Gohir.A11G047700 Gossypium hirsutum
Gohir.D11G051300 Gossypium hirsutum
Gorai.007G055700 Gossypium raimondii
GSVIVG01000215001 Vitis vinifera
GSVIVG01009409001 Vitis vinifera
HanXRQChr02g0038051 Helianthus annuus
HanXRQChr14g0449701 Helianthus annuus
HanXRQChr16g0529941 Helianthus annuus
Haze_15347 Corylus avellana
Haze_18081 Corylus avellana
Hma1.2p1_0239F.1_g100000 Hydrangea macrophylla
Hma1.2p1_0239F.1_g100010 Hydrangea macrophylla
Hund05325 Selenicereus undatus
Hund05326 Selenicereus undatus
Hund13915 Selenicereus undatus
Lalb_Chr05g0226181 Lupinus albus
Lalb_Chr09g0333901 Lupinus albus
Lalb_Chr09g0333911 Lupinus albus
Lalb_Chr09g0333921 Lupinus albus
Lalb_Chr23g0267341 Lupinus albus
Lalb_Chr25g0279131 Lupinus albus
Lj1g0026557 Lotus japonicus
Lj4A764T9 Lonicera japonica
Lj4C156T11 Lonicera japonica
Lj4g0006274 Lotus japonicus
Lj4g0020654 Lotus japonicus
Lj4g0027466 Lotus japonicus
Lj7A78G57 Lonicera japonica
Lsat_1_v5_gn_1_23200 Lactuca sativa
Lsat_1_v5_gn_2_85480 Lactuca sativa
Lsat_1_v5_gn_4_164040 Lactuca sativa
Manes.05G178100 Manihot esculenta
Manes.13G117900 Manihot esculenta
Mapoly0072s0079 Marchantia polymorpha
MCO10G062 Micromonas commoda
MD02G1179200 Malus domestica
MD08G1091800 Malus domestica
MD12G1169000 Malus domestica
MD15G1076200 Malus domestica
MD15G1289100 Malus domestica
MD15G1289300 Malus domestica
Medtr3g102460 Medicago truncatula
Medtr4g094988 Medicago truncatula
MELO3C007587.2 Cucumis melo
MELO3C016790.2 Cucumis melo
Migut.L00184 Erythranthe guttata
Migut.N02722 Erythranthe guttata
MSTRG.22251 Avicennia marina
MSTRG.3446 Avicennia marina
Nitab4.5_0001373g0010 Nicotiana tabacum
Nitab4.5_0001984g0110 Nicotiana tabacum
Nitab4.5_0002578g0030 Nicotiana tabacum
Nitab4.5_0007681g0010 Nicotiana tabacum
Nn5g30424 Nelumbo nucifera
Oeu013260.3 Olea europaea
Oeu037164.1 Olea europaea
Os04g0101100 Oryza sativa ssp. japonica
Os04g0101300 Oryza sativa ssp. japonica
Os11g0545600 Oryza sativa ssp. japonica
Peaxi162Scf00266g00098 Petunia axillaris
Peaxi162Scf00945g00215 Petunia axillaris
PGR004G1569 Punica granatum
PGR083G2469 Punica granatum
PGSC0003DMG400003312 Solanum tuberosum
PGSC0003DMG400024952 Solanum tuberosum
Phvul.003G239950 Phaseolus vulgaris
Phvul.009G068400 Phaseolus vulgaris
Potri.002G122500 Populus trichocarpa
Potri.007G049300 Populus trichocarpa
Potri.014G022400 Populus trichocarpa
Pp3c11_2210 Physcomitrium patens
Pp3c7_24000 Physcomitrium patens
PRCOL_00001072 Prasinoderma coloniale
PRCOL_00004030 Prasinoderma coloniale
Prupe.1G429500 Prunus persica
Prupe.6G228700 Prunus persica
Psat4g082600 Pisum sativum
Psat5g040480 Pisum sativum
PSO013G0071 Papaver somniferum
PSO170G3656 Papaver somniferum
PSO210G1707 Papaver somniferum
PSO832G0699 Papaver somniferum
QL02p003467 Quercus lobata
QL02p003491 Quercus lobata
QL02p003600 Quercus lobata
QL06p040039 Quercus lobata
RcHm_v2.0_Chr2g0106701 Rosa chinensis
RcHm_v2.0_Chr2g0106721 Rosa chinensis
RcHm_v2.0_Chr6g0308521 Rosa chinensis
RcHm_v2.0_Chr6g0308621 Rosa chinensis
Rhsim06G0056500 Rhododendron simsii
Rhsim06G0056800 Rhododendron simsii
Rhsim10G0111800 Rhododendron simsii
Rhsim10G0111900 Rhododendron simsii
Sabra07G0043800 Salix brachista
Sabra14G0014800 Salix brachista
SalBow5G0517 Salvia bowleyana
SalBow5G0895 Salvia bowleyana
SalBow6G3321 Salvia bowleyana
Sc03g0001880 Simmondsia chinensis
Sc15g0005830 Simmondsia chinensis
Sed0000616 Sechium edule
Sed0011866 Sechium edule
SGA_v2.0_scaffold28G11788 Striga asiatica
SHI15273 Sapria himalayana
SHI15277 Sapria himalayana
SHI15279 Sapria himalayana
SMO119G0471 Selaginella moellendorffii
SMO358G0104 Selaginella moellendorffii
SMO358G0539 Selaginella moellendorffii
Solyc02g092910.3 Solanum lycopersicum
Solyc04g078400.3 Solanum lycopersicum
Sopen02g037470 Solanum pennellii
Sopen04g032010 Solanum pennellii
Sp1g01720 Schrenkiella parvula
Sp7g34940 Schrenkiella parvula
TAR381G0449 Trochodendron aralioides
TAR381G1307 Trochodendron aralioides
TAR625G0979 Trochodendron aralioides
THA.LOC104804199 Tarenaya hassleriana
THA.LOC104812581 Tarenaya hassleriana
Thecc.01G063800 Theobroma cacao
Thecc.08G095900 Theobroma cacao
Thhalv10008162m.g Eutrema salsugineum
Thhalv10025747m.g Eutrema salsugineum
TPR.G23902 Trifolium pratense
TPR.G25596 Trifolium pratense
TWI53G1439 Tripterygium wilfordii
unitig_22.g6768 Utricularia gibba
unitig_22.g6769 Utricularia gibba
unitig_748.g7265 Utricularia gibba
vmacro05249 Vaccinium macrocarpon
vmacro21477 Vaccinium macrocarpon
VMungo0251G1374 Vigna mungo
VMungo1309G0676 Vigna mungo
VMungo1383G3419 Vigna mungo
Zm00001eb236910 Zea mays

User provided reference genes

Program Settings