Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27900 Brassica napus
Aa31LG4G7780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1815 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1752 Anthoceros agrestis
Actinidia03492 Actinidia chinensis
Actinidia21013 Actinidia chinensis
Actinidia25833 Actinidia chinensis
Actinidia26777 Actinidia chinensis
Actinidia26778 Actinidia chinensis
Actinidia29455 Actinidia chinensis
Ah.15g092740 Amaranthus hybridus
Ah.16g110070 Amaranthus hybridus
AL2G37870 Arabidopsis lyrata
Aqoxy2G02817 Aquilegia oxysepala
Aqoxy6G00169 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AUI3M2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IEN2V4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KF0JQ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2THLI Arachis hypogaea
AT1G77670 Arabidopsis thaliana
ATR0193G013 Amborella trichopoda
ATR0706G227 Amborella trichopoda
Atru.chr13.1411 Acer truncatum
Atru.chr5.1060 Acer truncatum
Atru.chr5.1061 Acer truncatum
AUR62004721 Chenopodium quinoa
AUR62008769 Chenopodium quinoa
AUR62008770 Chenopodium quinoa
AUR62023640 Chenopodium quinoa
AUR62025468 Chenopodium quinoa
AUR62025469 Chenopodium quinoa
BcaB02g07124 Brassica carinata
BcaC08g45463 Brassica carinata
BcaC08g47597 Brassica carinata
BolC6t38252H Brassica oleracea
BolC6t40186H Brassica oleracea
BolC6t40189H Brassica oleracea
BraA07t30429Z Brassica rapa
C06p30900 Brassica napus
C06p51670 Brassica napus
CAN.G1209.21 Capsicum annuum
CAN.G684.1 Capsicum annuum
CANSAT01G1398 Cannabis sativa
CANSAT25G0283 Cannabis sativa
CARHR071170 Cardamine hirsuta
Carub.0002s2455 Capsella rubella
Ca_10306_v3 Cicer arietinum L.
Ca_13582_v3 Cicer arietinum L.
CBR_g30246 Chara braunii
CBR_g46732 Chara braunii
Cc07_g15250 Coffea canephora
Cc10_g10990 Coffea canephora
Cc11_g04000 Coffea canephora
CDE04G0137 Ceratophyllum demersum
CDE04G2451 Ceratophyllum demersum
CDE06G1056 Ceratophyllum demersum
CDE08G0606 Ceratophyllum demersum
CDE08G0975 Ceratophyllum demersum
CDE12G0497 Ceratophyllum demersum
Cfa015991 Carpinus fangiana
Ciclev10001202m.g Citrus clementina
CiPaw.05G224300 Carya illinoinensis
CiPaw.06G027100 Carya illinoinensis
CiPaw.07G114500 Carya illinoinensis
ClCG09G005300 Citrullus lanatus
ClCG11G015610 Citrullus lanatus
COL.COLO4_02329 Corchorus olitorius
COL.COLO4_12196 Corchorus olitorius
COL.COLO4_23274 Corchorus olitorius
Cpa.g.sc151.54 Carica papaya
Cpa.g.sc36.33 Carica papaya
Cre01.g034050 Chlamydomonas reinhardtii
Cre01.g047850 Chlamydomonas reinhardtii
CsaV3_4G028410 Cucumis sativus L.
CsaV3_7G029770 Cucumis sativus L.
CSS0000545 Camellia sinensis var. sinensis
CSS0003589 Camellia sinensis var. sinensis
CSS0008454 Camellia sinensis var. sinensis
CSS0024164 Camellia sinensis var. sinensis
CSS0034380 Camellia sinensis var. sinensis
DCAR_012361 Daucus carota
DCAR_017393 Daucus carota
Dinv33096 Davidia involucrata
Duzib041G0449 Durio zibethinus
Duzib093G0434 Durio zibethinus
Duzib138G1237 Durio zibethinus
ECA232G1713 Erigeron canadensis
ECA236G0232 Erigeron canadensis
EL10Ac1g00010 Beta vulgaris
EL10Ac7g17655 Beta vulgaris
Eucgr.F03770 Eucalyptus grandis
Eucgr.F04439 Eucalyptus grandis
Eucgr.F04444 Eucalyptus grandis
Eucgr.F04446 Eucalyptus grandis
FAN08G3574 Fragaria x ananassa
FAN15G1170 Fragaria x ananassa
FAN18G1026 Fragaria x ananassa
FAN18G3442 Fragaria x ananassa
FAN20G0941 Fragaria x ananassa
FAN24G1042 Fragaria x ananassa
FAN27G0833 Fragaria x ananassa
FvH4_2g26550 Fragaria vesca
FvH4_5g39650 Fragaria vesca
Glyma.02G014800 Glycine max
Glyma.04G251800 Glycine max
Glyma.06G110851 Glycine max
Glyma.06G110900 Glycine max
Glyma.06G111000 Glycine max
Glyma.10G015400 Glycine max
Gohir.A02G073900 Gossypium hirsutum
Gohir.A09G213900 Gossypium hirsutum
Gohir.D02G081100 Gossypium hirsutum
Gohir.D09G216400 Gossypium hirsutum
Gorai.005G090600 Gossypium raimondii
Gorai.006G236900 Gossypium raimondii
GSVIVG01008900001 Vitis vinifera
GSVIVG01028080001 Vitis vinifera
HanXRQChr06g0167801 Helianthus annuus
HanXRQChr16g0512081 Helianthus annuus
Haze_00476 Corylus avellana
Haze_05001 Corylus avellana
Hma1.2p1_0248F.1_g102000 Hydrangea macrophylla
HPP92_002300 Vanilla planifolia
HPP92_025191 Vanilla planifolia
Hund16843 Selenicereus undatus
Hund18252 Selenicereus undatus
Lalb_Chr00c21g0406171 Lupinus albus
Lalb_Chr00c21g0406181 Lupinus albus
Lalb_Chr00c21g0406191 Lupinus albus
Lalb_Chr04g0253361 Lupinus albus
Lalb_Chr08g0241551 Lupinus albus
Lalb_Chr11g0065781 Lupinus albus
Lalb_Chr21g0309431 Lupinus albus
Lj1A20T48 Lonicera japonica
Lj1g0001363 Lotus japonicus
Lj1g0027977 Lotus japonicus
Lj5g0017537 Lotus japonicus
Lj7P336T24 Lonicera japonica
Lj7P336T26 Lonicera japonica
Lsat_1_v5_gn_7_11140 Lactuca sativa
Lsat_1_v5_gn_9_48821 Lactuca sativa
Manes.01G225000 Manihot esculenta
Manes.02G161200 Manihot esculenta
Manes.18G075400 Manihot esculenta
Mapoly0001s0440 Marchantia polymorpha
Mapoly0162s0009 Marchantia polymorpha
MBI03_g33016_MAGBIO Magnolia biondii
MBI18_g24957_MAGBIO Magnolia biondii
MCO03G043 Micromonas commoda
MD08G1166900 Malus domestica
MD11G1317900 Malus domestica
MD15G1353000 Malus domestica
Medtr1g087760 Medicago truncatula
Medtr3g072670 Medicago truncatula
Medtr3g072680 Medicago truncatula
Medtr3g072690 Medicago truncatula
MELO3C010461.2 Cucumis melo
MELO3C015944.2 Cucumis melo
Migut.D00106 Erythranthe guttata
Migut.N03297 Erythranthe guttata
MSTRG.1459 Avicennia marina
MSTRG.25393 Avicennia marina
Nitab4.5_0000193g0010 Nicotiana tabacum
Nitab4.5_0003183g0010 Nicotiana tabacum
Nitab4.5_0006939g0010 Nicotiana tabacum
Nitab4.5_0008750g0030 Nicotiana tabacum
Nn4g25667 Nelumbo nucifera
Nn5g28186 Nelumbo nucifera
Oeu008444.1 Olea europaea
Oeu047939.1 Olea europaea
Os09g0453800 Oryza sativa ssp. japonica
Os10g0484700 Oryza sativa ssp. japonica
Peaxi162Scf00497g00022 Petunia axillaris
PGR031G2885 Punica granatum
PGR042G2991 Punica granatum
PGSC0003DMG400024037 Solanum tuberosum
PGSC0003DMG400029022 Solanum tuberosum
Phvul.007G216600 Phaseolus vulgaris
Phvul.009G122800 Phaseolus vulgaris
Phvul.009G122900 Phaseolus vulgaris
Potri.002G086000 Populus trichocarpa
Potri.005G175400 Populus trichocarpa
Potri.005G175600 Populus trichocarpa
Potri.014G124100 Populus trichocarpa
Pp3c15_17270 Physcomitrium patens
Pp3c1_16850 Physcomitrium patens
Pp3c2_23140 Physcomitrium patens
Pp3c6_20820 Physcomitrium patens
Pp3c8_3820 Physcomitrium patens
Pp3c9_3790 Physcomitrium patens
Prupe.1G501400 Prunus persica
Prupe.8G269100 Prunus persica
Psat5g120600 Pisum sativum
Psat5g120720 Pisum sativum
Psat6g162920 Pisum sativum
PSO170G0989 Papaver somniferum
PSO170G5242 Papaver somniferum
PSO782G3103 Papaver somniferum
PSO782G5453 Papaver somniferum
QL09p035793 Quercus lobata
QL12p028883 Quercus lobata
QL93p0218_0005 Quercus lobata
RcHm_v2.0_Chr6g0295421 Rosa chinensis
RcHm_v2.0_Chr7g0241961 Rosa chinensis
Rhsim01G0288900 Rhododendron simsii
RhsimUnG0094700 Rhododendron simsii
Sabra02G0067400 Salix brachista
Sabra14G0092200 Salix brachista
SalBow6G2716 Salvia bowleyana
SalBow7G3094 Salvia bowleyana
Sc01g0001340 Simmondsia chinensis
Sc24g0003710 Simmondsia chinensis
Sed0005010 Sechium edule
Sed0012903 Sechium edule
SEGI_01136 Sequoiadendron giganteum
SEGI_06257 Sequoiadendron giganteum
SEGI_21530 Sequoiadendron giganteum
SEGI_34458 Sequoiadendron giganteum
SEGI_38206 Sequoiadendron giganteum
SGA_v2.0_scaffold28G12012 Striga asiatica
SGA_v2.0_scaffold334G49049 Striga asiatica
SMO232G0007 Selaginella moellendorffii
SMO356G0091 Selaginella moellendorffii
Solyc11g013170.2 Solanum lycopersicum
Sopen11g008210 Solanum pennellii
Sp5g32840 Schrenkiella parvula
TAR381G0070 Trochodendron aralioides
TAR628G1341 Trochodendron aralioides
TAR633G1619 Trochodendron aralioides
THA.LOC104810152 Tarenaya hassleriana
Thecc.01G309100 Theobroma cacao
Thecc.08G121500 Theobroma cacao
Thhalv10018556m.g Eutrema salsugineum
TPR.G19776 Trifolium pratense
TPR.G19887 Trifolium pratense
TPR.G22986 Trifolium pratense
TPR.G5163 Trifolium pratense
TWI12G1110 Tripterygium wilfordii
TWI36G1696 Tripterygium wilfordii
TWI56G0575 Tripterygium wilfordii
unitig_22.g6733 Utricularia gibba
unitig_8.g3344 Utricularia gibba
vmacro00816 Vaccinium macrocarpon
vmacro15125 Vaccinium macrocarpon
VMungo0720G2009 Vigna mungo
VMungo1309G0624 Vigna mungo
VMungo1309G1294 Vigna mungo
Zm00001eb221410 Zea mays
Zm00001eb314710 Zea mays

User provided reference genes

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